Cow genome map
| Conread name: | Pig1-39B02 |
| Conread position: | 163-429 |
| Cow position: | chr11:63998834-63999100 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 14, 46 |
| Conread position: | 193-418 |
| Cow position: | chr11:17676150-17676370 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 196-421 |
| Cow position: | chr11:52380645-52380872 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 17, 50 |
| Conread position: | 197-424 |
| Cow position: | chr11:40395663-40395436 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 13 |
| Conread position: | 201-414 |
| Cow position: | chr11:1625001-1625217 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 34, 11 |
| Conread position: | 201-421 |
| Cow position: | chr11:4636956-4637172 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 202-390 |
| Cow position: | chr11:65431733-65431549 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 126, 39 |
| Conread position: | 208-434 |
| Cow position: | chr11:40818424-40818638 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 210-350 |
| Cow position: | chr11:42452695-42452834 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 116, 76 |
| Conread position: | 212-389 |
| Cow position: | chr11:4653053-4653223 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 212-429 |
| Cow position: | chr11:62663029-62663240 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 41, 20 |
| Conread position: | 215-416 |
| Cow position: | chr11:41293600-41293813 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 7 |
| Conread position: | 221-409 |
| Cow position: | chr11:4411673-4411857 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 50, 33 |
| Conread position: | 221-429 |
| Cow position: | chr11:34646794-34646581 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 92, 22 |
| Conread position: | 224-432 |
| Cow position: | chr11:14470558-14470358 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 226-415 |
| Cow position: | chr11:18852099-18851914 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 5, 59 |
| Conread position: | 227-418 |
| Cow position: | chr11:67614731-67614919 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 227-421 |
| Cow position: | chr11:38211837-38211645 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 36 |
| Conread position: | 227-429 |
| Cow position: | chr11:46922693-46922894 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 118, 65 |
| Conread position: | 228-376 |
| Cow position: | chr11:32586935-32587079 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 228-376 |
| Cow position: | chr11:63977248-63977102 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 228-379 |
| Cow position: | chr11:62655885-62655735 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 8, 63 |
| Conread position: | 228-398 |
| Cow position: | chr11:30172494-30172327 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 10, 57 |
| Conread position: | 228-406 |
| Cow position: | chr11:15591287-15591460 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 228-416 |
| Cow position: | chr11:15017252-15017061 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 14, 63 |
| Conread position: | 228-416 |
| Cow position: | chr11:27248681-27248498 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 228-416 |
| Cow position: | chr11:80556409-80556227 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 105, 14 |
| Conread position: | 228-418 |
| Cow position: | chr11:35153627-35153821 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 96, 52 |
| Conread position: | 228-419 |
| Cow position: | chr11:25721809-25721994 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 19, 47 |
| Conread position: | 228-421 |
| Cow position: | chr11:897857-897673 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 228-421 |
| Cow position: | chr11:48086112-48085918 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 11, 63 |
| Conread position: | 228-421 |
| Cow position: | chr11:62239934-62239744 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 228-421 |
| Cow position: | chr11:65607497-65607689 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 5, 97 |
| Conread position: | 228-442 |
| Cow position: | chr11:41363-41158 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 155, 59 |
| Conread position: | 229-399 |
| Cow position: | chr11:3175860-3175695 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 229-418 |
| Cow position: | chr11:15339248-15339066 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 8, 42 |
| Conread position: | 229-450 |
| Cow position: | chr11:18154365-18154587 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 185, 41 |
| Conread position: | 229-469 |
| Cow position: | chr11:2484605-2484841 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 86, 14 |
| Conread position: | 230-421 |
| Cow position: | chr11:11558359-11558171 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 102, 31 |
| Conread position: | 230-429 |
| Cow position: | chr11:11469469-11469656 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 230-432 |
| Cow position: | chr11:66188129-66188328 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 6, 43 |
| Conread position: | 230-441 |
| Cow position: | chr11:80296668-80296872 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 114, 37 |
| Conread position: | 231-364 |
| Cow position: | chr11:6154758-6154627 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 231-398 |
| Cow position: | chr11:11483511-11483334 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 84, 59 |
| Conread position: | 231-418 |
| Cow position: | chr11:11125855-11125666 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 36 |
| Conread position: | 231-424 |
| Cow position: | chr11:13042958-13043149 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 232-406 |
