Cow genome map
| Conread name: | Pig1-35E01 |
| Conread position: | 1-537 |
| Cow position: | chr9:5835899-5836456 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 320 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 96, 108 |
| Conread position: | 40-496 |
| Cow position: | chr9:58979192-58979655 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 150 |
| Conread position: | 44-552 |
| Cow position: | chr9:20847741-20848243 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 25 |
| Conread position: | 49-543 |
| Cow position: | chr9:17872307-17871808 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 40 |
| Conread position: | 60-412 |
| Cow position: | chr9:60395241-60394879 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 253 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 37, 173 |
| Conread position: | 62-454 |
| Cow position: | chr9:58614311-58614703 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 18 |
| Conread position: | 62-463 |
| Cow position: | chr9:48627832-48628251 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 221 |
| Conread position: | 62-551 |
| Cow position: | chr9:31346763-31347259 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 17 |
| Conread position: | 65-372 |
| Cow position: | chr9:34410582-34410264 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 17, 102 |
| Conread position: | 66-437 |
| Cow position: | chr9:12910582-12910202 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 14 |
| Conread position: | 66-460 |
| Cow position: | chr9:43048799-43048410 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 31, 11 |
| Conread position: | 66-537 |
| Cow position: | chr9:20090875-20091330 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 14 |
| Conread position: | 66-549 |
| Cow position: | chr9:55256737-55256246 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 102 |
| Conread position: | 66-551 |
| Cow position: | chr9:6192647-6192153 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 109 |
| Conread position: | 66-551 |
| Cow position: | chr9:13205747-13205264 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 19 |
| Conread position: | 66-551 |
| Cow position: | chr9:45285725-45285225 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 170 |
| Conread position: | 67-289 |
| Cow position: | chr9:11098636-11098412 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 30, 107 |
| Conread position: | 67-426 |
| Cow position: | chr9:20579773-20579420 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 99 |
| Conread position: | 67-551 |
| Cow position: | chr9:15806114-15805615 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 165 |
| Conread position: | 68-357 |
| Cow position: | chr9:58132135-58131847 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 20, 100 |
| Conread position: | 68-376 |
| Cow position: | chr9:1867286-1867585 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 211 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 46 |
| Conread position: | 68-376 |
| Cow position: | chr9:40005296-40005611 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 75, 21 |
| Conread position: | 68-387 |
| Cow position: | chr9:7952718-7953046 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 45 |
| Conread position: | 68-422 |
| Cow position: | chr9:8901417-8901042 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 21, 124 |
| Conread position: | 68-462 |
| Cow position: | chr9:53762514-53762919 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 77 |
| Conread position: | 68-551 |
| Cow position: | chr9:5227346-5226859 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 112 |
| Conread position: | 69-268 |
| Cow position: | chr9:19718517-19718316 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 29, 82 |
| Conread position: | 69-285 |
| Cow position: | chr9:42586729-42586516 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 31 |
| Conread position: | 69-295 |
| Cow position: | chr9:59699736-59699497 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 12, 45 |
| Conread position: | 69-303 |
| Cow position: | chr9:22466598-22466830 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 128, 90 |
| Conread position: | 69-307 |
| Cow position: | chr9:52763938-52763700 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 13, 95 |
| Conread position: | 69-357 |
| Cow position: | chr9:41785037-41785337 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 219 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 14, 75 |
| Conread position: | 69-376 |
| Cow position: | chr9:6189546-6189236 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 161 |
| Conread position: | 69-376 |
| Cow position: | chr9:13744115-13743797 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 43, 31 |
| Conread position: | 69-376 |
| Cow position: | chr9:32670129-32669812 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 222 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 28, 57 |
| Conread position: | 69-400 |
| Cow position: | chr9:39011649-39011317 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 11 |
| Conread position: | 69-409 |
| Cow position: | chr9:5263322-5263669 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 11 |
| Conread position: | 69-431 |
| Cow position: | chr9:19555206-19555565 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 271 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 28, 62 |
| Conread position: | 69-433 |
| Cow position: | chr9:41728076-41728448 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 207 |
| Conread position: | 69-462 |
| Cow position: | chr9:40303318-40302907 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 268 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 28, 105 |
| Conread position: | 69-515 |
| Cow position: | chr9:9403354-9402911 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 41 |
| Conread position: | 69-538 |
| Cow position: | chr9:44709650-44710114 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 323 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 43, 161 |
| Conread position: | 69-551 |
