Cow genome map


           Conread name:
           Pig1-36N06
        

               Conread position:
               191-330
               

               Cow position:
               chr21:44562391-44562531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 63
               

               Conread position:
               197-565
               

               Cow position:
               chr21:7691724-7691351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 24
               

               Conread position:
               197-573
               

               Cow position:
               chr21:39684050-39684409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 171
               

               Conread position:
               198-348
               

               Cow position:
               chr21:23853312-23853464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               200-571
               

               Cow position:
               chr21:26513473-26513869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               277
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               20, 268
               

               Conread position:
               201-572
               

               Cow position:
               chr21:39327729-39327361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 66
               

               Conread position:
               202-346
               

               Cow position:
               chr21:41551376-41551521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               18, 70
               

               Conread position:
               213-346
               

               Cow position:
               chr21:41297910-41297777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               134
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               285-569
               

               Cow position:
               chr21:13812436-13812159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               211
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               63, 21
               

               Conread position:
               378-569
               

               Cow position:
               chr21:40107300-40107496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               106, 0
               

               Conread position:
               400-562
               

               Cow position:
               chr21:19781694-19781534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               428-569
               

               Cow position:
               chr21:20022690-20022829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               25, 0
               
Show alignments to all cow chromosomes.