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Cow genome map

           
Conread name:
           
Pig1-35E01
        

               
Conread position:
               
42-542
               

               
Cow position:
               
chr8:18831995-18831482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
46-551
               

               
Cow position:
               
chr8:10336798-10337298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 40
               

               
Conread position:
               
52-480
               

               
Cow position:
               
chr8:27138561-27138987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
46, 17
               

               
Conread position:
               
61-345
               

               
Cow position:
               
chr8:55247361-55247657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
22, 158
               

               
Conread position:
               
61-477
               

               
Cow position:
               
chr8:23018283-23018709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 46
               

               
Conread position:
               
61-520
               

               
Cow position:
               
chr8:6724123-6724580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
51, 30
               

               
Conread position:
               
61-551
               

               
Cow position:
               
chr8:16938248-16938716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 106
               

               
Conread position:
               
62-296
               

               
Cow position:
               
chr8:3887559-3887321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
81, 15
               

               
Conread position:
               
62-375
               

               
Cow position:
               
chr8:46082395-46082072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
27, 105
               

               
Conread position:
               
62-409
               

               
Cow position:
               
chr8:33640597-33640234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 172
               

               
Conread position:
               
65-482
               

               
Cow position:
               
chr8:1012188-1011776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
27, 32
               

               
Conread position:
               
65-538
               

               
Cow position:
               
chr8:17199201-17199688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 171
               

               
Conread position:
               
65-551
               

               
Cow position:
               
chr8:28378538-28379040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
32, 169
               

               
Conread position:
               
66-338
               

               
Cow position:
               
chr8:36531370-36531661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
8, 175
               

               
Conread position:
               
66-376
               

               
Cow position:
               
chr8:53552899-53552582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
27, 166
               

               
Conread position:
               
66-421
               

               
Cow position:
               
chr8:12799149-12798791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 43
               

               
Conread position:
               
66-551
               

               
Cow position:
               
chr8:21220381-21219884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
31, 108
               

               
Conread position:
               
66-551
               

               
Cow position:
               
chr8:26626096-26625608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 12
               

               
Conread position:
               
67-309
               

               
Cow position:
               
chr8:5477630-5477876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
67-551
               

               
Cow position:
               
chr8:1304133-1303640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 108
               

               
Conread position:
               
68-498
               

               
Cow position:
               
chr8:35563563-35563112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
68-500
               

               
Cow position:
               
chr8:54303238-54302818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 106
               

               
Conread position:
               
68-551
               

               
Cow position:
               
chr8:46235930-46235436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 175
               

               
Conread position:
               
68-551
               

               
Cow position:
               
chr8:53230240-53229765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 96
               

               
Conread position:
               
69-258
               

               
Cow position:
               
chr8:35452796-35452600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
69-288
               

               
Cow position:
               
chr8:55194398-55194170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
29, 165
               

               
Conread position:
               
69-353
               

               
Cow position:
               
chr8:49305524-49305823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
14, 166
               

               
Conread position:
               
69-376
               

               
Cow position:
               
chr8:54177491-54177809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
28, 11
               

               
Conread position:
               
69-413
               

               
Cow position:
               
chr8:16413590-16413943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
31, 155
               

               
Conread position:
               
69-431
               

               
Cow position:
               
chr8:27731263-27730891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
69-467
               

               
Cow position:
               
chr8:43439829-43439421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
69-533
               

               
Cow position:
               
chr8:17179819-17180274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 116
               

               
Conread position:
               
69-535
               

               
Cow position:
               
chr8:8986705-8987187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
18, 180
               

               
Conread position:
               
69-541
               

               
Cow position:
               
chr8:47135799-47136267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
69-548
               

               
Cow position:
               
chr8:51661373-51661863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
19, 170
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr8:1188136-1187670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 103
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr8:24371505-24371983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 27
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr8:32620758-32621263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 31
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr8:38358646-38358159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 170
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr8:38572047-38572546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 108
               

