Cow genome map

Conread name: Pig1-39B02

Conread position: 136-429
Cow position: chr25:7217119-7216833 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 19, 85

Conread position: 192-418
Cow position: chr25:36746208-36746430 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 28, 48

Conread position: 194-421
Cow position: chr25:11060378-11060147 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 49, 98

Conread position: 197-424
Cow position: chr25:13272809-13272581 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 166
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 27, 10

Conread position: 202-385
Cow position: chr25:28939906-28940090 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 35, 89

Conread position: 202-418
Cow position: chr25:18720892-18721102 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 90

Conread position: 206-429
Cow position: chr25:3744503-3744738 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 6, 46

Conread position: 210-389
Cow position: chr25:2415023-2414844 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 29, 81

Conread position: 213-417
Cow position: chr25:33776283-33776074 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 141
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 214-385
Cow position: chr25:26643034-26642858 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 69

Conread position: 214-417
Cow position: chr25:5637167-5637366 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 23, 54

Conread position: 216-421
Cow position: chr25:15349691-15349890 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 27, 0

Conread position: 221-418
Cow position: chr25:31926171-31926359 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 223-418
Cow position: chr25:13223112-13222918 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 153
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 22, 64

Conread position: 226-399
Cow position: chr25:1509756-1509929 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 91, 16

Conread position: 226-432
Cow position: chr25:36872848-36873052 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 90, 16

Conread position: 227-416
Cow position: chr25:20203113-20202933 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 15, 0

Conread position: 227-418
Cow position: chr25:8347860-8347670 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 90, 18

Conread position: 228-400
Cow position: chr25:3992990-3992815 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 7, 61

Conread position: 228-412
Cow position: chr25:4157040-4157222 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 60, 0

Conread position: 228-413
Cow position: chr25:18934429-18934612 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 62, 0

Conread position: 228-413
Cow position: chr25:35109073-35109246 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 14, 0

Conread position: 228-419
Cow position: chr25:1802817-1802628 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 100, 15

Conread position: 228-421
Cow position: chr25:24669248-24669429 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 13, 0

Conread position: 228-421
Cow position: chr25:28597395-28597595 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 148
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 15, 0

Conread position: 228-423
Cow position: chr25:5808155-5807958 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 138
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 96, 55

Conread position: 228-424
Cow position: chr25:12305490-12305288 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 20, 66

Conread position: 228-429
Cow position: chr25:11432743-11432938 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 64

Conread position: 228-429
Cow position: chr25:22315410-22315212 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 228-432
Cow position: chr25:20008339-20008136 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 87, 11

Conread position: 228-435
Cow position: chr25:15573593-15573389 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 89, 20

Conread position: 228-438
Cow position: chr25:11957012-11956799 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 152
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 8, 63

Conread position: 229-421
Cow position: chr25:30852971-30852782 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 61, 0

Conread position: 230-386
Cow position: chr25:18131168-18131328 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 71, 12

Conread position: 230-421
Cow position: chr25:22298837-22298652 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 138
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 60, 0

Conread position: 230-463
Cow position: chr25:24115112-24115343 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 168
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 90, 12

Conread position: 231-417
Cow position: chr25:33550715-33550528 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 53

Conread position: 231-424
Cow position: chr25:11857782-11857975 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 142, 52

Conread position: 232-388
Cow position: chr25:4504577-4504726 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 232-395
Cow position: chr25:21082203-21082366 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 85, 54

Conread position: 232-415
Cow position: chr25:7008125-7007933 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 11, 60

Conread position: 232-421
Cow position: chr25:1840524-1840339 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 50, 0

Conread position: 232-421
Cow position: chr25:7673512-7673316 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 19, 61

Conread position: 232-421
Cow position: chr25:23828926-23829114 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 20, 59

Conread position: 233-391
Cow position: chr25:17141305-17141147 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 102, 51

Conread position: 233-408
Cow position: chr25:9269542-9269372 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 57, 0

Conread position: 233-421
Cow position: chr25:9573933-9574115 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 233-421
Cow position: chr25:33557468-33557290 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 97, 53