| Cow position: | chr11:33369341-33369165 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 94, 58 |
| Conread position: | 232-412 |
| Cow position: | chr11:258983-259163 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 11, 60 |
| Conread position: | 232-413 |
| Cow position: | chr11:27747107-27746931 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 232-416 |
| Cow position: | chr11:17036343-17036523 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 232-418 |
| Cow position: | chr11:40608404-40608591 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 75, 58 |
| Conread position: | 232-421 |
| Cow position: | chr11:2907345-2907523 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 232-421 |
| Cow position: | chr11:42159873-42160054 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 232-421 |
| Cow position: | chr11:49872698-49872885 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 83, 58 |
| Conread position: | 232-421 |
| Cow position: | chr11:55053052-55052871 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 232-421 |
| Cow position: | chr11:83043178-83043363 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 232-424 |
| Cow position: | chr11:74427868-74427674 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 92, 47 |
| Conread position: | 233-387 |
| Cow position: | chr11:70821232-70821078 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 74, 56 |
| Conread position: | 233-405 |
| Cow position: | chr11:63201444-63201269 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 54, 92 |
| Conread position: | 233-407 |
| Cow position: | chr11:42067052-42066878 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 78, 57 |
| Conread position: | 233-408 |
| Cow position: | chr11:21843951-21844124 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 89, 46 |
| Conread position: | 233-410 |
| Cow position: | chr11:30485845-30485662 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 80, 57 |
| Conread position: | 233-415 |
| Cow position: | chr11:44223069-44222895 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 91, 34 |
| Conread position: | 233-418 |
| Cow position: | chr11:42206604-42206424 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 233-424 |
| Cow position: | chr11:51729462-51729283 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 234-419 |
| Cow position: | chr11:20238863-20238678 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 99, 56 |
| Conread position: | 234-421 |
| Cow position: | chr11:50152626-50152814 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 92, 56 |
| Conread position: | 235-386 |
| Cow position: | chr11:81340358-81340506 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 235-421 |
| Cow position: | chr11:8437504-8437694 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 84, 32 |
| Conread position: | 235-421 |
| Cow position: | chr11:17721615-17721802 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 68, 54 |
| Conread position: | 235-421 |
| Cow position: | chr11:52297037-52297221 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 87, 57 |
| Conread position: | 235-429 |
| Cow position: | chr11:63165465-63165655 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 236-421 |
| Cow position: | chr11:17083128-17083310 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 56 |
| Conread position: | 236-422 |
| Cow position: | chr11:58186057-58185881 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 236-451 |
| Cow position: | chr11:54872576-54872786 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 126, 54 |
| Conread position: | 237-421 |
| Cow position: | chr11:72292745-72292552 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 70, 53 |
| Conread position: | 239-412 |
| Cow position: | chr11:29782339-29782174 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 39 |
| Conread position: | 239-417 |
| Cow position: | chr11:66104211-66104392 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 129, 51 |
| Conread position: | 239-438 |
| Cow position: | chr11:26274783-26274974 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 13, 47 |
| Conread position: | 241-421 |
| Cow position: | chr11:77319590-77319414 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 241-424 |
| Cow position: | chr11:78820329-78820148 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 66, 42 |
| Conread position: | 242-376 |
| Cow position: | chr11:6784384-6784253 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 242-392 |
| Cow position: | chr11:12768575-12768428 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 242-412 |
| Cow position: | chr11:71814881-71814715 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 242-416 |
| Cow position: | chr11:35580440-35580265 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 81, 43 |
| Conread position: | 242-416 |
| Cow position: | chr11:45435254-45435085 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 91, 36 |
| Conread position: | 242-416 |
| Cow position: | chr11:65157226-65157403 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 75, 45 |
| Conread position: | 242-417 |
| Cow position: | chr11:18447322-18447488 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 242-417 |
| Cow position: | chr11:48544615-48544441 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 115, 44 |
| Conread position: | 242-417 |
| Cow position: | chr11:80639373-80639543 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 242-418 |
| Cow position: | chr11:62812773-62812947 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 242-418 |
| Cow position: | chr11:69978144-69977973 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 242-418 |
| Cow position: | chr11:83032856-83032683 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 242-421 |
