Cow genome map
| Conread name: | Pig1-39B02 |
| Conread position: | 194-421 |
| Cow position: | chrX:13122217-13121982 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 27, 51 |
| Conread position: | 194-421 |
| Cow position: | chrX:20339621-20339848 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 44, 80 |
| Conread position: | 196-408 |
| Cow position: | chrX:23497433-23497634 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 196-417 |
| Cow position: | chrX:32574586-32574365 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 57 |
| Conread position: | 202-443 |
| Cow position: | chrX:27705846-27705609 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 122, 12 |
| Conread position: | 208-364 |
| Cow position: | chrX:38726886-38727037 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 210-424 |
| Cow position: | chrX:33654589-33654803 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 109, 22 |
| Conread position: | 211-418 |
| Cow position: | chrX:38642500-38642296 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 17, 71 |
| Conread position: | 211-421 |
| Cow position: | chrX:32867125-32866919 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 212-421 |
| Cow position: | chrX:12979580-12979790 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 8, 33 |
| Conread position: | 214-390 |
| Cow position: | chrX:43059003-43059176 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 29, 7 |
| Conread position: | 214-391 |
| Cow position: | chrX:1571341-1571515 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 18, 72 |
| Conread position: | 214-406 |
| Cow position: | chrX:14135929-14135737 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 23, 78 |
| Conread position: | 215-429 |
| Cow position: | chrX:47079882-47079663 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 26, 47 |
| Conread position: | 216-421 |
| Cow position: | chrX:20583910-20583710 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 217-416 |
| Cow position: | chrX:10251954-10252148 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 107, 26 |
| Conread position: | 220-403 |
| Cow position: | chrX:6480349-6480534 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 97, 68 |
| Conread position: | 221-421 |
| Cow position: | chrX:35659039-35658843 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 96, 46 |
| Conread position: | 223-425 |
| Cow position: | chrX:26881322-26881528 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 94, 15 |
| Conread position: | 226-421 |
| Cow position: | chrX:6544487-6544301 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 15, 66 |
| Conread position: | 227-418 |
| Cow position: | chrX:6599535-6599735 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 64, 177 |
| Conread position: | 227-421 |
| Cow position: | chrX:34412087-34411890 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 77, 58 |
| Conread position: | 227-421 |
| Cow position: | chrX:41871299-41871111 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 227-421 |
| Cow position: | chrX:46068523-46068715 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 227-421 |
| Cow position: | chrX:47855217-47855025 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 25, 64 |
| Conread position: | 227-438 |
| Cow position: | chrX:17956929-17956717 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 8, 57 |
| Conread position: | 228-395 |
| Cow position: | chrX:4486786-4486954 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 103, 62 |
| Conread position: | 228-398 |
| Cow position: | chrX:41215559-41215389 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 101, 14 |
| Conread position: | 228-415 |
| Cow position: | chrX:5919733-5919542 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 21, 66 |
| Conread position: | 228-416 |
| Cow position: | chrX:37072622-37072438 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 228-416 |
| Cow position: | chrX:42927591-42927775 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 7, 52 |
| Conread position: | 228-418 |
| Cow position: | chrX:29467545-29467731 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 228-419 |
| Cow position: | chrX:5487707-5487890 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 63 |
| Conread position: | 228-421 |
| Cow position: | chrX:1466401-1466206 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 228-421 |
| Cow position: | chrX:9650789-9650980 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 228-421 |
| Cow position: | chrX:22392749-22392940 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 10, 58 |
| Conread position: | 228-421 |
| Cow position: | chrX:24749325-24749132 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 92, 64 |
| Conread position: | 228-421 |
| Cow position: | chrX:29230245-29230043 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 79, 58 |
| Conread position: | 228-421 |
| Cow position: | chrX:34314257-34314068 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 228-421 |
| Cow position: | chrX:35885493-35885683 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 10, 63 |
| Conread position: | 228-429 |
| Cow position: | chrX:1087910-1088104 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 228-430 |
| Cow position: | chrX:13177246-13177441 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 229-397 |
| Cow position: | chrX:39419484-39419646 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 229-409 |
| Cow position: | chrX:17524146-17524328 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 61 |
| Conread position: | 229-421 |
| Cow position: | chrX:21986065-21986247 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 229-421 |
| Cow position: | chrX:22482452-22482646 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 103, 64 |
| Conread position: | 229-421 |
| Cow position: | chrX:27431687-27431874 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 229-429 |
| Cow position: | chrX:43115386-43115187 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 86, 57 |
| Conread position: | 229-432 |
| Cow position: | chrX:38587607-38587810 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 9, 32 |
| Conread position: | 229-442 |
| Cow position: | chrX:34792086-34792287 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 174, 38 |
| Conread position: | 230-394 |
| Cow position: | chrX:3494813-3494974 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 7, 50 |
| Conread position: | 230-417 |
| Cow position: | chrX:32942846-32943028 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 96, 12 |
| Conread position: | 230-422 |
| Cow position: | chrX:42875444-42875255 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 232-390 |
| Cow position: | chrX:231792-231943 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 232-402 |
| Cow position: | chrX:4750104-4750268 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 99, 46 |
| Conread position: | 232-408 |
