Cow genome map

Conread name: Pig1-39B02

Conread position: 161-424
Cow position: chr15:225985-225729 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 180
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 184, 23

Conread position: 190-424
Cow position: chr15:6647290-6647524 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 154
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 55, 92

Conread position: 197-421
Cow position: chr15:43715179-43715395 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 38, 17

Conread position: 206-421
Cow position: chr15:3695494-3695704 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 79

Conread position: 212-380
Cow position: chr15:36846321-36846153 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 107, 30

Conread position: 214-432
Cow position: chr15:26158731-26158512 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 98, 28

Conread position: 216-441
Cow position: chr15:36952330-36952113 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 27, 0

Conread position: 220-417
Cow position: chr15:17762782-17762974 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 113, 12

Conread position: 223-442
Cow position: chr15:11996151-11995935 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 148
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 91, 19

Conread position: 225-390
Cow position: chr15:50350720-50350890 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 92, 54

Conread position: 226-424
Cow position: chr15:5690979-5691173 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 58

Conread position: 227-418
Cow position: chr15:22553661-22553473 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 97, 22

Conread position: 227-424
Cow position: chr15:21822049-21821849 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 65

Conread position: 227-424
Cow position: chr15:21893659-21893853 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 227-456
Cow position: chr15:41534536-41534757 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 158
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 42, 20

Conread position: 228-359
Cow position: chr15:16492336-16492465 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 103, 14

Conread position: 228-388
Cow position: chr15:10153551-10153712 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 98, 59

Conread position: 228-405
Cow position: chr15:848522-848699 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 64

Conread position: 228-407
Cow position: chr15:26849652-26849479 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 228-412
Cow position: chr15:36353546-36353731 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 30, 58

Conread position: 228-414
Cow position: chr15:11909066-11908886 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 92, 15

Conread position: 228-416
Cow position: chr15:14964281-14964100 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 16, 63

Conread position: 228-416
Cow position: chr15:46284036-46283850 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 62, 0

Conread position: 228-417
Cow position: chr15:1722961-1722782 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 228-418
Cow position: chr15:26919389-26919206 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 228-418
Cow position: chr15:39598125-39598311 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 175, 62

Conread position: 228-421
Cow position: chr15:3700405-3700215 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 54

Conread position: 228-421
Cow position: chr15:12304520-12304710 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 228-424
Cow position: chr15:37381508-37381699 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 12, 55

Conread position: 228-424
Cow position: chr15:41321072-41320878 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 136
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 163, 55

Conread position: 228-427
Cow position: chr15:15025049-15025231 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 228-435
Cow position: chr15:52791820-52792023 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 89, 55

Conread position: 229-421
Cow position: chr15:4694632-4694815 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 107, 28

Conread position: 229-464
Cow position: chr15:28098993-28099224 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 96, 40

Conread position: 229-466
Cow position: chr15:18704052-18703817 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 113, 61

Conread position: 230-394
Cow position: chr15:10199216-10199375 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 97, 19

Conread position: 231-416
Cow position: chr15:24994628-24994446 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 102, 32

Conread position: 231-424
Cow position: chr15:4500581-4500778 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 74, 52

Conread position: 232-406
Cow position: chr15:840263-840091 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 232-408
Cow position: chr15:49483510-49483687 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 89, 54

Conread position: 232-418
Cow position: chr15:36887723-36887904 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 53, 0

Conread position: 232-421
Cow position: chr15:10442627-10442428 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 58

Conread position: 232-421
Cow position: chr15:26896815-26896622 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 146
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 92, 58

Conread position: 232-421
Cow position: chr15:40834999-40835185 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 51, 0

Conread position: 232-421
Cow position: chr15:50332859-50333052 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 154
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 85, 58

Conread position: 232-422
Cow position: chr15:25208875-25208684 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 85, 58

Conread position: 232-424
Cow position: chr15:49273846-49274029 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 232-434
Cow position: chr15:4735742-4735552 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 233-416
Cow position: chr15:14888753-14888578 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 52

