Cow genome map

Conread name: Pig1-39B02

Conread position: 219-421
Cow position: chr12:24663301-24663093 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 72

Conread position: 220-418
Cow position: chr12:17031788-17031597 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 33, 67

Conread position: 221-421
Cow position: chr12:15703317-15703518 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 103, 53

Conread position: 222-375
Cow position: chr12:10611834-10611684 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 223-379
Cow position: chr12:17332050-17331889 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 84, 150

Conread position: 224-371
Cow position: chr12:3579658-3579513 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 108, 8

Conread position: 225-379
Cow position: chr12:38165367-38165520 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 101, 61

Conread position: 226-407
Cow position: chr12:2835578-2835398 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 90, 60

Conread position: 226-418
Cow position: chr12:22485986-22485788 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 227-389
Cow position: chr12:8711154-8710994 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 25, 16

Conread position: 227-408
Cow position: chr12:33851528-33851349 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 227-418
Cow position: chr12:38009912-38010105 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 62, 42

Conread position: 228-390
Cow position: chr12:18978860-18978697 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 19, 42

Conread position: 228-406
Cow position: chr12:17254313-17254135 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 62

Conread position: 228-416
Cow position: chr12:30745887-30745700 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 103, 62

Conread position: 228-418
Cow position: chr12:23714843-23714657 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 228-421
Cow position: chr12:5839485-5839677 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 34, 64

Conread position: 228-421
Cow position: chr12:9143556-9143366 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 40

Conread position: 228-429
Cow position: chr12:37169778-37169975 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 100, 45

Conread position: 228-430
Cow position: chr12:6958389-6958189 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 109, 21

Conread position: 229-421
Cow position: chr12:6480815-6480619 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 13, 64

Conread position: 229-421
Cow position: chr12:42879869-42879673 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 78, 57

Conread position: 229-432
Cow position: chr12:6241493-6241287 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 14

Conread position: 230-418
Cow position: chr12:20776760-20776939 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 232-398
Cow position: chr12:1952638-1952800 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 232-399
Cow position: chr12:37771032-37770871 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 232-399
Cow position: chr12:46106956-46106791 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 85, 53

Conread position: 232-421
Cow position: chr12:7884513-7884702 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 146
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 77, 54

Conread position: 232-421
Cow position: chr12:15429430-15429617 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 88, 35

Conread position: 232-425
Cow position: chr12:9766714-9766905 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 181, 37

Conread position: 232-454
Cow position: chr12:11272662-11272884 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 181, 58

Conread position: 233-387
Cow position: chr12:44892375-44892220 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 82, 53

Conread position: 233-430
Cow position: chr12:24181309-24181115 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 183, 49

Conread position: 234-417
Cow position: chr12:25814322-25814136 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 64, 48

Conread position: 234-437
Cow position: chr12:31841735-31841532 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 139
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 56

Conread position: 235-424
Cow position: chr12:4769083-4768902 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 238-415
Cow position: chr12:44861096-44861275 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 79, 45

Conread position: 240-429
Cow position: chr12:17269961-17269773 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 16, 46

Conread position: 241-379
Cow position: chr12:15151718-15151848 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 241-418
Cow position: chr12:26576050-26575878 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 241-421
Cow position: chr12:4512293-4512471 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 241-450
Cow position: chr12:26217669-26217874 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 242-395
Cow position: chr12:42684778-42684940 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 50

Conread position: 242-410
Cow position: chr12:29180831-29180665 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 242-412
Cow position: chr12:583347-583522 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 75, 45

Conread position: 242-415
Cow position: chr12:17252046-17252214 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 242-415
Cow position: chr12:19261352-19261180 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 70, 48

Conread position: 242-415
Cow position: chr12:33949057-33948889 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 0

Conread position: 242-415
Cow position: chr12:45039264-45039095 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 242-417
Cow position: chr12:19272533-19272706 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 242-418
Cow position: chr12:17879148-17879319 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 242-418
Cow position: chr12:36261851-36261671 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 78, 48

Conread position: 242-421
Cow position: chr12:7902648-7902820 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 48, 0

Conread position: 242-421
Cow position: chr12:18123823-18123648 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 242-421
Cow position: chr12:24437475-24437656 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 82, 50

Conread position: 242-421
Cow position: chr12:25804988-25805153 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 242-421
Cow position: chr12:29731468-29731293 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 48, 0

Conread position: 242-421
Cow position: chr12:37514124-37514302 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 81

Conread position: 242-421
Cow position: chr12:48578992-48578822 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 242-424
Cow position: chr12:29057547-29057365 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 88, 41

Conread position: 242-424
Cow position: chr12:38774088-38774267 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 242-425
Cow position: chr12:32169703-32169513 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 43

Conread position: 242-429
Cow position: chr12:29316305-29316491 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 91, 47

Conread position: 242-431
Cow position: chr12:17490370-17490185 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 62, 41

Conread position: 242-456
Cow position: chr12:2734754-2734963 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 242-464
Cow position: chr12:2964203-2963987 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 243-409
Cow position: chr12:24032644-24032487 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 243-416
Cow position: chr12:14986903-14986733 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 42, 0

Conread position: 244-417
Cow position: chr12:45092595-45092429 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 32, 45

Conread position: 246-417
Cow position: chr12:25528409-25528577 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 246-421
Cow position: chr12:36544492-36544662 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 246-422
Cow position: chr12:24116220-24116385 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 246-422
Cow position: chr12:38679201-38679025 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 172, 44

Conread position: 249-418
Cow position: chr12:20439112-20439275 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 251-403
Cow position: chr12:41684652-41684504 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 39

Conread position: 251-421
Cow position: chr12:24166801-24166965 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 251-422
Cow position: chr12:15122473-15122304 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 39, 0

Conread position: 251-439
Cow position: chr12:38552341-38552158 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 252-388
Cow position: chr12:40434896-40435031 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 80, 38

Conread position: 252-416
Cow position: chr12:12233028-12232867 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 135
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 81, 38

Conread position: 252-416
Cow position: chr12:15089663-15089500 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 65, 34

Conread position: 252-417
Cow position: chr12:3371401-3371559 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 252-418
Cow position: chr12:26777047-26777207 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 255-424
Cow position: chr12:23446860-23446696 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 28

Conread position: 263-426
Cow position: chr12:25917140-25917303 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 26

Conread position: 299-421
Cow position: chr12:27037349-27037471 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.