               
Conread position:
               
69-551
               

               
Cow position:
               
chr8:52925509-52925986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 106
               

               
Conread position:
               
70-337
               

               
Cow position:
               
chr8:55089636-55089908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
30, 10
               

               
Conread position:
               
70-338
               

               
Cow position:
               
chr8:52773156-52772872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
27, 163
               

               
Conread position:
               
70-376
               

               
Cow position:
               
chr8:41721969-41722278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 108
               

               
Conread position:
               
70-378
               

               
Cow position:
               
chr8:44449384-44449695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
27, 100
               

               
Conread position:
               
70-430
               

               
Cow position:
               
chr8:33125712-33125357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
70-432
               

               
Cow position:
               
chr8:53338447-53338812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
70-506
               

               
Cow position:
               
chr8:11277883-11278339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
70-523
               

               
Cow position:
               
chr8:58636953-58636530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
27, 73
               

               
Conread position:
               
70-541
               

               
Cow position:
               
chr8:20107573-20108043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 16
               

               
Conread position:
               
70-550
               

               
Cow position:
               
chr8:28322192-28321710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
70-551
               

               
Cow position:
               
chr8:47170167-47169689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 160
               

               
Conread position:
               
70-551
               

               
Cow position:
               
chr8:48512807-48513273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
71-265
               

               
Cow position:
               
chr8:29173428-29173228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 154
               

               
Conread position:
               
71-448
               

               
Cow position:
               
chr8:58058962-58058574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
26, 105
               

               
Conread position:
               
71-520
               

               
Cow position:
               
chr8:9316117-9315671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
18, 26
               

               
Conread position:
               
71-546
               

               
Cow position:
               
chr8:42762215-42762687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 9
               

               
Conread position:
               
72-294
               

               
Cow position:
               
chr8:20910856-20911086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
72-311
               

               
Cow position:
               
chr8:55070933-55070690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
72-413
               

               
Cow position:
               
chr8:37391138-37391490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
26, 105
               

               
Conread position:
               
72-435
               

               
Cow position:
               
chr8:19716896-19717250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
72-439
               

               
Cow position:
               
chr8:37347226-37347615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 112
               

               
Conread position:
               
72-540
               

               
Cow position:
               
chr8:24867529-24868001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 15
               

               
Conread position:
               
72-551
               

               
Cow position:
               
chr8:55502796-55502327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 76
               

               
Conread position:
               
73-340
               

               
Cow position:
               
chr8:5730249-5729990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
27, 98
               

               
Conread position:
               
73-468
               

               
Cow position:
               
chr8:53633021-53633423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
24, 7
               

               
Conread position:
               
74-496
               

               
Cow position:
               
chr8:31297484-31297054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
75-296
               

               
Cow position:
               
chr8:40633650-40633878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 42
               

               
Conread position:
               
75-303
               

               
Cow position:
               
chr8:1177669-1177898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 67
               

               
Conread position:
               
75-462
               

               
Cow position:
               
chr8:8189841-8190246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 108
               

               
Conread position:
               
75-462
               

               
Cow position:
               
chr8:12214215-12213833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
75-549
               

               
Cow position:
               
chr8:12058944-12058449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
8, 156
               

               
Conread position:
               
75-551
               

               
Cow position:
               
chr8:10082100-10081659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
75-551
               

               
Cow position:
               
chr8:10971051-10970561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 5
               

               
Conread position:
               
76-329
               

               
Cow position:
               
chr8:5467867-5468142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 159
               

               
Conread position:
               
76-462
               

               
Cow position:
               
chr8:6951733-6951349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
77-387
               

               
Cow position:
               
chr8:6224227-6224542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 87
               

               
Conread position:
               
77-413
               

               
Cow position:
               
chr8:45446892-45447235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
62, 18
               

               
Conread position:
               
77-551
               

               
Cow position:
               
chr8:38894234-38893741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 164
               

               
Conread position:
               
