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Cow genome map

           
Conread name:
           
Pig1-35E01
        

               
Conread position:
               
39-375
               

               
Cow position:
               
chr29:1615168-1614818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 194
               

               
Conread position:
               
56-194
               

               
Cow position:
               
chr29:34919237-34919379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
12, 116
               

               
Conread position:
               
57-551
               

               
Cow position:
               
chr29:35501441-35501926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 81
               

               
Conread position:
               
60-520
               

               
Cow position:
               
chr29:31593937-31594366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
37, 100
               

               
Conread position:
               
61-269
               

               
Cow position:
               
chr29:14577077-14576861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
26, 112
               

               
Conread position:
               
61-551
               

               
Cow position:
               
chr29:26017286-26017789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
65-542
               

               
Cow position:
               
chr29:26615524-26615998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 89
               

               
Conread position:
               
66-486
               

               
Cow position:
               
chr29:31489538-31489103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
31, 167
               

               
Conread position:
               
66-548
               

               
Cow position:
               
chr29:1933360-1933833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
31, 11
               

               
Conread position:
               
66-551
               

               
Cow position:
               
chr29:4874674-4875181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 80
               

               
Conread position:
               
67-509
               

               
Cow position:
               
chr29:3711592-3711146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
16, 168
               

               
Conread position:
               
68-551
               

               
Cow position:
               
chr29:16657905-16657413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 106
               

               
Conread position:
               
68-551
               

               
Cow position:
               
chr29:39111113-39111586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 29
               

               
Conread position:
               
69-317
               

               
Cow position:
               
chr29:39038059-39038314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
69-333
               

               
Cow position:
               
chr29:38979868-38980136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
22, 76
               

               
Conread position:
               
69-345
               

               
Cow position:
               
chr29:22166876-22167158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 73
               

               
Conread position:
               
69-353
               

               
Cow position:
               
chr29:20770555-20770258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
31, 164
               

               
Conread position:
               
69-376
               

               
Cow position:
               
chr29:1008031-1007708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 165
               

               
Conread position:
               
69-513
               

               
Cow position:
               
chr29:19949516-19949066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 157
               

               
Conread position:
               
69-522
               

               
Cow position:
               
chr29:24293083-24292626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
13, 65
               

               
Conread position:
               
69-527
               

               
Cow position:
               
chr29:34773537-34773987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 60
               

               
Conread position:
               
69-543
               

               
Cow position:
               
chr29:4121063-4120576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
44, 24
               

               
Conread position:
               
69-549
               

               
Cow position:
               
chr29:9709904-9709423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr29:5893057-5892569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 160
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr29:10839150-10838672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 181
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr29:22162053-22162535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 119
               

               
Conread position:
               
70-379
               

               
Cow position:
               
chr29:5046862-5046541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
70-462
               

               
Cow position:
               
chr29:10818250-10818627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 43
               

               
Conread position:
               
70-505
               

               
Cow position:
               
chr29:23698181-23697743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
13, 95
               

               
Conread position:
               
70-506
               

               
Cow position:
               
chr29:1395780-1395369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
237, 30
               

               
Conread position:
               
70-551
               

               
Cow position:
               
chr29:10058330-10058805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 106
               

               
Conread position:
               
71-454
               

               
Cow position:
               
chr29:41112681-41113043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 58
               

               
Conread position:
               
71-466
               

               
Cow position:
               
chr29:25092314-25091913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 102
               

               
Conread position:
               
71-507
               

               
Cow position:
               
chr29:22613630-22613195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 103
               

               
Conread position:
               
71-541
               

               
Cow position:
               
chr29:2623271-2623748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 148
               

               
Conread position:
               
71-541
               

               
Cow position:
               
chr29:12680367-12679886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 119
               

               
Conread position:
               
71-551
               

               
Cow position:
               
chr29:20626779-20626299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
26, 165
               

               
Conread position:
               
72-262
               

               
Cow position:
               
chr29:40350873-40351066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 136
               

               
Conread position:
               
72-268
               

               
Cow position:
               
chr29:15798157-15797955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 13
               

               
Conread position:
               
72-454
               

               
Cow position:
               
chr29:31674837-31674444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
40, 28
               

               
Conread position:
               
72-520
               

               
Cow position:
               
chr29:29769146-29769597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 104
               

               
Conread position:
               
72-551
               

               
Cow position:
               
chr29:45005425-45005894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
73-520
               

               
Cow position:
               
chr29:32963730-32963303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 40
               

               
Conread position:
               
