Cow genome map

Conread name: Pig1-35E01

Conread position: 35-551
Cow position: chr5:65753134-65752608 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 18

Conread position: 44-549
Cow position: chr5:59081927-59082441 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 345
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 42, 192

Conread position: 59-520
Cow position: chr5:28324607-28324121 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 324
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 38, 21

Conread position: 61-487
Cow position: chr5:69461574-69461144 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 18

Conread position: 64-466
Cow position: chr5:45472518-45472096 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 292
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 160, 34

Conread position: 65-341
Cow position: chr5:63192508-63192788 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 210
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 14, 103

Conread position: 66-312
Cow position: chr5:45186877-45187128 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 32, 14

Conread position: 66-328
Cow position: chr5:26548901-26549175 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 205
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 31, 76

Conread position: 66-487
Cow position: chr5:4322656-4322220 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 287
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 6, 224

Conread position: 66-505
Cow position: chr5:4280687-4280255 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 307
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 20, 168

Conread position: 66-520
Cow position: chr5:21829106-21828640 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 367

Conread position: 66-551
Cow position: chr5:58519172-58519650 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 344
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 13, 168

Conread position: 67-246
Cow position: chr5:29599313-29599493 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 29

Conread position: 67-328
Cow position: chr5:8736035-8736323 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 205
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 170

Conread position: 67-329
Cow position: chr5:73253645-73253381 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 25

Conread position: 67-422
Cow position: chr5:12434776-12434409 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 253
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 30, 76

Conread position: 67-492
Cow position: chr5:34562251-34561813 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 66

Conread position: 67-517
Cow position: chr5:53835962-53835493 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 216

Conread position: 67-551
Cow position: chr5:28945839-28946310 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 324
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 46, 100

Conread position: 67-551
Cow position: chr5:35145574-35145099 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 339
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 30, 20

Conread position: 68-261
Cow position: chr5:12562519-12562722 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 108

Conread position: 68-375
Cow position: chr5:46681482-46681793 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 215
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 18, 43

Conread position: 68-376
Cow position: chr5:43370949-43371276 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 221
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 171

Conread position: 68-412
Cow position: chr5:33560498-33560851 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 238
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 30, 75

Conread position: 68-520
Cow position: chr5:57074097-57074559 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 41

Conread position: 68-540
Cow position: chr5:32975320-32975791 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 331
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 29, 12

Conread position: 69-285
Cow position: chr5:26147827-26147606 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 40, 156

Conread position: 69-372
Cow position: chr5:57755795-57756108 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 201
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 28, 123

Conread position: 69-374
Cow position: chr5:30233145-30232824 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 11

Conread position: 69-406
Cow position: chr5:60016400-60016056 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 247
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 43, 18

Conread position: 69-429
Cow position: chr5:991712-991332 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 11

Conread position: 69-440
Cow position: chr5:66582209-66581818 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 264
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 28, 216

Conread position: 69-482
Cow position: chr5:52668278-52667841 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 291
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 28, 131

Conread position: 69-492
Cow position: chr5:44446635-44447082 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 80

Conread position: 69-520
Cow position: chr5:15364108-15363666 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 11

Conread position: 69-534
Cow position: chr5:24995980-24996458 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 166

Conread position: 69-538
Cow position: chr5:26467865-26467382 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 11

Conread position: 69-551
Cow position: chr5:35826830-35826339 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 38

Conread position: 69-551
Cow position: chr5:45225582-45226080 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 338
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 26, 32

Conread position: 69-551
Cow position: chr5:62107245-62107746 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 322
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 28, 166

Conread position: 70-406
Cow position: chr5:42670635-42670967 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 235
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 27, 104

Conread position: 70-440
Cow position: chr5:70951656-70952021 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 17

Conread position: 70-518
Cow position: chr5:56028308-56028752 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 16

Conread position: 70-520
Cow position: chr5:25495116-25495562 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 19

Conread position: 70-539
Cow position: chr5:38833352-38832878 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 75

Conread position: 70-542
Cow position: chr5:47602048-47601575 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 163

Conread position: 70-551
Cow position: chr5:30276924-30276444 (view UCSC Genome Browser custom track)
Alignm length: 496
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 16

Conread position: 71-287
Cow position: chr5:75227973-75228186 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 15, 96