Conread position: 233-418
Cow position: chr15:24982291-24982110 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 70, 22

Conread position: 233-421
Cow position: chr15:21903522-21903338 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 75, 34

Conread position: 233-421
Cow position: chr15:52316945-52317127 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 233-443
Cow position: chr15:2931686-2931473 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 163
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 80, 57

Conread position: 234-416
Cow position: chr15:26079461-26079287 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 57

Conread position: 234-418
Cow position: chr15:12913614-12913429 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 9, 57

Conread position: 234-442
Cow position: chr15:20459425-20459214 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 92, 49

Conread position: 235-418
Cow position: chr15:46059243-46059431 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 82, 55

Conread position: 235-418
Cow position: chr15:47773593-47773423 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 235-418
Cow position: chr15:49131946-49132127 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 236-389
Cow position: chr15:14883563-14883713 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 68, 54

Conread position: 236-424
Cow position: chr15:22939436-22939250 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 238-421
Cow position: chr15:33642979-33643162 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 11, 54

Conread position: 239-417
Cow position: chr15:244673-244849 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 78, 44

Conread position: 239-428
Cow position: chr15:1330218-1330024 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 51

Conread position: 240-442
Cow position: chr15:5420990-5420792 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 157, 50

Conread position: 241-411
Cow position: chr15:41475934-41475768 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 117, 49

Conread position: 241-421
Cow position: chr15:27063624-27063449 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 241-427
Cow position: chr15:8331304-8331123 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 174, 26

Conread position: 242-375
Cow position: chr15:13513428-13513558 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 242-383
Cow position: chr15:1502807-1502946 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 242-395
Cow position: chr15:27656995-27657151 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 48

Conread position: 242-407
Cow position: chr15:40000820-40000979 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 31, 49

Conread position: 242-412
Cow position: chr15:12045647-12045474 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 82, 41

Conread position: 242-414
Cow position: chr15:26851330-26851165 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 242-415
Cow position: chr15:20566811-20566978 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 242-418
Cow position: chr15:20391383-20391206 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 94, 31

Conread position: 242-421
Cow position: chr15:13432376-13432557 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 79, 40

Conread position: 242-421
Cow position: chr15:19002389-19002208 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 70, 45

Conread position: 242-421
Cow position: chr15:26442108-26442287 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 140
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 91, 48

Conread position: 242-421
Cow position: chr15:47844194-47844021 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 242-424
Cow position: chr15:24967695-24967869 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 242-430
Cow position: chr15:30471085-30470892 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 48

Conread position: 242-442
Cow position: chr15:31929004-31928804 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 78, 44

Conread position: 243-418
Cow position: chr15:53716329-53716503 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 138
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 71, 47

Conread position: 243-421
Cow position: chr15:49784386-49784213 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 246-418
Cow position: chr15:36259699-36259535 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 246-421
Cow position: chr15:14576228-14576400 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 24, 0

Conread position: 249-422
Cow position: chr15:23697001-23696838 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 143, 37

Conread position: 251-416
Cow position: chr15:33306023-33306177 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 251-417
Cow position: chr15:22532156-22532320 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 39, 0

Conread position: 251-418
Cow position: chr15:25906821-25906976 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 251-418
Cow position: chr15:34223770-34223935 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 17

Conread position: 251-421
Cow position: chr15:10049411-10049241 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 52, 32

Conread position: 251-438
Cow position: chr15:85343-85156 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 39

Conread position: 251-442
Cow position: chr15:16822853-16823027 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 252-421
Cow position: chr15:8353945-8354113 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 80, 38

Conread position: 252-432
Cow position: chr15:662560-662385 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 279-442
Cow position: chr15:26912144-26911984 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 35, 133

Conread position: 299-408
Cow position: chr15:1984246-1984355 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 299-418
Cow position: chr15:40594553-40594436 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 307-421
Cow position: chr15:25650452-25650341 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 93, 0

Conread position: 307-434
Cow position: chr15:42789190-42789064 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 116, 0

Show alignments to all cow chromosomes.