74-285
               

               
Cow position:
               
chr29:36781104-36781317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
23, 69
               

               
Conread position:
               
75-287
               

               
Cow position:
               
chr29:9378840-9378622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
75-346
               

               
Cow position:
               
chr29:36952107-36952378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
25, 108
               

               
Conread position:
               
75-431
               

               
Cow position:
               
chr29:17297343-17296968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 155
               

               
Conread position:
               
75-551
               

               
Cow position:
               
chr29:17110158-17109690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 97
               

               
Conread position:
               
76-443
               

               
Cow position:
               
chr29:31944070-31943688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
76-551
               

               
Cow position:
               
chr29:28775263-28775732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
83, 148
               

               
Conread position:
               
77-551
               

               
Cow position:
               
chr29:14501798-14501316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
20, 158
               

               
Conread position:
               
78-551
               

               
Cow position:
               
chr29:28196818-28197286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
79-333
               

               
Cow position:
               
chr29:44139045-44139311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 18
               

               
Conread position:
               
80-283
               

               
Cow position:
               
chr29:19363908-19363700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
17, 146
               

               
Conread position:
               
80-313
               

               
Cow position:
               
chr29:26540340-26540579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
17, 153
               

               
Conread position:
               
80-357
               

               
Cow position:
               
chr29:21666286-21665998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
17, 147
               

               
Conread position:
               
80-454
               

               
Cow position:
               
chr29:37618508-37618123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
17, 155
               

               
Conread position:
               
80-504
               

               
Cow position:
               
chr29:23845040-23844597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
17, 155
               

               
Conread position:
               
80-506
               

               
Cow position:
               
chr29:4520530-4520099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 16
               

               
Conread position:
               
80-516
               

               
Cow position:
               
chr29:3502762-3502309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
80-519
               

               
Cow position:
               
chr29:25737220-25737667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr29:699428-699887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr29:2744069-2744550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 114
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr29:19762463-19761994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 94
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr29:26779077-26778610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
8, 86
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr29:35630211-35630694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
18, 100
               

               
Conread position:
               
81-462
               

               
Cow position:
               
chr29:28979317-28979670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
16, 74
               

               
Conread position:
               
81-551
               

               
Cow position:
               
chr29:5063342-5062854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 150
               

               
Conread position:
               
81-551
               

               
Cow position:
               
chr29:36531065-36530585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 151
               

               
Conread position:
               
82-291
               

               
Cow position:
               
chr29:29308384-29308591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
15, 74
               

               
Conread position:
               
82-321
               

               
Cow position:
               
chr29:23155433-23155174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 160
               

               
Conread position:
               
82-365
               

               
Cow position:
               
chr29:7624363-7624079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
82-551
               

               
Cow position:
               
chr29:19125528-19125082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
15, 159
               

               
Conread position:
               
82-551
               

               
Cow position:
               
chr29:28195335-28195797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 100
               

               
Conread position:
               
83-306
               

               
Cow position:
               
chr29:28066677-28066459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
14, 85
               

               
Conread position:
               
83-542
               

               
Cow position:
               
chr29:40117762-40117296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 65
               

               
Conread position:
               
83-551
               

               
Cow position:
               
chr29:43328829-43328359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
84-551
               

               
Cow position:
               
chr29:34745465-34745932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
13, 49
               

               
Conread position:
               
87-268
               

               
Cow position:
               
chr29:15796675-15796489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
87-551
               

               
Cow position:
               
chr29:21000842-21000361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
88-551
               

               
Cow position:
               
chr29:21443149-21443622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
9, 25
               

               
Conread position:
               
96-304
               

               
Cow position:
               
chr29:17804713-17804502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
16, 124
               

               
Conread position:
               
96-341
               

               
Cow position:
               
chr29:29324237-29324487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 153
               

               
Conread position:
               
96-362
               

               
Cow position:
               
chr29:32197877-32197615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
15, 74
               

               
Conread position:
               
96-506
               

               
Cow position:
               
chr29:13639186-13639603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
43, 16
               

               
Conread position:
               
99-296
               

               
Cow position:
               
chr29:22723776-22723577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
96, 129
               

               
Conread position:
               
99-312
               

               
Cow position:
               
chr29:23825032-23825252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
13, 126
               

               
Conread position:
               
99-506
               

               
Cow position:
               
chr29:36586749-36586342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
12, 138
               

               
Conread position:
               
99-551
               

               
Cow position:
               
chr29:34359646-34360072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
13, 56
               

               
Conread position:
               