Conread position: 71-288
Cow position: chr5:55942142-55942367 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 41, 33

Conread position: 71-387
Cow position: chr5:36038767-36039096 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 248
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 57

Conread position: 71-538
Cow position: chr5:16893543-16894014 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 25

Conread position: 71-539
Cow position: chr5:30845342-30844873 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 16

Conread position: 71-551
Cow position: chr5:44796499-44796969 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 330
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 26, 67

Conread position: 71-551
Cow position: chr5:55177117-55176641 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 322
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 26, 94

Conread position: 72-243
Cow position: chr5:21721240-21721414 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 20

Conread position: 72-276
Cow position: chr5:35190342-35190134 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 25, 100

Conread position: 72-306
Cow position: chr5:50824819-50824586 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 25, 71

Conread position: 72-429
Cow position: chr5:3549569-3549918 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 249
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 25, 99

Conread position: 73-311
Cow position: chr5:39036019-39035771 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 174
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 144

Conread position: 73-475
Cow position: chr5:44028073-44028480 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 14

Conread position: 73-481
Cow position: chr5:46512533-46512951 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 157

Conread position: 73-541
Cow position: chr5:35685168-35684687 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 36

Conread position: 75-425
Cow position: chr5:7057164-7057537 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 250
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 22, 162

Conread position: 75-492
Cow position: chr5:7044472-7044905 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 160

Conread position: 75-551
Cow position: chr5:5110857-5111328 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 28

Conread position: 75-551
Cow position: chr5:45845457-45845944 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 102

Conread position: 75-551
Cow position: chr5:74643452-74643912 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 5

Conread position: 77-287
Cow position: chr5:51246906-51247118 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 32

Conread position: 77-339
Cow position: chr5:69099950-69099674 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 20, 156

Conread position: 77-506
Cow position: chr5:11427005-11427451 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 98

Conread position: 77-506
Cow position: chr5:62172629-62172209 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 36

Conread position: 78-551
Cow position: chr5:64321992-64321497 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 163

Conread position: 79-551
Cow position: chr5:29903314-29903773 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 59

Conread position: 80-282
Cow position: chr5:54312827-54312619 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 32, 16

Conread position: 80-304
Cow position: chr5:22795434-22795213 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 179
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 17, 60

Conread position: 80-304
Cow position: chr5:51298487-51298715 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 17, 146

Conread position: 80-357
Cow position: chr5:59626744-59627036 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 220
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 17, 152

Conread position: 80-437
Cow position: chr5:19335549-19335932 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 255
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 157

Conread position: 80-449
Cow position: chr5:35459068-35459445 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 256
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 18, 147

Conread position: 80-454
Cow position: chr5:42050772-42050392 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 65

Conread position: 80-490
Cow position: chr5:34976613-34977031 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 281
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 24, 149

Conread position: 80-501
Cow position: chr5:30628926-30629358 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 17

Conread position: 80-517
Cow position: chr5:16025255-16025682 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 302
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 17, 87

Conread position: 80-525
Cow position: chr5:44847799-44848246 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 311
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 17, 99

Conread position: 80-549
Cow position: chr5:57934892-57935362 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 64

Conread position: 80-551
Cow position: chr5:9893897-9894378 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 153

Conread position: 80-551
Cow position: chr5:19278475-19278944 (view UCSC Genome Browser custom track)
Alignm length: 488
Alignm identity: 328
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 17, 158

Conread position: 80-551
Cow position: chr5:21617683-21617204 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 88

Conread position: 80-551
Cow position: chr5:56524390-56523923 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 68

Conread position: 80-551
Cow position: chr5:65941022-65941504 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 153

Conread position: 80-551
Cow position: chr5:66257862-66257391 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 151

Conread position: 81-311
Cow position: chr5:34914827-34915064 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 17, 151

Conread position: 81-503
Cow position: chr5:3582782-3582378 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 302
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 19, 84

Conread position: 81-520
Cow position: chr5:56071084-56070629 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 11

Conread position: 81-551
Cow position: chr5:30303108-30302647 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 119

Conread position: 81-551
Cow position: chr5:61726184-61725719 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 95

Conread position: 82-247
Cow position: chr5:37253649-37253481 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 82

Conread position: 82-374
Cow position: chr5:20288033-20288350 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 238
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 15, 10