78-376
               

               
Cow position:
               
chr8:52197242-52197555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 155
               

               
Conread position:
               
78-429
               

               
Cow position:
               
chr8:39807814-39807445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 201
               

               
Conread position:
               
78-550
               

               
Cow position:
               
chr8:25628541-25628082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 35
               

               
Conread position:
               
79-551
               

               
Cow position:
               
chr8:61537636-61538110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
18, 62
               

               
Conread position:
               
80-312
               

               
Cow position:
               
chr8:60339716-60339946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
80-336
               

               
Cow position:
               
chr8:5437973-5437705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
17, 72
               

               
Conread position:
               
80-362
               

               
Cow position:
               
chr8:18728993-18728703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
80-377
               

               
Cow position:
               
chr8:4203639-4203951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
17, 155
               

               
Conread position:
               
80-387
               

               
Cow position:
               
chr8:9402140-9401816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
11, 107
               

               
Conread position:
               
80-400
               

               
Cow position:
               
chr8:31985470-31985147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 25
               

               
Conread position:
               
80-431
               

               
Cow position:
               
chr8:34769710-34769354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 151
               

               
Conread position:
               
80-444
               

               
Cow position:
               
chr8:32332259-32332655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
17, 163
               

               
Conread position:
               
80-492
               

               
Cow position:
               
chr8:39181562-39181983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 147
               

               
Conread position:
               
80-497
               

               
Cow position:
               
chr8:4796958-4796568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 33
               

               
Conread position:
               
80-503
               

               
Cow position:
               
chr8:3976443-3975995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
17, 155
               

               
Conread position:
               
80-505
               

               
Cow position:
               
chr8:54032086-54031654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
17, 57
               

               
Conread position:
               
80-506
               

               
Cow position:
               
chr8:35504009-35504460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
18, 159
               

               
Conread position:
               
80-517
               

               
Cow position:
               
chr8:37215640-37215202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
17, 148
               

               
Conread position:
               
80-520
               

               
Cow position:
               
chr8:29029865-29030335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 64
               

               
Conread position:
               
80-542
               

               
Cow position:
               
chr8:33406646-33407094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 9
               

               
Conread position:
               
80-550
               

               
Cow position:
               
chr8:61157019-61157487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 92
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr8:3445885-3446345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
17, 152
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr8:16296553-16297025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 156
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr8:22274075-22273594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
17, 135
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr8:28229264-28229738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 149
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr8:32133476-32132986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 63
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr8:32854623-32855072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 91
               

               
Conread position:
               
80-551
               

               
Cow position:
               
chr8:36055204-36055671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
330, 15
               

               
Conread position:
               
81-338
               

               
Cow position:
               
chr8:18170789-18171076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 162
               

               
Conread position:
               
81-355
               

               
Cow position:
               
chr8:32130440-32130161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
81-366
               

               
Cow position:
               
chr8:16957822-16957544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 100
               

               
Conread position:
               
81-450
               

               
Cow position:
               
chr8:38711798-38711429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
16, 61
               

               
Conread position:
               
81-485
               

               
Cow position:
               
chr8:4500699-4500286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 81
               

               
Conread position:
               
81-520
               

               
Cow position:
               
chr8:37571492-37571946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 152
               

               
Conread position:
               
81-541
               

               
Cow position:
               
chr8:41914317-41914767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
16, 152
               

               
Conread position:
               
81-551
               

               
Cow position:
               
chr8:47751700-47752185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 148
               

               
Conread position:
               
82-249
               

               
Cow position:
               
chr8:47707311-47707479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 87
               

               
Conread position:
               
82-310
               

               
Cow position:
               
chr8:37559334-37559106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
15, 66
               

               
Conread position:
               
82-342
               

               
Cow position:
               
chr8:32278142-32278412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
82-419
               

               
Cow position:
               
chr8:29026449-29026775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
82-429
               