| Cow position: | chr9:20681588-20681100 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 10, 162 |
| Conread position: | 69-551 |
| Cow position: | chr9:28747701-28747216 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 106 |
| Conread position: | 70-287 |
| Cow position: | chr9:35832794-35832577 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 69, 30 |
| Conread position: | 70-506 |
| Cow position: | chr9:34286616-34287058 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 109 |
| Conread position: | 70-539 |
| Cow position: | chr9:45141780-45141324 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 85 |
| Conread position: | 70-541 |
| Cow position: | chr9:26279356-26278881 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 108 |
| Conread position: | 70-546 |
| Cow position: | chr9:7409595-7410083 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 340 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 28, 45 |
| Conread position: | 71-520 |
| Cow position: | chr9:59013519-59013056 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 320 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 26, 101 |
| Conread position: | 71-552 |
| Cow position: | chr9:38792835-38793326 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 21 |
| Conread position: | 72-276 |
| Cow position: | chr9:12129128-12129339 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 25, 138 |
| Conread position: | 72-485 |
| Cow position: | chr9:6839814-6840254 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 302 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 38, 24 |
| Conread position: | 72-487 |
| Cow position: | chr9:43757364-43757768 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 307 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 25, 69 |
| Conread position: | 72-551 |
| Cow position: | chr9:5500683-5501155 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 344 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 16, 71 |
| Conread position: | 72-551 |
| Cow position: | chr9:13169845-13169367 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 162 |
| Conread position: | 75-308 |
| Cow position: | chr9:52518998-52518760 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 22, 68 |
| Conread position: | 75-454 |
| Cow position: | chr9:61302826-61303217 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 104 |
| Conread position: | 75-539 |
| Cow position: | chr9:28726907-28726430 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 103 |
| Conread position: | 75-547 |
| Cow position: | chr9:8997380-8997858 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 317 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 22, 159 |
| Conread position: | 75-552 |
| Cow position: | chr9:50607107-50606646 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 100 |
| Conread position: | 77-339 |
| Cow position: | chr9:17840854-17840576 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 211 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 20, 156 |
| Conread position: | 77-357 |
| Cow position: | chr9:33584859-33584566 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 23, 96 |
| Conread position: | 78-551 |
| Cow position: | chr9:41679588-41680042 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 328 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 19, 65 |
| Conread position: | 80-261 |
| Cow position: | chr9:32052104-32052293 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 17, 152 |
| Conread position: | 80-261 |
| Cow position: | chr9:40984332-40984522 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 17, 95 |
| Conread position: | 80-268 |
| Cow position: | chr9:42508656-42508856 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 18, 106 |
| Conread position: | 80-328 |
| Cow position: | chr9:34024527-34024789 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 152 |
| Conread position: | 80-332 |
| Cow position: | chr9:37198955-37199215 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 196 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 17, 155 |
| Conread position: | 80-356 |
| Cow position: | chr9:3378590-3378868 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 199 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 18, 63 |
| Conread position: | 80-376 |
| Cow position: | chr9:33411743-33411440 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 17, 130 |
| Conread position: | 80-411 |
| Cow position: | chr9:26477040-26477387 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 17, 151 |
| Conread position: | 80-421 |
| Cow position: | chr9:11168573-11168911 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 17, 33 |
| Conread position: | 80-440 |
| Cow position: | chr9:4341328-4340970 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 86 |
| Conread position: | 80-486 |
| Cow position: | chr9:32815480-32815882 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 17, 152 |
| Conread position: | 80-496 |
| Cow position: | chr9:9596122-9595700 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 91 |
| Conread position: | 80-504 |
| Cow position: | chr9:34375098-34374667 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 12 |
| Conread position: | 80-514 |
| Cow position: | chr9:51620272-51620708 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 68 |
| Conread position: | 80-527 |
| Cow position: | chr9:41282840-41283310 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 320 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 17, 155 |
| Conread position: | 80-543 |
| Cow position: | chr9:10118838-10118365 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 129 |
| Conread position: | 80-548 |
| Cow position: | chr9:26345134-26344682 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 110 |
| Conread position: | 80-551 |
| Cow position: | chr9:3387544-3387997 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 318 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 17, 61 |
| Conread position: | 80-551 |
| Cow position: | chr9:5433473-5433937 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 63 |
| Conread position: | 80-551 |
