Cow genome map
| Conread name: | Pig1-36N06 |
| Conread position: | 191-565 |
| Cow position: | chr1:12040847-12040484 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 57 |
| Conread position: | 193-348 |
| Cow position: | chr1:51445064-51445221 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 194-483 |
| Cow position: | chr1:4045271-4044990 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 88 |
| Conread position: | 196-329 |
| Cow position: | chr1:100753339-100753474 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 197-340 |
| Cow position: | chr1:47472122-47472262 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 23, 70 |
| Conread position: | 197-340 |
| Cow position: | chr1:54440672-54440527 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 197-342 |
| Cow position: | chr1:87946173-87946314 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 197-345 |
| Cow position: | chr1:59196730-59196579 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 18, 94 |
| Conread position: | 197-346 |
| Cow position: | chr1:7834049-7834198 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 14, 109 |
| Conread position: | 197-347 |
| Cow position: | chr1:81234364-81234212 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 23, 116 |
| Conread position: | 197-528 |
| Cow position: | chr1:82516312-82515982 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 83 |
| Conread position: | 197-565 |
| Cow position: | chr1:32350392-32350747 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 83 |
| Conread position: | 197-573 |
| Cow position: | chr1:17487972-17488348 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 138 |
| Conread position: | 198-326 |
| Cow position: | chr1:38268874-38269004 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 16, 109 |
| Conread position: | 198-475 |
| Cow position: | chr1:5304012-5304278 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 22, 132 |
| Conread position: | 198-482 |
| Cow position: | chr1:91763436-91763169 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 144, 16 |
| Conread position: | 198-572 |
| Cow position: | chr1:42182766-42182389 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 14 |
| Conread position: | 198-572 |
| Cow position: | chr1:52393881-52394226 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 72 |
| Conread position: | 198-573 |
| Cow position: | chr1:102460248-102459880 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 100 |
| Conread position: | 199-562 |
| Cow position: | chr1:95425530-95425876 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 148 |
| Conread position: | 199-569 |
| Cow position: | chr1:92612756-92612382 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 246 |
| Conread position: | 214-572 |
| Cow position: | chr1:79626550-79626891 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 132 |
| Conread position: | 241-427 |
| Cow position: | chr1:102516035-102515847 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 114, 136 |
| Conread position: | 265-538 |
| Cow position: | chr1:97510118-97509845 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 128 |
| Conread position: | 298-571 |
| Cow position: | chr1:79743567-79743292 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 313-556 |
| Cow position: | chr1:100753752-100753995 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 180 |
| Conread position: | 324-573 |
| Cow position: | chr1:26406595-26406835 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 21, 169 |
| Conread position: | 329-569 |
| Cow position: | chr1:87946502-87946744 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 335-573 |
| Cow position: | chr1:52388643-52388877 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 181 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 82, 7 |
| Conread position: | 342-480 |
| Cow position: | chr1:98296988-98297121 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 14, 66 |
| Conread position: | 343-561 |
| Cow position: | chr1:5192130-5192341 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 134, 21 |
| Conread position: | 350-572 |
| Cow position: | chr1:98246412-98246192 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 33 |
| Conread position: | 351-573 |
| Cow position: | chr1:102505812-102505600 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 108, 83 |
| Conread position: | 361-560 |
| Cow position: | chr1:6714403-6714597 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 49, 78 |
| Conread position: | 375-573 |
| Cow position: | chr1:68530810-68530610 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 97, 116 |
| Conread position: | 379-523 |
| Cow position: | chr1:39506658-39506802 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 94, 113 |
| Conread position: | 389-569 |
| Cow position: | chr1:102532047-102531865 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 115, 132 |
| Conread position: | 465-557 |
| Cow position: | chr1:5304564-5304656 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 79 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.