               
Cow position:
               
chr8:55885182-55884823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 91
               

               
Conread position:
               
82-469
               

               
Cow position:
               
chr8:19979879-19980267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
29, 14
               

               
Conread position:
               
82-520
               

               
Cow position:
               
chr8:35580429-35580868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 92
               

               
Conread position:
               
82-535
               

               
Cow position:
               
chr8:13661234-13660784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
82-536
               

               
Cow position:
               
chr8:55897608-55898046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 82
               

               
Conread position:
               
82-548
               

               
Cow position:
               
chr8:48527754-48528217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
82-551
               

               
Cow position:
               
chr8:23179321-23179812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 164
               

               
Conread position:
               
82-552
               

               
Cow position:
               
chr8:35972059-35971580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 92
               

               
Conread position:
               
83-308
               

               
Cow position:
               
chr8:58393767-58393539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
14, 91
               

               
Conread position:
               
83-334
               

               
Cow position:
               
chr8:37672237-37671989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
12, 6
               

               
Conread position:
               
83-463
               

               
Cow position:
               
chr8:37635787-37636170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 70
               

               
Conread position:
               
83-548
               

               
Cow position:
               
chr8:59250933-59250463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 82
               

               
Conread position:
               
83-551
               

               
Cow position:
               
chr8:11079060-11078604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
51, 25
               

               
Conread position:
               
84-462
               

               
Cow position:
               
chr8:61128493-61128884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 59
               

               
Conread position:
               
84-542
               

               
Cow position:
               
chr8:18057936-18057482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 8
               

               
Conread position:
               
86-551
               

               
Cow position:
               
chr8:58520491-58520034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
86-552
               

               
Cow position:
               
chr8:36375316-36375779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
89-439
               

               
Cow position:
               
chr8:46616586-46616254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
23, 7
               

               
Conread position:
               
95-541
               

               
Cow position:
               
chr8:18081724-18081277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
17, 47
               

               
Conread position:
               
96-296
               

               
Cow position:
               
chr8:34059967-34060173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 135
               

               
Conread position:
               
96-341
               

               
Cow position:
               
chr8:41219524-41219264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
96-353
               

               
Cow position:
               
chr8:20320681-20320419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
82, 43
               

               
Conread position:
               
96-519
               

               
Cow position:
               
chr8:10456657-10456230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 27
               

               
Conread position:
               
96-541
               

               
Cow position:
               
chr8:59766789-59766353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
16, 80
               

               
Conread position:
               
96-551
               

               
Cow position:
               
chr8:26651482-26651039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
14, 88
               

               
Conread position:
               
99-542
               

               
Cow position:
               
chr8:35583383-35583816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
99-551
               

               
Cow position:
               
chr8:61567180-61567633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 139
               

               
Conread position:
               
100-366
               

               
Cow position:
               
chr8:4525267-4524998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
100-517
               

               
Cow position:
               
chr8:1297702-1297280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
12, 123
               

               
Conread position:
               
100-541
               

               
Cow position:
               
chr8:6073629-6074053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 47
               

               
Conread position:
               
100-551
               

               
Cow position:
               
chr8:15394667-15395121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
11, 134
               

               
Conread position:
               
100-551
               

               
Cow position:
               
chr8:54052488-54052041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
103-551
               

               
Cow position:
               
chr8:47549760-47550202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 46
               

               
Conread position:
               
104-551
               

               
Cow position:
               
chr8:38356670-38357116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
40, 127
               

               
Conread position:
               
108-505
               

               
Cow position:
               
chr8:8097084-8097493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
31, 123
               

               
Conread position:
               
108-520
               

               
Cow position:
               
chr8:41626933-41627360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
36, 123
               

               
Conread position:
               
108-537
               

               
Cow position:
               
chr8:47328522-47328091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
36, 120
               

               
Conread position:
               
108-549
               

               
Cow position:
               
chr8:29765448-29764991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 213
               

               
Conread position:
               