Conread position: 82-376
Cow position: chr5:43403135-43402819 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 113

Conread position: 82-382
Cow position: chr5:33834266-33833957 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 208
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 15, 131

Conread position: 82-397
Cow position: chr5:56548792-56548476 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 218
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 148

Conread position: 82-462
Cow position: chr5:30092402-30092793 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 259
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 15, 47

Conread position: 82-462
Cow position: chr5:41009784-41010160 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 269
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 15, 103

Conread position: 82-496
Cow position: chr5:23168604-23169018 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 93

Conread position: 82-501
Cow position: chr5:50942939-50943359 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 13

Conread position: 82-540
Cow position: chr5:25035028-25035467 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 82-549
Cow position: chr5:3492411-3491952 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 319
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 15, 123

Conread position: 83-464
Cow position: chr5:54060492-54060108 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 259
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 43

Conread position: 83-517
Cow position: chr5:11229446-11229895 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 47

Conread position: 83-551
Cow position: chr5:35763469-35763039 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 57

Conread position: 84-404
Cow position: chr5:14920702-14921039 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 13, 153

Conread position: 84-440
Cow position: chr5:12760896-12761261 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 239
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 147

Conread position: 84-539
Cow position: chr5:30253964-30253502 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 94

Conread position: 84-542
Cow position: chr5:40109708-40109259 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 64

Conread position: 84-551
Cow position: chr5:14314740-14314271 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 107

Conread position: 84-551
Cow position: chr5:39447301-39447786 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 159

Conread position: 84-551
Cow position: chr5:56467894-56467453 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 327
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 16, 40

Conread position: 86-308
Cow position: chr5:69383473-69383247 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 168
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 11, 82

Conread position: 87-428
Cow position: chr5:22667291-22666960 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 247
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 10, 145

Conread position: 91-365
Cow position: chr5:12654694-12654970 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 5

Conread position: 91-551
Cow position: chr5:50600261-50599815 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 5

Conread position: 92-455
Cow position: chr5:47696244-47696599 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 242
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 5, 51

Conread position: 96-330
Cow position: chr5:51065726-51065496 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 16, 91

Conread position: 96-338
Cow position: chr5:72006286-72006536 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 188
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 16, 43

Conread position: 96-376
Cow position: chr5:17554824-17555112 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 212
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 16, 116

Conread position: 96-452
Cow position: chr5:45397776-45397425 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 266
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 16, 69

Conread position: 96-454
Cow position: chr5:12673269-12673620 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 80

Conread position: 96-517
Cow position: chr5:68719078-68718662 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 298
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 15, 33

Conread position: 96-542
Cow position: chr5:20779188-20779625 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 318
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 14, 76

Conread position: 96-551
Cow position: chr5:29828259-29827802 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 136

Conread position: 96-551
Cow position: chr5:42064418-42063952 (view UCSC Genome Browser custom track)
Alignm length: 481
Alignm identity: 321
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 16, 138

Conread position: 96-551
Cow position: chr5:45706247-45705796 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 308
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 140

Conread position: 96-553
Cow position: chr5:37646286-37645809 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 317
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 14, 175

Conread position: 99-467
Cow position: chr5:16214889-16214519 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 249
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 27, 127

Conread position: 99-551
Cow position: chr5:34050316-34049858 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 315
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 12, 80

Conread position: 100-517
Cow position: chr5:15721881-15722275 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 81

Conread position: 100-551
Cow position: chr5:64523657-64524133 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 325
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 12, 131

Conread position: 103-301
Cow position: chr5:38169094-38168893 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 57, 65

Conread position: 103-462
Cow position: chr5:6286248-6286590 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 250
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 58, 0

Conread position: 104-551
Cow position: chr5:26377480-26377918 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 75

Conread position: 108-436
Cow position: chr5:64026819-64027149 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 241
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 31, 127

Conread position: 108-440
Cow position: chr5:56877666-56877343 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 232
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 199, 44

Conread position: 108-533
Cow position: chr5:36855391-36854979 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 286
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 47, 32

Conread position: 108-542
Cow position: chr5:54350175-54350603 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 293
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 197, 62

Conread position: 108-551
Cow position: chr5:12351617-12352033 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 51

Conread position: 109-377
Cow position: chr5:66551697-66551981 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 32, 70

Conread position: 109-551
Cow position: chr5:64139752-64139312 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 15

