Cow genome map

Conread name: Pig1-39B02

Conread position: 196-427
Cow position: chr21:27521033-27521264 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 12, 65

Conread position: 202-408
Cow position: chr21:23673048-23672839 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 85

Conread position: 202-421
Cow position: chr21:641879-641668 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 26, 0

Conread position: 209-389
Cow position: chr21:17857054-17856878 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 32

Conread position: 211-385
Cow position: chr21:37480255-37480082 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 80

Conread position: 215-421
Cow position: chr21:643609-643405 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 11, 53

Conread position: 219-421
Cow position: chr21:39403247-39403444 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 221-452
Cow position: chr21:13883754-13883532 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 149, 20

Conread position: 224-432
Cow position: chr21:12461691-12461897 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 148
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 61

Conread position: 225-443
Cow position: chr21:868642-868864 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 14, 58

Conread position: 226-391
Cow position: chr21:29011701-29011862 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 158, 64

Conread position: 227-399
Cow position: chr21:742547-742380 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 227-417
Cow position: chr21:6051779-6051588 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 57

Conread position: 227-418
Cow position: chr21:45376221-45376035 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 227-421
Cow position: chr21:27229529-27229710 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 227-429
Cow position: chr21:33982540-33982734 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 227-436
Cow position: chr21:20160952-20160742 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 94, 44

Conread position: 228-400
Cow position: chr21:18495489-18495323 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 127
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 9, 52

Conread position: 228-408
Cow position: chr21:44732770-44732949 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 104, 58

Conread position: 228-415
Cow position: chr21:6851436-6851259 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 228-416
Cow position: chr21:11182822-11182639 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 228-418
Cow position: chr21:7169960-7169772 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 62, 0

Conread position: 228-421
Cow position: chr21:82337-82148 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 61

Conread position: 228-423
Cow position: chr21:38901036-38900853 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 228-424
Cow position: chr21:31279525-31279334 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 228-427
Cow position: chr21:27677757-27677559 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 63

Conread position: 228-431
Cow position: chr21:34010123-34010324 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 75, 55

Conread position: 229-376
Cow position: chr21:37479319-37479467 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 77, 14

Conread position: 229-419
Cow position: chr21:16152713-16152524 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 134
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 53

Conread position: 229-425
Cow position: chr21:30835638-30835440 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 61

Conread position: 229-429
Cow position: chr21:47464847-47465045 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 103, 62

Conread position: 229-432
Cow position: chr21:29978491-29978690 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 15, 40

Conread position: 229-442
Cow position: chr21:36508502-36508299 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 38, 0

Conread position: 230-413
Cow position: chr21:27568165-27567983 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 87, 53

Conread position: 230-417
Cow position: chr21:24858589-24858400 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 15, 62

Conread position: 232-376
Cow position: chr21:13488824-13488678 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 86, 53

Conread position: 232-411
Cow position: chr21:11678051-11678221 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 60

Conread position: 232-412
Cow position: chr21:36763331-36763151 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 92, 54

Conread position: 232-415
Cow position: chr21:48334516-48334705 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 232-416
Cow position: chr21:8506276-8506460 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 11, 60

Conread position: 232-416
Cow position: chr21:8509164-8509348 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 149
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 11, 58

Conread position: 232-418
Cow position: chr21:6713255-6713439 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 160, 58

Conread position: 233-379
Cow position: chr21:11761830-11761686 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 233-395
Cow position: chr21:39845870-39845700 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 84, 52

Conread position: 233-408
Cow position: chr21:16119894-16120066 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 74, 39

Conread position: 233-408
Cow position: chr21:29418840-29418662 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 60

Conread position: 233-430
Cow position: chr21:37495676-37495874 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 68, 50

Conread position: 233-458
Cow position: chr21:5465015-5464788 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 153
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 196, 59

Conread position: 233-463
Cow position: chr21:30848680-30848902 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 210, 50

Conread position: 234-416
Cow position: chr21:29213892-29214074 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 101, 22