109-551
               

               
Cow position:
               
chr8:3015660-3015199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 119
               

               
Conread position:
               
114-551
               

               
Cow position:
               
chr8:10400471-10400037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
64, 16
               

               
Conread position:
               
114-551
               

               
Cow position:
               
chr8:55716925-55716489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 54
               

               
Conread position:
               
126-448
               

               
Cow position:
               
chr8:4648725-4649055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
132-551
               

               
Cow position:
               
chr8:57389435-57389022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 13
               

               
Conread position:
               
133-303
               

               
Cow position:
               
chr8:33994396-33994226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 34
               

               
Conread position:
               
137-375
               

               
Cow position:
               
chr8:17167718-17167471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
137-547
               

               
Cow position:
               
chr8:37882493-37882063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
48, 40
               

               
Conread position:
               
137-551
               

               
Cow position:
               
chr8:28987849-28987454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 90
               

               
Conread position:
               
137-551
               

               
Cow position:
               
chr8:58876218-58875810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
61, 34
               

               
Conread position:
               
139-374
               

               
Cow position:
               
chr8:55871549-55871796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
139-387
               

               
Cow position:
               
chr8:14383053-14383296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
13, 57
               

               
Conread position:
               
139-400
               

               
Cow position:
               
chr8:54147812-54147544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
139-413
               

               
Cow position:
               
chr8:25388285-25388009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
48, 28
               

               
Conread position:
               
139-454
               

               
Cow position:
               
chr8:39174096-39174420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 32
               

               
Conread position:
               
139-491
               

               
Cow position:
               
chr8:15569337-15569670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
139-506
               

               
Cow position:
               
chr8:35991201-35990822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 93
               

               
Conread position:
               
139-509
               

               
Cow position:
               
chr8:16031431-16031798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 79
               

               
Conread position:
               
139-551
               

               
Cow position:
               
chr8:26386076-26386485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 28
               

               
Conread position:
               
139-551
               

               
Cow position:
               
chr8:40032673-40033084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 23
               

               
Conread position:
               
139-551
               

               
Cow position:
               
chr8:50709204-50708781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 89
               

               
Conread position:
               
140-296
               

               
Cow position:
               
chr8:43153545-43153701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 31
               

               
Conread position:
               
140-551
               

               
Cow position:
               
chr8:6531552-6531160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 59
               

               
Conread position:
               
140-551
               

               
Cow position:
               
chr8:11606468-11606070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
61, 30
               

               
Conread position:
               
141-551
               

               
Cow position:
               
chr8:29262932-29262516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 107
               

               
Conread position:
               
141-551
               

               
Cow position:
               
chr8:47664762-47665173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 75
               

               
Conread position:
               
142-539
               

               
Cow position:
               
chr8:32094017-32093625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 7
               

               
Conread position:
               
142-547
               

               
Cow position:
               
chr8:24471800-24471385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 8
               

               
Conread position:
               
143-538
               

               
Cow position:
               
chr8:38682020-38681626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 28
               

               
Conread position:
               
143-551
               

               
Cow position:
               
chr8:1253105-1252687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
30, 86
               

               
Conread position:
               
144-551
               

               
Cow position:
               
chr8:21077725-21077330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
145-472
               

               
Cow position:
               
chr8:28313580-28313915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 128
               

               
Conread position:
               
146-506
               

               
Cow position:
               
chr8:53214185-53214548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
25, 20
               

               
Conread position:
               
147-551
               

               
Cow position:
               
chr8:24202057-24201637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 79
               

               
Conread position:
               
148-551
               

               
Cow position:
               
chr8:33974694-33974308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
151-412
               

               
Cow position:
               
chr8:37334299-37334040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
139, 17
               

               
Conread position:
               
151-433
               

               
Cow position:
               
chr8:8577965-8577684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
48, 76
               

               
Conread position:
               