| Cow position: | chr9:9443774-9443286 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 153 |
| Conread position: | 80-551 |
| Cow position: | chr9:19538928-19539403 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 145 |
| Conread position: | 80-551 |
| Cow position: | chr9:22318189-22318644 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 318 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 17, 33 |
| Conread position: | 80-551 |
| Cow position: | chr9:41416158-41416656 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 342 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 17, 155 |
| Conread position: | 80-551 |
| Cow position: | chr9:55795586-55796060 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 337 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 18, 103 |
| Conread position: | 81-304 |
| Cow position: | chr9:5104581-5104344 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 154 |
| Conread position: | 81-312 |
| Cow position: | chr9:57131327-57131560 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 16, 143 |
| Conread position: | 81-419 |
| Cow position: | chr9:40215076-40215422 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 17, 87 |
| Conread position: | 81-520 |
| Cow position: | chr9:24887034-24887476 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 152 |
| Conread position: | 81-551 |
| Cow position: | chr9:21460324-21459849 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 45 |
| Conread position: | 81-551 |
| Cow position: | chr9:28772970-28773423 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 86 |
| Conread position: | 81-551 |
| Cow position: | chr9:32676506-32676988 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 118 |
| Conread position: | 81-551 |
| Cow position: | chr9:61022448-61022916 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 187 |
| Conread position: | 82-277 |
| Cow position: | chr9:12773524-12773721 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 92 |
| Conread position: | 82-376 |
| Cow position: | chr9:36627952-36628239 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 215 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 8, 16 |
| Conread position: | 82-376 |
| Cow position: | chr9:52267932-52267621 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 228 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 16, 159 |
| Conread position: | 83-547 |
| Cow position: | chr9:11299842-11299395 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 80 |
| Conread position: | 83-551 |
| Cow position: | chr9:61738751-61739222 (view UCSC Genome Browser custom track) |
| Alignm length: | 490 |
| Alignm identity: | 325 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 10, 92 |
| Conread position: | 86-268 |
| Cow position: | chr9:24079139-24079326 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 11, 79 |
| Conread position: | 86-343 |
| Cow position: | chr9:43159589-43159844 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 11, 79 |
| Conread position: | 86-551 |
| Cow position: | chr9:5441845-5442295 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 56 |
| Conread position: | 86-551 |
| Cow position: | chr9:36491070-36490589 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 198 |
| Conread position: | 89-551 |
| Cow position: | chr9:33822956-33823397 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 89-551 |
| Cow position: | chr9:35167008-35167474 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 323 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 50, 7 |
| Conread position: | 90-357 |
| Cow position: | chr9:21080411-21080679 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 7, 48 |
| Conread position: | 92-362 |
| Cow position: | chr9:20466104-20465838 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 5, 82 |
| Conread position: | 92-467 |
| Cow position: | chr9:17799475-17799853 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 83 |
| Conread position: | 92-550 |
| Cow position: | chr9:22152242-22151783 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 74 |
| Conread position: | 92-551 |
| Cow position: | chr9:29006400-29006866 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 81 |
| Conread position: | 96-338 |
| Cow position: | chr9:29195187-29194925 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 16, 143 |
| Conread position: | 96-525 |
| Cow position: | chr9:55288044-55287607 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 305 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 16, 72 |
| Conread position: | 96-542 |
| Cow position: | chr9:42446141-42445688 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 315 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 38, 24 |
| Conread position: | 96-551 |
| Cow position: | chr9:29185295-29184828 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 318 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 30, 94 |
| Conread position: | 99-431 |
| Cow position: | chr9:30123778-30124111 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 44 |
| Conread position: | 99-462 |
| Cow position: | chr9:6338641-6339020 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 248 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 59, 132 |
| Conread position: | 99-513 |
| Cow position: | chr9:55117930-55118350 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 288 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 11, 139 |
| Conread position: | 100-441 |
| Cow position: | chr9:9815262-9815614 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 38, 126 |
| Conread position: | 100-491 |
| Cow position: | chr9:33120039-33119633 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 131 |
| Conread position: | 100-506 |
| Cow position: | chr9:8546190-8546582 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 100-542 |
| Cow position: | chr9:8950766-8951199 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 73, 43 |
| Conread position: | 104-484 |
| Cow position: | chr9:3185982-3186385 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 274 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 8, 67 |
| Conread position: | 104-551 |