Conread position: 235-400
Cow position: chr21:43655968-43655804 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 86, 55

Conread position: 236-421
Cow position: chr21:17252712-17252897 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 95, 42

Conread position: 236-421
Cow position: chr21:30243421-30243600 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 17, 32

Conread position: 238-412
Cow position: chr21:7460868-7460697 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 94, 52

Conread position: 239-421
Cow position: chr21:24875614-24875433 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 169, 52

Conread position: 239-429
Cow position: chr21:22209981-22210173 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 40

Conread position: 239-429
Cow position: chr21:46599620-46599434 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 240-406
Cow position: chr21:47383288-47383449 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 0

Conread position: 242-412
Cow position: chr21:30592055-30592219 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 41, 0

Conread position: 242-415
Cow position: chr21:71845-71674 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 90, 48

Conread position: 242-415
Cow position: chr21:25012337-25012169 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 48, 0

Conread position: 242-416
Cow position: chr21:15012690-15012525 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 136
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 25, 0

Conread position: 242-417
Cow position: chr21:40820592-40820768 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 65, 44

Conread position: 242-418
Cow position: chr21:14126531-14126361 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 242-418
Cow position: chr21:32559112-32559281 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 242-421
Cow position: chr21:802064-802236 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 49

Conread position: 242-421
Cow position: chr21:8426702-8426527 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 33, 48

Conread position: 242-421
Cow position: chr21:27744288-27744106 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 75, 48

Conread position: 242-421
Cow position: chr21:27810651-27810471 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 71, 48

Conread position: 242-421
Cow position: chr21:36682585-36682406 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 34

Conread position: 242-421
Cow position: chr21:37299719-37299543 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 90, 30

Conread position: 242-421
Cow position: chr21:45906362-45906542 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 89, 51

Conread position: 242-425
Cow position: chr21:22851174-22850995 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 174, 44

Conread position: 242-425
Cow position: chr21:30222601-30222419 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 175, 48

Conread position: 242-429
Cow position: chr21:28907290-28907471 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 133, 44

Conread position: 242-430
Cow position: chr21:41590307-41590492 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 48, 0

Conread position: 242-432
Cow position: chr21:30658120-30657940 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 44, 0

Conread position: 242-442
Cow position: chr21:24797914-24797718 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 82, 37

Conread position: 242-443
Cow position: chr21:42135360-42135556 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 242-456
Cow position: chr21:20174571-20174365 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 243-399
Cow position: chr21:18055871-18056026 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 92, 47

Conread position: 243-418
Cow position: chr21:16498773-16498603 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 47, 0

Conread position: 243-421
Cow position: chr21:34654328-34654154 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 135
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 246-421
Cow position: chr21:11644711-11644885 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 87, 44

Conread position: 246-424
Cow position: chr21:18568382-18568561 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 80, 44

Conread position: 249-421
Cow position: chr21:828958-829127 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 83, 41

Conread position: 251-406
Cow position: chr21:8351044-8351197 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 0

Conread position: 251-409
Cow position: chr21:40930226-40930382 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 39, 0

Conread position: 251-421
Cow position: chr21:11739869-11740038 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 126, 0

Conread position: 251-429
Cow position: chr21:41287546-41287720 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 252-406
Cow position: chr21:31462806-31462658 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 252-418
Cow position: chr21:23535962-23535793 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 25, 39

Conread position: 252-422
Cow position: chr21:7824941-7825112 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 103, 40

Conread position: 252-424
Cow position: chr21:3360767-3360938 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 140, 38

Conread position: 254-406
Cow position: chr21:36398321-36398466 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 254-421
Cow position: chr21:47719057-47719218 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 254-422
Cow position: chr21:20163954-20163788 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 28

Conread position: 284-464
Cow position: chr21:13043806-13043982 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 125
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 286-429
Cow position: chr21:9990728-9990583 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 306-421
Cow position: chr21:19359980-19360095 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.