Conread position: 112-551
Cow position: chr5:26990572-26990142 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 294
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 87, 27

Conread position: 113-336
Cow position: chr5:17602014-17602242 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 26, 62

Conread position: 114-551
Cow position: chr5:66366699-66366280 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 311
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 59, 29

Conread position: 118-551
Cow position: chr5:7193599-7193181 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 303
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 73, 49

Conread position: 120-405
Cow position: chr5:60183984-60183691 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 215
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 78, 19

Conread position: 125-533
Cow position: chr5:6683198-6683581 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 276
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 20, 56

Conread position: 127-520
Cow position: chr5:12710057-12709662 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 269
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 57

Conread position: 128-541
Cow position: chr5:37814803-37814382 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 269
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 27, 10

Conread position: 130-520
Cow position: chr5:74016114-74015716 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 266
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 7, 128

Conread position: 131-551
Cow position: chr5:60715197-60715606 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 290
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 56, 90

Conread position: 132-541
Cow position: chr5:56385385-56384986 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 264
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 17, 79

Conread position: 134-366
Cow position: chr5:63234664-63234897 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 53, 28

Conread position: 135-505
Cow position: chr5:64758605-64758972 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 260
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 52, 11

Conread position: 137-406
Cow position: chr5:7698167-7697894 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 193
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 28, 138

Conread position: 137-413
Cow position: chr5:49440710-49440990 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 199
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 12, 32

Conread position: 137-540
Cow position: chr5:49685113-49685521 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 288
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 9, 26

Conread position: 137-541
Cow position: chr5:68605020-68604618 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 275
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 8, 92

Conread position: 137-547
Cow position: chr5:55966720-55967137 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 31

Conread position: 137-551
Cow position: chr5:50533225-50533635 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 297
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 62, 23

Conread position: 137-551
Cow position: chr5:52165016-52165433 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 25

Conread position: 137-551
Cow position: chr5:58856267-58855847 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 90

Conread position: 138-486
Cow position: chr5:52040161-52040509 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 235
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 24

Conread position: 138-551
Cow position: chr5:33662008-33661603 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 284
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 47, 38

Conread position: 139-333
Cow position: chr5:31052542-31052347 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 87

Conread position: 139-352
Cow position: chr5:40242205-40241985 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 68, 28

Conread position: 139-406
Cow position: chr5:58446969-58446692 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 45, 28

Conread position: 139-406
Cow position: chr5:60599038-60599296 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 31, 82

Conread position: 139-425
Cow position: chr5:44726170-44726456 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 31, 89

Conread position: 139-481
Cow position: chr5:61810932-61810608 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 245
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 29

Conread position: 139-551
Cow position: chr5:4166803-4166419 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 294
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 21, 31

Conread position: 139-551
Cow position: chr5:16205994-16206393 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 299
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 60, 32

Conread position: 139-551
Cow position: chr5:67932309-67932714 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 88

Conread position: 140-341
Cow position: chr5:56338861-56339066 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 57, 31

Conread position: 141-361
Cow position: chr5:67212519-67212290 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 83

Conread position: 141-551
Cow position: chr5:50821946-50821537 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 88

Conread position: 142-542
Cow position: chr5:43929578-43929976 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 29

Conread position: 142-551
Cow position: chr5:44752149-44752563 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 279
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 45, 26

Conread position: 144-539
Cow position: chr5:44993893-44994282 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 276
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 54, 31

Conread position: 145-441
Cow position: chr5:20422036-20422325 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 53, 82

Conread position: 146-400
Cow position: chr5:62378934-62378686 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 25

Conread position: 147-551
Cow position: chr5:41545740-41546141 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 24

Conread position: 147-551
Cow position: chr5:44053901-44054289 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 22

Conread position: 148-495
Cow position: chr5:57575925-57575567 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 253
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 50, 34

Conread position: 149-374
Cow position: chr5:69636377-69636156 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 49, 72

Conread position: 149-490
Cow position: chr5:50215413-50215752 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 49, 28

Conread position: 150-376
Cow position: chr5:54375352-54375588 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 49, 22

Conread position: 151-470
Cow position: chr5:14629663-14629988 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 233
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 20, 7

Conread position: 153-333
Cow position: chr5:35982588-35982779 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 73