| Cow position: | chr9:58452214-58451793 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 34 |
| Conread position: | 105-518 |
| Cow position: | chr9:10144628-10144195 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 133 |
| Conread position: | 108-461 |
| Cow position: | chr9:43623125-43623477 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 231 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 114 |
| Conread position: | 108-541 |
| Cow position: | chr9:52578678-52578237 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 11 |
| Conread position: | 108-545 |
| Cow position: | chr9:22443763-22443312 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 86, 54 |
| Conread position: | 108-551 |
| Cow position: | chr9:8937008-8937454 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 124 |
| Conread position: | 108-551 |
| Cow position: | chr9:34958192-34957746 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 51 |
| Conread position: | 109-551 |
| Cow position: | chr9:57897242-57896821 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 30 |
| Conread position: | 115-551 |
| Cow position: | chr9:64091554-64091993 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 10 |
| Conread position: | 117-410 |
| Cow position: | chr9:50202444-50202739 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 21, 109 |
| Conread position: | 124-520 |
| Cow position: | chr9:41513513-41513898 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 268 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 47, 15 |
| Conread position: | 125-442 |
| Cow position: | chr9:9654429-9654111 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 73, 82 |
| Conread position: | 125-551 |
| Cow position: | chr9:36445497-36445927 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 12 |
| Conread position: | 127-551 |
| Cow position: | chr9:44832172-44831751 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 128-376 |
| Cow position: | chr9:6596345-6596099 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 77, 33 |
| Conread position: | 128-552 |
| Cow position: | chr9:823839-824262 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 282 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 11, 92 |
| Conread position: | 133-486 |
| Cow position: | chr9:767266-766906 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 101 |
| Conread position: | 133-496 |
| Cow position: | chr9:51204614-51204979 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 39 |
| Conread position: | 133-520 |
| Cow position: | chr9:3070524-3070144 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 266 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 136-520 |
| Cow position: | chr9:37069667-37069290 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 269 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 54, 48 |
| Conread position: | 137-364 |
| Cow position: | chr9:53751062-53750834 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 62 |
| Conread position: | 137-475 |
| Cow position: | chr9:4268092-4267747 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 90 |
| Conread position: | 137-496 |
| Cow position: | chr9:3782258-3782617 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 42, 91 |
| Conread position: | 137-549 |
| Cow position: | chr9:9461764-9461353 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 281 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 62, 87 |
| Conread position: | 137-551 |
| Cow position: | chr9:17411301-17410883 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 286 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 42, 31 |
| Conread position: | 137-551 |
| Cow position: | chr9:23388781-23388370 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 35 |
| Conread position: | 137-551 |
| Cow position: | chr9:25964941-25964518 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 286 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 48, 19 |
| Conread position: | 138-344 |
| Cow position: | chr9:19758614-19758812 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 60, 24 |
| Conread position: | 139-296 |
| Cow position: | chr9:6293488-6293646 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 59, 28 |
| Conread position: | 139-313 |
| Cow position: | chr9:39758412-39758586 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 59, 32 |
| Conread position: | 139-440 |
| Cow position: | chr9:50543533-50543224 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 206 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 58, 45 |
| Conread position: | 139-461 |
| Cow position: | chr9:1938014-1938343 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 26, 141 |
| Conread position: | 139-480 |
| Cow position: | chr9:11319742-11319394 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 59, 82 |
| Conread position: | 139-506 |
| Cow position: | chr9:33597880-33598245 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 23 |
| Conread position: | 139-538 |
| Cow position: | chr9:17310668-17310269 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 285 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 46, 28 |
| Conread position: | 139-539 |
| Cow position: | chr9:19067678-19068091 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 301 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 59, 23 |
| Conread position: | 139-541 |
| Cow position: | chr9:9406159-9405759 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 297 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 59, 32 |
| Conread position: | 139-547 |
| Cow position: | chr9:10309106-10308705 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 289 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 31, 90 |
| Conread position: | 139-551 |
| Cow position: | chr9:1520845-1520423 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 23 |
| Conread position: | 139-551 |
| Cow position: | chr9:1949813-1950228 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 86 |
| Conread position: | 140-293 |
| Cow position: | chr9:55354506-55354659 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 59, 20 |
| Conread position: | 140-551 |