Conread position: 233-421
Cow position: chr25:35762790-35762604 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 91, 51

Conread position: 233-424
Cow position: chr25:18288568-18288759 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 147
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 184, 52

Conread position: 233-429
Cow position: chr25:11760258-11760443 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 57, 0

Conread position: 234-418
Cow position: chr25:21668449-21668267 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 234-418
Cow position: chr25:41150763-41150948 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 97, 56

Conread position: 234-424
Cow position: chr25:7380637-7380827 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 87, 37

Conread position: 234-442
Cow position: chr25:4245866-4245672 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 235-418
Cow position: chr25:12195020-12195208 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 82, 49

Conread position: 235-418
Cow position: chr25:36873135-36873315 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 140
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 17, 57

Conread position: 235-421
Cow position: chr25:13826631-13826450 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 57, 0

Conread position: 239-408
Cow position: chr25:26072367-26072533 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 242-379
Cow position: chr25:13470518-13470657 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 65, 44

Conread position: 242-379
Cow position: chr25:21192748-21192883 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 242-402
Cow position: chr25:30709152-30709314 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 73, 48

Conread position: 242-418
Cow position: chr25:26679420-26679244 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 84, 48

Conread position: 242-421
Cow position: chr25:5846612-5846794 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 45

Conread position: 242-421
Cow position: chr25:7641262-7641436 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 151, 44

Conread position: 242-421
Cow position: chr25:9025316-9025140 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 44

Conread position: 242-421
Cow position: chr25:13823526-13823704 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 90, 48

Conread position: 242-421
Cow position: chr25:20785394-20785571 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 87, 30

Conread position: 242-421
Cow position: chr25:23998746-23998909 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 242-424
Cow position: chr25:18491230-18491050 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 128
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 101, 48

Conread position: 242-424
Cow position: chr25:22565773-22565947 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 178, 28

Conread position: 242-429
Cow position: chr25:9843374-9843183 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 139
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 49, 21

Conread position: 243-416
Cow position: chr25:35902938-35902767 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 89, 13

Conread position: 243-421
Cow position: chr25:12509829-12509996 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 243-421
Cow position: chr25:13621170-13621341 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 243-421
Cow position: chr25:19130046-19129870 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 90, 47

Conread position: 243-421
Cow position: chr25:22734198-22734023 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 50, 0

Conread position: 243-442
Cow position: chr25:9989910-9990115 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 83, 47

Conread position: 246-418
Cow position: chr25:19679541-19679373 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 246-432
Cow position: chr25:22348269-22348459 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 71, 44

Conread position: 246-456
Cow position: chr25:31657091-31657297 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 44, 0

Conread position: 248-415
Cow position: chr25:7684712-7684877 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 72, 42

Conread position: 249-418
Cow position: chr25:36872549-36872376 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 75, 41

Conread position: 251-410
Cow position: chr25:10856532-10856688 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 251-415
Cow position: chr25:20523054-20523213 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 251-415
Cow position: chr25:26306019-26306183 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 133
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 66, 35

Conread position: 251-415
Cow position: chr25:35339006-35339169 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 136, 39

Conread position: 251-421
Cow position: chr25:19363876-19364044 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 137
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 39, 0

Conread position: 251-432
Cow position: chr25:21893518-21893342 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 252-396
Cow position: chr25:22571142-22570998 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 74, 31

Conread position: 252-421
Cow position: chr25:23244821-23244987 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 134
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 38, 0

Conread position: 252-424
Cow position: chr25:18760528-18760696 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 124
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 38

Conread position: 254-418
Cow position: chr25:2624975-2624814 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 36, 0

Conread position: 255-416
Cow position: chr25:9107353-9107504 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 258-418
Cow position: chr25:33457906-33457750 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 268-421
Cow position: chr25:15715039-15714888 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 274-408
Cow position: chr25:6782021-6781890 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 306-429
Cow position: chr25:23505184-23505059 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 307-421
Cow position: chr25:30624954-30625068 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 315-429
Cow position: chr25:4948083-4947969 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.