Conread position: 153-427
Cow position: chr5:54767762-54768042 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 41, 15

Conread position: 155-479
Cow position: chr5:47323607-47323268 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 234
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 19, 30

Conread position: 158-551
Cow position: chr5:58793461-58793866 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 71

Conread position: 162-521
Cow position: chr5:27411261-27411615 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 250
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 23, 70

Conread position: 162-551
Cow position: chr5:17028235-17027847 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 267
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 15, 73

Conread position: 163-369
Cow position: chr5:28035881-28035666 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 65

Conread position: 164-549
Cow position: chr5:6045434-6045037 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 64

Conread position: 166-358
Cow position: chr5:26150286-26150484 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 16, 60

Conread position: 172-542
Cow position: chr5:28927464-28927835 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 262
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 26, 55

Conread position: 179-441
Cow position: chr5:65883651-65883922 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 189
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 11, 46

Conread position: 179-486
Cow position: chr5:48009736-48010036 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 219
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 19, 48

Conread position: 179-506
Cow position: chr5:45804182-45803851 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 47

Conread position: 185-551
Cow position: chr5:63964053-63964432 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 258
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 32, 88

Conread position: 187-551
Cow position: chr5:15598128-15598485 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 20

Conread position: 191-488
Cow position: chr5:74610596-74610883 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 200
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 196, 31

Conread position: 191-551
Cow position: chr5:12149652-12149295 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 256
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 76, 9

Conread position: 193-551
Cow position: chr5:31640529-31640176 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 25

Conread position: 196-435
Cow position: chr5:7755468-7755702 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 26, 0

Conread position: 196-520
Cow position: chr5:32696722-32697037 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 240
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 93, 16

Conread position: 196-551
Cow position: chr5:43457430-43457767 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 246
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 264, 50

Conread position: 197-541
Cow position: chr5:26046422-26046093 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 240
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 167, 10

Conread position: 199-529
Cow position: chr5:72173124-72172790 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 222
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 68, 10

Conread position: 200-506
Cow position: chr5:740843-741156 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 219
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 86, 22

Conread position: 201-446
Cow position: chr5:63865891-63865644 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 179
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 95, 21

Conread position: 202-466
Cow position: chr5:62638999-62638736 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 103, 29

Conread position: 202-551
Cow position: chr5:34288381-34288721 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 35

Conread position: 203-551
Cow position: chr5:20407584-20407914 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 247
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 135, 19

Conread position: 204-551
Cow position: chr5:27102701-27103044 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 232
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 85, 18

Conread position: 211-517
Cow position: chr5:55821460-55821148 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 173
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 81, 213

Conread position: 211-551
Cow position: chr5:28330255-28330583 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 236
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 17, 71

Conread position: 212-520
Cow position: chr5:46122266-46122573 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 204
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 78, 58

Conread position: 213-551
Cow position: chr5:39094636-39094302 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 234
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 174, 58

Conread position: 214-551
Cow position: chr5:31144702-31145033 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 82, 55

Conread position: 214-551
Cow position: chr5:65932858-65933179 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 236
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 164, 59

Conread position: 216-516
Cow position: chr5:31434337-31434045 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 198
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 98, 12

Conread position: 217-519
Cow position: chr5:64823228-64823536 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 224
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 17, 138

Conread position: 219-417
Cow position: chr5:50799614-50799418 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 73, 51

Conread position: 219-496
Cow position: chr5:68264878-68265163 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 188
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 81, 50

Conread position: 219-513
Cow position: chr5:63185174-63185469 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 210
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 142

Conread position: 219-520
Cow position: chr5:68872274-68871968 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 219
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 72, 21

Conread position: 219-551
Cow position: chr5:34638964-34638634 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 51

Conread position: 219-551
Cow position: chr5:47313553-47313222 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 232
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 45, 85

Conread position: 219-551
Cow position: chr5:62826670-62827006 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 7

Conread position: 222-489
Cow position: chr5:74003558-74003820 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 183
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 21

Conread position: 223-374
Cow position: chr5:73418214-73418362 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 223-501
Cow position: chr5:35449312-35449049 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 199
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 241, 48

Conread position: 225-541
Cow position: chr5:42744860-42744552 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 223
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 64, 45

Conread position: 241-542
Cow position: chr5:54713673-54713980 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 205
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 49, 30