| Cow position: | chr9:33092851-33093250 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 285 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 41, 83 |
| Conread position: | 144-449 |
| Cow position: | chr9:3738325-3738013 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 226 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 53, 24 |
| Conread position: | 144-551 |
| Cow position: | chr9:5509634-5510030 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 23 |
| Conread position: | 144-551 |
| Cow position: | chr9:31079180-31078773 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 27 |
| Conread position: | 151-538 |
| Cow position: | chr9:40542042-40542412 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 273 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 153-520 |
| Cow position: | chr9:9625103-9624749 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 259 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 35, 9 |
| Conread position: | 155-439 |
| Cow position: | chr9:42037561-42037852 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 57 |
| Conread position: | 156-545 |
| Cow position: | chr9:5763719-5763330 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 68 |
| Conread position: | 162-350 |
| Cow position: | chr9:28754732-28754929 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 65 |
| Conread position: | 162-500 |
| Cow position: | chr9:5209498-5209841 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 234 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 28, 22 |
| Conread position: | 162-520 |
| Cow position: | chr9:18073181-18072839 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 264 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 35, 65 |
| Conread position: | 162-536 |
| Cow position: | chr9:34468663-34468302 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 259 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 9 |
| Conread position: | 163-551 |
| Cow position: | chr9:5219256-5218874 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 64 |
| Conread position: | 163-551 |
| Cow position: | chr9:38961512-38961131 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 37, 62 |
| Conread position: | 167-413 |
| Cow position: | chr9:60027117-60027370 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 31, 62 |
| Conread position: | 171-551 |
| Cow position: | chr9:46316857-46316482 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 36 |
| Conread position: | 180-520 |
| Cow position: | chr9:24997582-24997237 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 249 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 10, 39 |
| Conread position: | 181-391 |
| Cow position: | chr9:41486308-41486090 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 17, 45 |
| Conread position: | 184-551 |
| Cow position: | chr9:7634208-7634574 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 43 |
| Conread position: | 187-533 |
| Cow position: | chr9:11201535-11201867 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 101, 20 |
| Conread position: | 187-551 |
| Cow position: | chr9:39428854-39428506 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 242 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 82, 20 |
| Conread position: | 191-454 |
| Cow position: | chr9:49416936-49417197 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 107, 31 |
| Conread position: | 191-462 |
| Cow position: | chr9:44834014-44833747 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 106, 31 |
| Conread position: | 191-489 |
| Cow position: | chr9:61492981-61493274 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 195 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 196, 31 |
| Conread position: | 191-548 |
| Cow position: | chr9:7866023-7866368 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 187, 20 |
| Conread position: | 191-551 |
| Cow position: | chr9:31077721-31077372 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 256 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 187, 21 |
| Conread position: | 194-405 |
| Cow position: | chr9:49293191-49292981 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 38, 28 |
| Conread position: | 196-520 |
| Cow position: | chr9:20989504-20989175 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 48, 26 |
| Conread position: | 196-536 |
| Cow position: | chr9:6879733-6880061 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 184, 26 |
| Conread position: | 196-547 |
| Cow position: | chr9:22114681-22114331 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 254 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 94, 23 |
| Conread position: | 196-551 |
| Cow position: | chr9:23431193-23430841 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 27 |
| Conread position: | 196-551 |
| Cow position: | chr9:24872790-24873152 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 260 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 28 |
| Conread position: | 196-551 |
| Cow position: | chr9:35904791-35904445 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 255 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 106, 29 |
| Conread position: | 198-551 |
| Cow position: | chr9:44921445-44921106 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 251 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 5, 81 |
| Conread position: | 198-551 |
| Cow position: | chr9:63745770-63746110 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 5, 25 |
| Conread position: | 201-422 |
| Cow position: | chr9:43875760-43875540 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 95, 68 |
| Conread position: | 201-541 |
| Cow position: | chr9:41789243-41789578 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 84, 23 |
| Conread position: | 202-517 |
| Cow position: | chr9:19637668-19637363 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 216 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 68, 22 |
| Conread position: | 202-551 |
| Cow position: | chr9:28983143-28983490 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 240 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 88, 22 |
