Cow genome map
| Conread name: | Pig1-39B02 |
| Conread position: | 196-424 |
| Cow position: | chr14:15428278-15428506 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 52, 5 |
| Conread position: | 197-429 |
| Cow position: | chr14:16524267-16524506 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 49, 17 |
| Conread position: | 198-429 |
| Cow position: | chr14:43868108-43868342 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 205-441 |
| Cow position: | chr14:29734549-29734320 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 128, 9 |
| Conread position: | 211-408 |
| Cow position: | chr14:24746273-24746476 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 96, 38 |
| Conread position: | 214-399 |
| Cow position: | chr14:9030108-9030284 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 215-415 |
| Cow position: | chr14:41749936-41749740 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 215-447 |
| Cow position: | chr14:27652983-27653212 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 105, 27 |
| Conread position: | 222-417 |
| Cow position: | chr14:24945667-24945470 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 89, 47 |
| Conread position: | 226-421 |
| Cow position: | chr14:21530246-21530051 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 226-424 |
| Cow position: | chr14:10937500-10937701 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 13, 65 |
| Conread position: | 227-412 |
| Cow position: | chr14:20640795-20640613 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 153 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 105, 16 |
| Conread position: | 227-424 |
| Cow position: | chr14:21357389-21357583 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 97, 63 |
| Conread position: | 228-411 |
| Cow position: | chr14:32784285-32784100 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 85, 62 |
| Conread position: | 228-416 |
| Cow position: | chr14:13042592-13042775 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 104, 62 |
| Conread position: | 228-416 |
| Cow position: | chr14:42155133-42154952 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 228-418 |
| Cow position: | chr14:9307899-9308087 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 98, 39 |
| Conread position: | 228-418 |
| Cow position: | chr14:13845821-13846007 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 25, 63 |
| Conread position: | 228-418 |
| Cow position: | chr14:15470154-15469960 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 10, 58 |
| Conread position: | 228-421 |
| Cow position: | chr14:41210694-41210880 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 66 |
| Conread position: | 228-421 |
| Cow position: | chr14:49940846-49941036 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 114, 56 |
| Conread position: | 228-426 |
| Cow position: | chr14:10851860-10852064 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 78, 57 |
| Conread position: | 228-429 |
| Cow position: | chr14:12033412-12033208 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 83, 62 |
| Conread position: | 228-432 |
| Cow position: | chr14:33457212-33457007 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 96, 62 |
| Conread position: | 229-408 |
| Cow position: | chr14:36151158-36151337 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 94, 57 |
| Conread position: | 229-418 |
| Cow position: | chr14:12954541-12954363 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 229-424 |
| Cow position: | chr14:14622334-14622147 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 120, 54 |
| Conread position: | 231-417 |
| Cow position: | chr14:36775499-36775670 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 231-418 |
| Cow position: | chr14:21224479-21224660 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 175, 59 |
| Conread position: | 232-366 |
| Cow position: | chr14:23080918-23080784 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 12, 56 |
| Conread position: | 232-415 |
| Cow position: | chr14:20826328-20826509 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 100, 54 |
| Conread position: | 232-421 |
| Cow position: | chr14:40191427-40191610 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 57 |
| Conread position: | 232-421 |
| Cow position: | chr14:48838428-48838620 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 93, 53 |
| Conread position: | 232-435 |
| Cow position: | chr14:18270197-18270400 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 73, 47 |
| Conread position: | 232-443 |
| Cow position: | chr14:30023363-30023150 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 83, 58 |
| Conread position: | 233-396 |
| Cow position: | chr14:2852988-2853150 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 100, 57 |
| Conread position: | 233-421 |
| Cow position: | chr14:2759296-2759111 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 14, 58 |
| Conread position: | 233-429 |
| Cow position: | chr14:25903370-25903564 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 233-429 |
| Cow position: | chr14:33714836-33714645 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 99, 53 |
| Conread position: | 235-390 |
| Cow position: | chr14:20667165-20667014 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 235-421 |
| Cow position: | chr14:45677071-45677255 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 96, 55 |
| Conread position: | 235-424 |
| Cow position: | chr14:4877387-4877203 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 112, 45 |
| Conread position: | 236-416 |
| Cow position: | chr14:33791034-33791208 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 237-434 |
| Cow position: | chr14:20466778-20466975 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 87, 48 |
| Conread position: | 241-416 |
| Cow position: | chr14:25227993-25228161 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 65, 43 |
| Conread position: | 241-418 |
| Cow position: | chr14:27733454-27733624 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 242-406 |
| Cow position: | chr14:8949498-8949660 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 82, 48 |
| Conread position: | 242-417 |
| Cow position: | chr14:11729260-11729089 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 242-418 |
| Cow position: | chr14:4848197-4848370 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 23 |
| Conread position: | 242-418 |
| Cow position: | chr14:20110875-20110700 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 15, 49 |
| Conread position: | 242-419 |
| Cow position: | chr14:18345877-18345705 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 242-421 |
| Cow position: | chr14:10078101-10078293 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 48 |
| Conread position: | 242-421 |
| Cow position: | chr14:11643399-11643225 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 242-421 |
| Cow position: | chr14:22988882-22989059 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 242-424 |
| Cow position: | chr14:12073109-12072928 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 92, 48 |
| Conread position: | 242-429 |
| Cow position: | chr14:5668274-5668084 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 74, 44 |
| Conread position: | 242-439 |
| Cow position: | chr14:11079302-11079495 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 243-419 |
| Cow position: | chr14:10706726-10706899 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 243-424 |
| Cow position: | chr14:1708811-1708628 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 92, 47 |
| Conread position: | 243-424 |
| Cow position: | chr14:35651932-35651757 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 100, 47 |
| Conread position: | 243-429 |
| Cow position: | chr14:28115343-28115154 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 71, 114 |
| Conread position: | 243-432 |
| Cow position: | chr14:25225580-25225764 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 245-429 |
| Cow position: | chr14:26433399-26433209 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 66, 45 |
| Conread position: | 246-430 |
| Cow position: | chr14:20736465-20736645 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 157, 33 |
| Conread position: | 247-424 |
| Cow position: | chr14:2975234-2975061 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 79, 43 |
| Conread position: | 248-406 |
| Cow position: | chr14:15228397-15228550 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 248-417 |
| Cow position: | chr14:36425551-36425386 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 251-416 |
| Cow position: | chr14:16760255-16760420 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 79, 34 |
| Conread position: | 251-421 |
| Cow position: | chr14:40754388-40754222 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 84, 32 |
| Conread position: | 251-422 |
| Cow position: | chr14:48426928-48427097 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 81, 39 |
| Conread position: | 251-423 |
| Cow position: | chr14:11280257-11280086 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 79, 39 |
| Conread position: | 251-434 |
| Cow position: | chr14:27848035-27848222 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 56, 23 |
| Conread position: | 253-417 |
| Cow position: | chr14:44751168-44751006 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 151, 37 |
| Conread position: | 254-421 |
| Cow position: | chr14:1646325-1646161 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 61, 20 |
| Conread position: | 261-421 |
| Cow position: | chr14:12924172-12924323 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 281-421 |
| Cow position: | chr14:28706928-28707072 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 302-421 |
| Cow position: | chr14:15055087-15054966 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
Show alignments to all cow chromosomes.