Conread position: 242-506
Cow position: chr5:35235652-35235918 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 192
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 58, 29

Conread position: 242-551
Cow position: chr5:4506908-4507212 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 145, 39

Conread position: 243-520
Cow position: chr5:3627096-3627392 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 219
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 55, 27

Conread position: 250-506
Cow position: chr5:60126422-60126164 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 193
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 58, 20

Conread position: 250-551
Cow position: chr5:4797274-4797562 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 214
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 206, 21

Conread position: 251-551
Cow position: chr5:6086512-6086813 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 19

Conread position: 253-551
Cow position: chr5:27015726-27015441 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 17

Conread position: 257-551
Cow position: chr5:34916173-34915891 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 13

Conread position: 268-542
Cow position: chr5:34115685-34115420 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 196
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 155

Conread position: 269-430
Cow position: chr5:38647386-38647224 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 33, 147

Conread position: 269-551
Cow position: chr5:19470159-19470434 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 210
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 29, 49

Conread position: 271-551
Cow position: chr5:58460368-58460656 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 204
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 33, 259

Conread position: 274-520
Cow position: chr5:9859685-9859942 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 93

Conread position: 278-551
Cow position: chr5:64393178-64392903 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 189
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 24, 247

Conread position: 283-542
Cow position: chr5:26562169-26561906 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 17, 95

Conread position: 286-502
Cow position: chr5:6896119-6896332 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 172, 10

Conread position: 288-550
Cow position: chr5:49559175-49558909 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 194
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 14, 35

Conread position: 291-542
Cow position: chr5:52000228-51999977 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 190
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 17, 232

Conread position: 292-551
Cow position: chr5:1398075-1398341 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 186
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 67, 229

Conread position: 292-551
Cow position: chr5:55430643-55430384 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 177
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 96, 225

Conread position: 295-506
Cow position: chr5:29212943-29212739 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 40

Conread position: 295-543
Cow position: chr5:72150249-72150007 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 187
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 16, 144

Conread position: 295-551
Cow position: chr5:59443252-59443502 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 194
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 10, 19

Conread position: 296-533
Cow position: chr5:57127013-57126782 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 17, 84

Conread position: 296-538
Cow position: chr5:32956097-32956332 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 226, 134

Conread position: 300-535
Cow position: chr5:51357506-51357743 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 11

Conread position: 300-551
Cow position: chr5:59876737-59876989 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 176

Conread position: 301-549
Cow position: chr5:55942403-55942646 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 191
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 163, 17

Conread position: 303-538
Cow position: chr5:60520155-60519928 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 11, 105

Conread position: 304-543
Cow position: chr5:45940623-45940850 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 55

Conread position: 304-545
Cow position: chr5:6987154-6986913 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 58, 71

Conread position: 305-483
Cow position: chr5:17644665-17644842 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 128

Conread position: 305-505
Cow position: chr5:57271275-57271473 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 113

Conread position: 305-520
Cow position: chr5:40356875-40357094 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 77, 0

Conread position: 305-535
Cow position: chr5:45037011-45036785 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 172
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 155, 125

Conread position: 305-539
Cow position: chr5:56433794-56433562 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 170
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 132, 200

Conread position: 305-551
Cow position: chr5:54404901-54405145 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 77, 109

Conread position: 306-522
Cow position: chr5:54111912-54111692 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 7, 110

Conread position: 306-551
Cow position: chr5:30816708-30816464 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 183
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 82, 95

Conread position: 307-506
Cow position: chr5:40039782-40039980 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 153, 100

Conread position: 307-542
Cow position: chr5:58144613-58144848 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 167
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 82, 122

Conread position: 311-519
Cow position: chr5:5848205-5848410 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 116

Conread position: 311-551
Cow position: chr5:50975883-50975636 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 204

Conread position: 316-541
Cow position: chr5:2332531-2332755 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 87

Conread position: 322-520
Cow position: chr5:12672057-12672251 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 182, 92

Conread position: 326-541
Cow position: chr5:50864333-50864125 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 131, 37

Conread position: 326-551
Cow position: chr5:69099501-69099275 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 173
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 129, 188

Conread position: 327-551
Cow position: chr5:37366869-37366639 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 129, 0

Conread position: 335-551
Cow position: chr5:63917450-63917661 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 125, 80

Show alignments to all cow chromosomes.