Cow genome map

Conread name: Pig1-39B02

Conread position: 157-413
Cow position: chr23:21638656-21638404 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 178
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 36

Conread position: 195-435
Cow position: chr23:16744789-16744554 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 28, 89

Conread position: 196-399
Cow position: chr23:2281945-2282140 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 196-415
Cow position: chr23:5451565-5451344 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 30, 47

Conread position: 203-385
Cow position: chr23:23034204-23034383 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 203-443
Cow position: chr23:23104254-23104491 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 223, 18

Conread position: 209-421
Cow position: chr23:22238588-22238802 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 165
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 29, 59

Conread position: 214-418
Cow position: chr23:17486598-17486801 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 7, 11

Conread position: 215-425
Cow position: chr23:22297806-22298021 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 91, 28

Conread position: 215-432
Cow position: chr23:22530213-22530430 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 7

Conread position: 215-441
Cow position: chr23:1480865-1480639 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 103, 12

Conread position: 216-421
Cow position: chr23:35656633-35656431 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 144
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 101, 74

Conread position: 225-442
Cow position: chr23:40790179-40789972 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 124, 18

Conread position: 226-410
Cow position: chr23:33702176-33702364 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 12, 65

Conread position: 227-406
Cow position: chr23:11053685-11053859 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 127, 55

Conread position: 227-409
Cow position: chr23:35930160-35929982 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 105, 16

Conread position: 227-418
Cow position: chr23:2395386-2395575 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 97, 16

Conread position: 227-418
Cow position: chr23:7845501-7845316 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 228-395
Cow position: chr23:41478087-41477924 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 228-417
Cow position: chr23:2501645-2501830 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 64, 0

Conread position: 228-418
Cow position: chr23:1194282-1194469 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 143
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 11, 63

Conread position: 228-418
Cow position: chr23:7709993-7709813 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 228-421
Cow position: chr23:4844828-4844626 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 5, 62

Conread position: 228-422
Cow position: chr23:1429623-1429807 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 144
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 228-423
Cow position: chr23:18901850-18902034 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 15, 59

Conread position: 228-451
Cow position: chr23:5698985-5699193 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 211, 15

Conread position: 229-382
Cow position: chr23:2511356-2511204 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 57

Conread position: 229-417
Cow position: chr23:1585189-1585375 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 44, 23

Conread position: 229-417
Cow position: chr23:17484646-17484822 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 229-418
Cow position: chr23:22668301-22668482 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 104, 56

Conread position: 229-421
Cow position: chr23:17597633-17597446 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 40, 0

Conread position: 229-421
Cow position: chr23:25968626-25968444 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 14, 0

Conread position: 229-422
Cow position: chr23:40275343-40275525 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 18, 41

Conread position: 230-421
Cow position: chr23:31494079-31493884 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 19, 44

Conread position: 230-421
Cow position: chr23:40500889-40501078 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 110, 12

Conread position: 231-411
Cow position: chr23:20093033-20093213 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 20, 58

Conread position: 232-408
Cow position: chr23:20725483-20725655 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 232-415
Cow position: chr23:16880962-16881137 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 232-416
Cow position: chr23:5426645-5426458 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 89, 53

Conread position: 232-417
Cow position: chr23:1510721-1510903 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 20, 0

Conread position: 232-417
Cow position: chr23:32479809-32479993 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 58

Conread position: 232-418
Cow position: chr23:26841630-26841447 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 100, 51

Conread position: 233-415
Cow position: chr23:40637471-40637284 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 155

Conread position: 233-421
Cow position: chr23:4979076-4979262 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 34, 53

Conread position: 233-436
Cow position: chr23:534433-534232 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 157
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 52, 0

Conread position: 234-418
Cow position: chr23:1981467-1981636 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 234-418
Cow position: chr23:10416222-10416398 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 72, 48

Conread position: 234-432
Cow position: chr23:21423972-21423776 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 235-416
Cow position: chr23:9131759-9131936 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 134
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 235-421
Cow position: chr23:34611291-34611468 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 236-416
Cow position: chr23:1222037-1222212 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 168, 44

Conread position: 236-416
Cow position: chr23:5685992-5686172 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 97, 54

Conread position: 236-418
Cow position: chr23:19565650-19565473 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 236-418
Cow position: chr23:29626630-29626439 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 69, 50

Conread position: 236-449
Cow position: chr23:5603543-5603753 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 73, 54

Conread position: 239-421
Cow position: chr23:2286025-2285848 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 242-376
Cow position: chr23:1891284-1891410 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 242-416
Cow position: chr23:1877699-1877871 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 242-416
Cow position: chr23:24966263-24966438 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 85, 43

Conread position: 242-418
Cow position: chr23:8698623-8698443 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 49, 0

Conread position: 242-418
Cow position: chr23:24718605-24718779 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 48, 0

Conread position: 242-418
Cow position: chr23:28814577-28814398 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 48

Conread position: 242-418
Cow position: chr23:39049242-39049416 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 48, 0

Conread position: 242-421
Cow position: chr23:5881323-5881498 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 242-421
Cow position: chr23:7155503-7155673 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 90, 48

Conread position: 242-421
Cow position: chr23:27849191-27849016 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 90, 25

Conread position: 242-425
Cow position: chr23:5795674-5795492 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 178, 50

Conread position: 242-429
Cow position: chr23:3293887-3293707 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 242-429
Cow position: chr23:24809239-24809426 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 90, 43

Conread position: 242-429
Cow position: chr23:26986074-26986259 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 76, 28

Conread position: 242-430
Cow position: chr23:5395285-5395465 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 242-430
Cow position: chr23:40995361-40995185 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 242-481
Cow position: chr23:16664205-16664443 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 187, 43

Conread position: 243-421
Cow position: chr23:4646704-4646531 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 125
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 47, 0

Conread position: 243-429
Cow position: chr23:11212701-11212519 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 47, 0

Conread position: 247-418
Cow position: chr23:3967360-3967537 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 77, 43

Conread position: 249-421
Cow position: chr23:35965340-35965166 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 41

Conread position: 251-416
Cow position: chr23:22587067-22586904 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 85, 27

Conread position: 251-417
Cow position: chr23:36022603-36022765 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 251-417
Cow position: chr23:39778586-39778425 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 251-418
Cow position: chr23:2160453-2160617 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 39, 0

Conread position: 251-418
Cow position: chr23:18286372-18286215 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 251-421
Cow position: chr23:4501931-4501772 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 152, 11

Conread position: 251-421
Cow position: chr23:5927433-5927596 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 39

Conread position: 251-421
Cow position: chr23:9226463-9226302 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 87, 39

Conread position: 252-413
Cow position: chr23:33232512-33232674 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 64, 27

Conread position: 252-414
Cow position: chr23:24685428-24685271 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 38, 0

Conread position: 252-418
Cow position: chr23:2359064-2358903 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 253-406
Cow position: chr23:61775-61917 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 254-425
Cow position: chr23:21452546-21452717 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 159, 25

Conread position: 260-416
Cow position: chr23:3279289-3279441 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 98, 30

Conread position: 265-430
Cow position: chr23:14191946-14191785 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 7, 21

Conread position: 269-440
Cow position: chr23:19935090-19935255 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 169, 24

Conread position: 280-421
Cow position: chr23:5786006-5785864 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 19

Conread position: 285-415
Cow position: chr23:14753387-14753261 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 292-416
Cow position: chr23:21765066-21764947 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 299-427
Cow position: chr23:16076023-16076150 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 39

Conread position: 307-417
Cow position: chr23:21502497-21502607 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.