104-462
               

               
Cow position:
               
chr29:3100093-3100452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
31, 127
               

               
Conread position:
               
107-421
               

               
Cow position:
               
chr29:7425800-7425482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
42, 123
               

               
Conread position:
               
108-327
               

               
Cow position:
               
chr29:742502-742700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
108-484
               

               
Cow position:
               
chr29:30441107-30440711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 123
               

               
Conread position:
               
111-333
               

               
Cow position:
               
chr29:32176833-32176614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
179, 49
               

               
Conread position:
               
114-454
               

               
Cow position:
               
chr29:9718613-9718955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
25, 50
               

               
Conread position:
               
116-542
               

               
Cow position:
               
chr29:40337384-40337793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
31, 56
               

               
Conread position:
               
120-452
               

               
Cow position:
               
chr29:28166068-28166398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
132-520
               

               
Cow position:
               
chr29:1557073-1556681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 95
               

               
Conread position:
               
137-312
               

               
Cow position:
               
chr29:31200394-31200218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
25, 35
               

               
Conread position:
               
137-333
               

               
Cow position:
               
chr29:40874147-40873943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
61, 30
               

               
Conread position:
               
137-343
               

               
Cow position:
               
chr29:23220363-23220577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
23, 88
               

               
Conread position:
               
137-449
               

               
Cow position:
               
chr29:27589058-27588743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
62, 34
               

               
Conread position:
               
137-481
               

               
Cow position:
               
chr29:26653907-26654252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
137-551
               

               
Cow position:
               
chr29:86875-87295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 48
               

               
Conread position:
               
137-551
               

               
Cow position:
               
chr29:4480038-4480452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 25
               

               
Conread position:
               
137-551
               

               
Cow position:
               
chr29:32290747-32290324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
43, 91
               

               
Conread position:
               
138-551
               

               
Cow position:
               
chr29:29975171-29974765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 24
               

               
Conread position:
               
139-423
               

               
Cow position:
               
chr29:29314527-29314810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
150, 32
               

               
Conread position:
               
139-502
               

               
Cow position:
               
chr29:29512008-29512370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 45
               

               
Conread position:
               
139-506
               

               
Cow position:
               
chr29:22714589-22714964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 92
               

               
Conread position:
               
139-520
               

               
Cow position:
               
chr29:8926328-8926710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
139-539
               

               
Cow position:
               
chr29:40298887-40299279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
59, 29
               

               
Conread position:
               
139-550
               

               
Cow position:
               
chr29:10156169-10156566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
41, 89
               

               
Conread position:
               
139-551
               

               
Cow position:
               
chr29:749772-750176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
44, 86
               

               
Conread position:
               
139-551
               

               
Cow position:
               
chr29:16609881-16609460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 38
               

               
Conread position:
               
140-462
               

               
Cow position:
               
chr29:5186356-5186689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
28, 7
               

               
Conread position:
               
140-544
               

               
Cow position:
               
chr29:26672783-26673174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
140-551
               

               
Cow position:
               
chr29:4624867-4625271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
45, 32
               

               
Conread position:
               
141-444
               

               
Cow position:
               
chr29:23243747-23244057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 30
               

               
Conread position:
               
141-495
               

               
Cow position:
               
chr29:38581111-38580752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 26
               

               
Conread position:
               
141-539
               

               
Cow position:
               
chr29:22175811-22175427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
46, 8
               

               
Conread position:
               
142-542
               

               
Cow position:
               
chr29:19339131-19338710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 35
               

               
Conread position:
               
143-371
               

               
Cow position:
               
chr29:18085703-18085468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
44, 86
               

               
Conread position:
               
144-333
               

               
Cow position:
               
chr29:38978661-38978464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
28, 82
               

               
Conread position:
               
154-405
               

               
Cow position:
               
chr29:4003010-4002759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
45, 13
               

               
Conread position:
               
154-416
               

               
Cow position:
               
chr29:29176499-29176761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
44, 8
               

               
Conread position:
               
159-521
               

               
Cow position:
               
chr29:20903177-20903540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 18
               

               
Conread position:
               
160-511
               

               
Cow position:
               
chr29:26987041-26986701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
163-551
               

               
Cow position:
               
chr29:17607527-17607138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
176-518
               

               
Cow position:
               
chr29:23983857-23984213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 51
               

               
Conread position:
               
185-504
               

               
Cow position:
               
chr29:41747537-41747206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 91
               

               
Conread position:
               