151-454
               

               
Cow position:
               
chr8:2931567-2931869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
44, 20
               

               
Conread position:
               
152-444
               

               
Cow position:
               
chr8:38137556-38137255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
152-520
               

               
Cow position:
               
chr8:25349846-25349469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
153-551
               

               
Cow position:
               
chr8:4924702-4924297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 77
               

               
Conread position:
               
153-551
               

               
Cow position:
               
chr8:33432391-33431990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
156-542
               

               
Cow position:
               
chr8:45831010-45830630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
42, 70
               

               
Conread position:
               
157-487
               

               
Cow position:
               
chr8:6484803-6485141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 20
               

               
Conread position:
               
159-526
               

               
Cow position:
               
chr8:29624841-29625209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 68
               

               
Conread position:
               
162-505
               

               
Cow position:
               
chr8:34288045-34287703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
15, 61
               

               
Conread position:
               
162-535
               

               
Cow position:
               
chr8:55305206-55304825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
23, 65
               

               
Conread position:
               
162-550
               

               
Cow position:
               
chr8:8134378-8134778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
15, 47
               

               
Conread position:
               
162-551
               

               
Cow position:
               
chr8:43027532-43027921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
37, 63
               

               
Conread position:
               
167-506
               

               
Cow position:
               
chr8:53558489-53558827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
31, 52
               

               
Conread position:
               
168-538
               

               
Cow position:
               
chr8:53362738-53363103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
27, 59
               

               
Conread position:
               
172-348
               

               
Cow position:
               
chr8:1843018-1843194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
172-353
               

               
Cow position:
               
chr8:7465438-7465258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
32, 18
               

               
Conread position:
               
176-548
               

               
Cow position:
               
chr8:31776297-31775920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
115, 46
               

               
Conread position:
               
180-551
               

               
Cow position:
               
chr8:554078-554452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 49
               

               
Conread position:
               
182-520
               

               
Cow position:
               
chr8:28294747-28295084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 40
               

               
Conread position:
               
184-541
               

               
Cow position:
               
chr8:10263067-10263423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
106, 38
               

               
Conread position:
               
186-490
               

               
Cow position:
               
chr8:31690905-31690593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
104, 21
               

               
Conread position:
               
187-430
               

               
Cow position:
               
chr8:37192459-37192219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
130, 35
               

               
Conread position:
               
190-507
               

               
Cow position:
               
chr8:59043006-59043327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
111, 32
               

               
Conread position:
               
191-533
               

               
Cow position:
               
chr8:43687645-43687288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
79, 31
               

               
Conread position:
               
191-551
               

               
Cow position:
               
chr8:18049685-18049337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
106, 31
               

               
Conread position:
               
191-551
               

               
Cow position:
               
chr8:59642404-59642766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
101, 29
               

               
Conread position:
               
194-431
               

               
Cow position:
               
chr8:29149777-29150023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
107, 28
               

               
Conread position:
               
194-542
               

               
Cow position:
               
chr8:49265214-49265566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
96, 22
               

               
Conread position:
               
195-462
               

               
Cow position:
               
chr8:57041743-57042001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
229, 27
               

               
Conread position:
               
196-516
               

               
Cow position:
               
chr8:2897530-2897856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
104, 29
               

               
Conread position:
               
196-520
               

               
Cow position:
               
chr8:32988827-32988506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
117, 28
               

               
Conread position:
               
196-526
               

               
Cow position:
               
chr8:20684058-20683727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 28
               

               
Conread position:
               
196-551
               

               
Cow position:
               
chr8:2814710-2814354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 26
               

               
Conread position:
               
198-539
               

               
Cow position:
               
chr8:17103342-17103673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 25
               

               
Conread position:
               
201-510
               

               
Cow position:
               
chr8:5980023-5979715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
201-537
               

               
Cow position:
               
chr8:3339160-3338837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 21
               

               
Conread position:
               