| Cow position: | chr11:1932309-1932492 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 66, 44 |
| Conread position: | 242-421 |
| Cow position: | chr11:2917414-2917586 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 242-421 |
| Cow position: | chr11:20205679-20205852 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 242-421 |
| Cow position: | chr11:30192357-30192178 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 64, 30 |
| Conread position: | 242-421 |
| Cow position: | chr11:30830444-30830614 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 242-421 |
| Cow position: | chr11:37424968-37425148 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 36, 109 |
| Conread position: | 242-421 |
| Cow position: | chr11:44032185-44032011 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 242-421 |
| Cow position: | chr11:48315220-48315397 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 242-421 |
| Cow position: | chr11:62789306-62789130 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 93, 48 |
| Conread position: | 242-421 |
| Cow position: | chr11:71022179-71022000 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 19, 49 |
| Conread position: | 242-429 |
| Cow position: | chr11:74316885-74316701 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 242-430 |
| Cow position: | chr11:30986815-30986632 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 242-438 |
| Cow position: | chr11:3896519-3896719 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 81, 48 |
| Conread position: | 242-438 |
| Cow position: | chr11:62742469-62742663 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 192, 48 |
| Conread position: | 242-439 |
| Cow position: | chr11:86895551-86895357 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 107, 43 |
| Conread position: | 242-443 |
| Cow position: | chr11:33409087-33409283 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 90, 25 |
| Conread position: | 242-443 |
| Cow position: | chr11:41985869-41986067 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 243-404 |
| Cow position: | chr11:43965701-43965861 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 243-405 |
| Cow position: | chr11:53486982-53487138 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 43 |
| Conread position: | 243-412 |
| Cow position: | chr11:6255831-6255995 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 90, 49 |
| Conread position: | 243-421 |
| Cow position: | chr11:71390396-71390561 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 243-428 |
| Cow position: | chr11:30842847-30843026 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 243-454 |
| Cow position: | chr11:26535962-26535755 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 106, 40 |
| Conread position: | 245-431 |
| Cow position: | chr11:22884583-22884403 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 7, 46 |
| Conread position: | 246-399 |
| Cow position: | chr11:48296200-48296052 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 246-417 |
| Cow position: | chr11:81134994-81135164 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 87, 44 |
| Conread position: | 247-421 |
| Cow position: | chr11:65762410-65762591 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 63, 45 |
| Conread position: | 248-428 |
| Cow position: | chr11:17309573-17309397 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 88, 38 |
| Conread position: | 251-353 |
| Cow position: | chr11:83323747-83323647 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 86 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 251-400 |
| Cow position: | chr11:63484110-63483963 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 251-413 |
| Cow position: | chr11:15278848-15279005 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 251-414 |
| Cow position: | chr11:63866491-63866653 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 103, 39 |
| Conread position: | 251-418 |
| Cow position: | chr11:30894833-30895001 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 61, 31 |
| Conread position: | 251-421 |
| Cow position: | chr11:62620546-62620376 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 62, 39 |
| Conread position: | 251-424 |
| Cow position: | chr11:49207881-49207707 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 73, 22 |
| Conread position: | 251-435 |
| Cow position: | chr11:34467732-34467556 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 252-407 |
| Cow position: | chr11:44614997-44615154 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 116, 33 |
| Conread position: | 252-421 |
| Cow position: | chr11:15382326-15382503 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 38 |
| Conread position: | 253-389 |
| Cow position: | chr11:85985881-85986018 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 39 |
| Conread position: | 253-417 |
| Cow position: | chr11:25119768-25119928 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 255-412 |
| Cow position: | chr11:18910718-18910877 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 77, 30 |
| Conread position: | 258-416 |
| Cow position: | chr11:45646430-45646588 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 75, 32 |
| Conread position: | 267-415 |
| Cow position: | chr11:39499509-39499362 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 74, 23 |
| Conread position: | 268-418 |
| Cow position: | chr11:30494144-30493999 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 269-421 |
| Cow position: | chr11:31410728-31410878 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 306-442 |
| Cow position: | chr11:28644202-28644067 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 117, 0 |
Show alignments to all cow chromosomes.