186-496
               

               
Cow position:
               
chr29:868860-868546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
187-346
               

               
Cow position:
               
chr29:18012640-18012476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
109, 29
               

               
Conread position:
               
190-551
               

               
Cow position:
               
chr29:7407825-7408167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
158, 17
               

               
Conread position:
               
191-520
               

               
Cow position:
               
chr29:19389556-19389235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
194-440
               

               
Cow position:
               
chr29:44682029-44682269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
196-406
               

               
Cow position:
               
chr29:27329966-27329754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
102, 26
               

               
Conread position:
               
196-520
               

               
Cow position:
               
chr29:40166317-40165991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
102, 26
               

               
Conread position:
               
197-548
               

               
Cow position:
               
chr29:41811517-41811852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
6, 26
               

               
Conread position:
               
198-508
               

               
Cow position:
               
chr29:24103469-24103787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
5, 25
               

               
Conread position:
               
202-513
               

               
Cow position:
               
chr29:26985294-26984984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
68, 28
               

               
Conread position:
               
202-520
               

               
Cow position:
               
chr29:356388-356075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
32, 22
               

               
Conread position:
               
207-503
               

               
Cow position:
               
chr29:19253767-19254056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
195, 17
               

               
Conread position:
               
214-506
               

               
Cow position:
               
chr29:18735582-18735879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
51, 42
               

               
Conread position:
               
219-542
               

               
Cow position:
               
chr29:12451428-12451098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
51, 27
               

               
Conread position:
               
220-517
               

               
Cow position:
               
chr29:19792225-19792528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
89, 56
               

               
Conread position:
               
226-431
               

               
Cow position:
               
chr29:1124700-1124492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
79, 44
               

               
Conread position:
               
233-551
               

               
Cow position:
               
chr29:12004724-12005042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
73, 38
               

               
Conread position:
               
246-551
               

               
Cow position:
               
chr29:3503067-3502781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
46, 24
               

               
Conread position:
               
264-551
               

               
Cow position:
               
chr29:7040841-7041113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
275-551
               

               
Cow position:
               
chr29:8125591-8125871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
23, 228
               

               
Conread position:
               
275-551
               

               
Cow position:
               
chr29:26735026-26734755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
28, 55
               

               
Conread position:
               
284-551
               

               
Cow position:
               
chr29:26335393-26335656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
176, 18
               

               
Conread position:
               
291-520
               

               
Cow position:
               
chr29:44135484-44135712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 22
               

               
Conread position:
               
292-553
               

               
Cow position:
               
chr29:9195144-9195405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
158, 229
               

               
Conread position:
               
296-520
               

               
Cow position:
               
chr29:34736496-34736716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
68, 131
               

               
Conread position:
               
298-537
               

               
Cow position:
               
chr29:295852-296083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
162, 79
               

               
Conread position:
               
298-542
               

               
Cow position:
               
chr29:42268665-42268422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
65, 72
               

               
Conread position:
               
298-548
               

               
Cow position:
               
chr29:4066057-4065814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
8, 150
               

               
Conread position:
               
299-451
               

               
Cow position:
               
chr29:7393069-7392915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
300-525
               

               
Cow position:
               
chr29:16359583-16359359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
65, 44
               

               
Conread position:
               
300-541
               

               
Cow position:
               
chr29:41182742-41182983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
88, 220
               

               
Conread position:
               
302-505
               

               
Cow position:
               
chr29:6472280-6472080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
156, 13
               

               
Conread position:
               
302-551
               

               
Cow position:
               
chr29:44232985-44233227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
154, 9
               

               
Conread position:
               
302-551
               

               
Cow position:
               
chr29:44310060-44310306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
85, 149
               

               
Conread position:
               
303-490
               

               
Cow position:
               
chr29:5109239-5109431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 67
               

               
Conread position:
               
303-504
               

               
Cow position:
               
chr29:42886352-42886146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
305-541
               

               
Cow position:
               
chr29:9139376-9139134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
73, 114
               

               
Conread position:
               
305-542
               

               
Cow position:
               
chr29:2984851-2984618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
84, 123
               

               
Conread position:
               
316-543
               

               
Cow position:
               
chr29:13634349-13634570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
48, 75
               

               
Conread position:
               
334-551
               

               
Cow position:
               
chr29:17135780-17135573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
126, 88
               

               
Conread position:
               
345-551
               

               
Cow position:
               
chr29:17181-17383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
160, 113
               

               
Conread position:
               
361-551
               

               
Cow position:
               
chr29:29066333-29066148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
99, 65
               
Show alignments to all cow chromosomes.