201-551
               

               
Cow position:
               
chr8:10297656-10298002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 21
               

               
Conread position:
               
202-512
               

               
Cow position:
               
chr8:31645942-31646238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
258, 12
               

               
Conread position:
               
202-541
               

               
Cow position:
               
chr8:9130848-9131183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
84, 20
               

               
Conread position:
               
202-551
               

               
Cow position:
               
chr8:9917963-9917626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
47, 20
               

               
Conread position:
               
203-520
               

               
Cow position:
               
chr8:37123044-37122732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
255, 19
               

               
Conread position:
               
204-374
               

               
Cow position:
               
chr8:1183139-1182969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
101, 20
               

               
Conread position:
               
204-551
               

               
Cow position:
               
chr8:33693584-33693232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
207-462
               

               
Cow position:
               
chr8:20150483-20150739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
107, 15
               

               
Conread position:
               
207-520
               

               
Cow position:
               
chr8:51904963-51905284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
82, 15
               

               
Conread position:
               
207-549
               

               
Cow position:
               
chr8:14947221-14947566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
99, 17
               

               
Conread position:
               
210-503
               

               
Cow position:
               
chr8:16487230-16487528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
54, 12
               

               
Conread position:
               
218-547
               

               
Cow position:
               
chr8:20355103-20355416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
78, 50
               

               
Conread position:
               
219-551
               

               
Cow position:
               
chr8:25579602-25579275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 50
               

               
Conread position:
               
222-375
               

               
Cow position:
               
chr8:12814947-12814789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
68, 48
               

               
Conread position:
               
224-462
               

               
Cow position:
               
chr8:39100905-39100663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
48, 41
               

               
Conread position:
               
233-541
               

               
Cow position:
               
chr8:55926251-55925942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 30
               

               
Conread position:
               
233-542
               

               
Cow position:
               
chr8:225316-225626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
65, 37
               

               
Conread position:
               
238-550
               

               
Cow position:
               
chr8:20354730-20355026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 18
               

               
Conread position:
               
238-551
               

               
Cow position:
               
chr8:39721714-39721399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 11
               

               
Conread position:
               
244-551
               

               
Cow position:
               
chr8:608058-608339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
216, 26
               

               
Conread position:
               
253-551
               

               
Cow position:
               
chr8:38465030-38464746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
207, 17
               

               
Conread position:
               
259-551
               

               
Cow position:
               
chr8:4563401-4563693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 11
               

               
Conread position:
               
261-413
               

               
Cow position:
               
chr8:6675171-6675014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
35, 9
               

               
Conread position:
               
269-517
               

               
Cow position:
               
chr8:1596155-1596408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
21, 53
               

               
Conread position:
               
269-542
               

               
Cow position:
               
chr8:10176135-10176401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
270-492
               

               
Cow position:
               
chr8:47679432-47679204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 104
               

               
Conread position:
               
273-547
               

               
Cow position:
               
chr8:2882071-2881800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
183, 141
               

               
Conread position:
               
274-502
               

               
Cow position:
               
chr8:4591073-4591293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
182, 24
               

               
Conread position:
               
274-542
               

               
Cow position:
               
chr8:57943337-57943606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
32, 145
               

               
Conread position:
               
275-534
               

               
Cow position:
               
chr8:34478130-34477865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
30, 251
               

               
Conread position:
               
277-551
               

               
Cow position:
               
chr8:3704624-3704356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
19, 132
               

               
Conread position:
               
278-539
               

               
Cow position:
               
chr8:3147540-3147792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
278-549
               

               
Cow position:
               
chr8:60774725-60774992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 69
               

               
Conread position:
               
286-541
               

               
Cow position:
               
chr8:39985746-39985993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
19, 92
               

               
Conread position:
               
288-539
               

               
Cow position:
               
chr8:46214079-46214325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
69, 10
               

               
Conread position:
               
289-517
               

               
Cow position:
               
chr8:28509491-28509728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
9, 83
               