| Conread position: | 205-539 |
| Cow position: | chr9:35849866-35850192 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 240 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 101, 9 |
| Conread position: | 207-507 |
| Cow position: | chr9:29108500-29108802 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 208 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 63, 36 |
| Conread position: | 207-551 |
| Cow position: | chr9:35375391-35375727 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 83, 15 |
| Conread position: | 211-551 |
| Cow position: | chr9:31124962-31124617 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 78 |
| Conread position: | 212-540 |
| Cow position: | chr9:27310778-27310452 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 214-520 |
| Cow position: | chr9:47472656-47472975 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 222 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 58, 26 |
| Conread position: | 214-551 |
| Cow position: | chr9:38343860-38344201 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 25 |
| Conread position: | 214-551 |
| Cow position: | chr9:49983119-49982791 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 67 |
| Conread position: | 219-506 |
| Cow position: | chr9:6225479-6225188 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 78, 11 |
| Conread position: | 220-500 |
| Cow position: | chr9:34742748-34742470 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 78, 48 |
| Conread position: | 223-551 |
| Cow position: | chr9:22360989-22361318 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 47 |
| Conread position: | 230-541 |
| Cow position: | chr9:24850226-24850543 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 140 |
| Conread position: | 233-520 |
| Cow position: | chr9:10667036-10666746 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 59, 17 |
| Conread position: | 244-486 |
| Cow position: | chr9:30195214-30195455 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 246-504 |
| Cow position: | chr9:34919258-34919004 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 256-551 |
| Cow position: | chr9:21840084-21840381 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 49, 14 |
| Conread position: | 257-401 |
| Cow position: | chr9:42509129-42509275 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 271-551 |
| Cow position: | chr9:34666446-34666714 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 27, 85 |
| Conread position: | 272-506 |
| Cow position: | chr9:41652813-41653053 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 273-551 |
| Cow position: | chr9:62361207-62360923 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 33, 255 |
| Conread position: | 275-520 |
| Cow position: | chr9:60037680-60037934 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 27, 174 |
| Conread position: | 275-544 |
| Cow position: | chr9:4928662-4928928 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 275-551 |
| Cow position: | chr9:32812379-32812652 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 152 |
| Conread position: | 276-474 |
| Cow position: | chr9:31292720-31292920 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 22, 176 |
| Conread position: | 284-519 |
| Cow position: | chr9:58669418-58669657 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 90, 70 |
| Conread position: | 284-551 |
| Cow position: | chr9:27290246-27289975 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 231 |
| Conread position: | 285-542 |
| Cow position: | chr9:29034986-29034739 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 22, 6 |
| Conread position: | 285-551 |
| Cow position: | chr9:18002904-18002643 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 102, 10 |
| Conread position: | 288-548 |
| Cow position: | chr9:45171120-45170866 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 26, 99 |
| Conread position: | 291-541 |
| Cow position: | chr9:49403809-49404050 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 15, 65 |
| Conread position: | 291-542 |
| Cow position: | chr9:27052290-27052036 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 12, 234 |
| Conread position: | 291-542 |
| Cow position: | chr9:35306068-35305820 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 109 |
| Conread position: | 291-549 |
| Cow position: | chr9:54924672-54924937 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 14, 7 |
| Conread position: | 291-551 |
| Cow position: | chr9:42998417-42998156 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 87, 138 |
| Conread position: | 291-551 |
| Cow position: | chr9:45974246-45974501 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 97, 9 |
| Conread position: | 294-549 |
| Cow position: | chr9:57951272-57951026 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 13, 125 |
| Conread position: | 296-542 |
| Cow position: | chr9:22440454-22440218 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 207, 90 |
| Conread position: | 300-547 |
| Cow position: | chr9:11317531-11317777 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 84, 225 |
| Conread position: | 302-551 |
| Cow position: | chr9:53608333-53608088 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 162 |
| Conread position: | 305-506 |
| Cow position: | chr9:41995774-41995978 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 305-520 |
| Cow position: | chr9:5532012-5532231 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 327-505 |
| Cow position: | chr9:16182403-16182227 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 333-452 |
| Cow position: | chr9:23970833-23970714 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 93 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 334-551 |
| Cow position: | chr9:22616718-22616925 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 337-544 |
| Cow position: | chr9:35100964-35101166 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 123, 93 |
| Conread position: | 353-542 |
| Cow position: | chr9:38692429-38692235 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 111, 0 |
Show alignments to all cow chromosomes.