               
Conread position:
               
289-547
               

               
Cow position:
               
chr8:39319792-39320046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 119
               

               
Conread position:
               
291-520
               

               
Cow position:
               
chr8:1834911-1834682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
87, 159
               

               
Conread position:
               
291-520
               

               
Cow position:
               
chr8:17669751-17669980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 24
               

               
Conread position:
               
291-520
               

               
Cow position:
               
chr8:57045507-57045738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 45
               

               
Conread position:
               
292-551
               

               
Cow position:
               
chr8:9624748-9624499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
295-543
               

               
Cow position:
               
chr8:31253797-31253552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
83, 134
               

               
Conread position:
               
298-515
               

               
Cow position:
               
chr8:32295748-32295973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
300-497
               

               
Cow position:
               
chr8:16023662-16023859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
78, 64
               

               
Conread position:
               
300-506
               

               
Cow position:
               
chr8:51493051-51493255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
301-457
               

               
Cow position:
               
chr8:54061253-54061095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
301-518
               

               
Cow position:
               
chr8:53587485-53587705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
73, 132
               

               
Conread position:
               
301-551
               

               
Cow position:
               
chr8:33994141-33993902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
302-490
               

               
Cow position:
               
chr8:37433604-37433413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
302-506
               

               
Cow position:
               
chr8:19818145-19818345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
158, 57
               

               
Conread position:
               
302-520
               

               
Cow position:
               
chr8:2953611-2953395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
7, 135
               

               
Conread position:
               
302-551
               

               
Cow position:
               
chr8:26961103-26960853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
86, 131
               

               
Conread position:
               
302-551
               

               
Cow position:
               
chr8:35989479-35989218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 221
               

               
Conread position:
               
304-519
               

               
Cow position:
               
chr8:28262944-28263155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
117, 60
               

               
Conread position:
               
304-544
               

               
Cow position:
               
chr8:44000513-44000747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 35
               

               
Conread position:
               
305-520
               

               
Cow position:
               
chr8:28412640-28412851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
77, 114
               

               
Conread position:
               
305-551
               

               
Cow position:
               
chr8:4821253-4821491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
305-551
               

               
Cow position:
               
chr8:9517203-9517447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
84, 116
               

               
Conread position:
               
305-551
               

               
Cow position:
               
chr8:24363965-24364201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
69, 127
               

               
Conread position:
               
305-551
               

               
Cow position:
               
chr8:35966054-35966298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 217
               

               
Conread position:
               
306-545
               

               
Cow position:
               
chr8:12303424-12303186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
83, 153
               

               
Conread position:
               
307-551
               

               
Cow position:
               
chr8:48437434-48437667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 70
               

               
Conread position:
               
307-553
               

               
Cow position:
               
chr8:56824044-56824294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 28
               

               
Conread position:
               
311-542
               

               
Cow position:
               
chr8:1473026-1472800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
149, 47
               

               
Conread position:
               
316-541
               

               
Cow position:
               
chr8:39039994-39039773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 99
               

               
Conread position:
               
317-542
               

               
Cow position:
               
chr8:10434771-10434551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
187, 145
               

               
Conread position:
               
319-550
               

               
Cow position:
               
chr8:18648123-18648352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
71, 162
               

               
Conread position:
               
320-541
               

               
Cow position:
               
chr8:50949736-50949518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
140, 185
               

               
Conread position:
               
324-545
               

               
Cow position:
               
chr8:54572601-54572386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
61, 131
               

               
Conread position:
               
334-550
               

               
Cow position:
               
chr8:3887310-3887094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 180
               

               
Conread position:
               
342-538
               

               
Cow position:
               
chr8:47861002-47861191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
118, 72
               

               
Conread position:
               
345-502
               

               
Cow position:
               
chr8:24905434-24905274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
363-551
               

               
Cow position:
               
chr8:834287-834099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
97, 150
               
Show alignments to all cow chromosomes.