| Cow position: | chrX:17525640-17525810 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 15, 41 |
| Conread position: | 232-415 |
| Cow position: | chrX:37780878-37781059 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 101, 39 |
| Conread position: | 232-416 |
| Cow position: | chrX:2936187-2936006 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 148 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 232-417 |
| Cow position: | chrX:5118264-5118450 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 75, 58 |
| Conread position: | 232-424 |
| Cow position: | chrX:3806912-3806723 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 92, 47 |
| Conread position: | 232-424 |
| Cow position: | chrX:12290952-12290760 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 89, 58 |
| Conread position: | 232-424 |
| Cow position: | chrX:24365588-24365780 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 97, 58 |
| Conread position: | 232-429 |
| Cow position: | chrX:34377173-34376978 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 232-432 |
| Cow position: | chrX:8327139-8326937 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 80, 54 |
| Conread position: | 232-433 |
| Cow position: | chrX:45759904-45759703 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 12, 56 |
| Conread position: | 232-442 |
| Cow position: | chrX:11656312-11656105 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 232-442 |
| Cow position: | chrX:29050476-29050274 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 110, 47 |
| Conread position: | 232-455 |
| Cow position: | chrX:6640658-6640440 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 100, 56 |
| Conread position: | 233-399 |
| Cow position: | chrX:24633929-24633761 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 233-408 |
| Cow position: | chrX:38094293-38094463 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 233-416 |
| Cow position: | chrX:34836839-34837015 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 233-417 |
| Cow position: | chrX:32208594-32208774 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 233-418 |
| Cow position: | chrX:40685096-40685281 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 74, 53 |
| Conread position: | 233-421 |
| Cow position: | chrX:45429798-45429978 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 233-429 |
| Cow position: | chrX:27145832-27145640 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 233-431 |
| Cow position: | chrX:41166596-41166789 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 233-442 |
| Cow position: | chrX:27074818-27075027 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 83, 50 |
| Conread position: | 233-442 |
| Cow position: | chrX:38302047-38301833 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 79, 57 |
| Conread position: | 233-454 |
| Cow position: | chrX:27170967-27170757 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 88, 18 |
| Conread position: | 234-383 |
| Cow position: | chrX:43028461-43028314 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 38 |
| Conread position: | 234-400 |
| Cow position: | chrX:40556231-40556394 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 114, 52 |
| Conread position: | 234-418 |
| Cow position: | chrX:11654000-11653817 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 7, 50 |
| Conread position: | 234-418 |
| Cow position: | chrX:47345562-47345374 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 86, 56 |
| Conread position: | 234-421 |
| Cow position: | chrX:29541996-29542173 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 97, 51 |
| Conread position: | 234-421 |
| Cow position: | chrX:42246949-42247138 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 87, 49 |
| Conread position: | 234-432 |
| Cow position: | chrX:22075027-22074829 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 158, 33 |
| Conread position: | 235-409 |
| Cow position: | chrX:38218944-38218770 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 127, 48 |
| Conread position: | 235-421 |
| Cow position: | chrX:30337723-30337910 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 140 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 72, 56 |
| Conread position: | 235-424 |
| Cow position: | chrX:11633913-11633723 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 82, 48 |
| Conread position: | 235-424 |
| Cow position: | chrX:29601598-29601787 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 89, 56 |
| Conread position: | 236-418 |
| Cow position: | chrX:19394785-19394600 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 91, 54 |
| Conread position: | 236-418 |
| Cow position: | chrX:19469285-19469459 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 236-418 |
| Cow position: | chrX:38560780-38560606 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 236-424 |
| Cow position: | chrX:35285404-35285214 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 85, 50 |
| Conread position: | 238-424 |
| Cow position: | chrX:35681795-35681608 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 96, 45 |
| Conread position: | 239-454 |
| Cow position: | chrX:35382815-35383028 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 93, 44 |
| Conread position: | 242-379 |
| Cow position: | chrX:37177091-37176960 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 242-386 |
| Cow position: | chrX:31279703-31279845 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 242-404 |
| Cow position: | chrX:29681894-29682050 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 242-410 |
| Cow position: | chrX:12972902-12972738 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 126, 43 |
| Conread position: | 242-415 |
| Cow position: | chrX:34991585-34991414 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 242-418 |
| Cow position: | chrX:16836070-16836239 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 242-421 |
| Cow position: | chrX:4289658-4289488 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 242-421 |
| Cow position: | chrX:9201767-9201592 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 33, 49 |
| Conread position: | 242-421 |
| Cow position: | chrX:16763706-16763881 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 102, 48 |
| Conread position: | 242-421 |
| Cow position: | chrX:16984859-16984685 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 242-421 |
| Cow position: | chrX:20666678-20666857 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 126, 43 |
| Conread position: | 242-421 |
| Cow position: | chrX:22115090-22115273 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 33, 49 |
| Conread position: | 242-421 |
| Cow position: | chrX:23471644-23471822 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 91, 48 |
| Conread position: | 242-421 |
| Cow position: | chrX:27668738-27668914 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 242-421 |
| Cow position: | chrX:32910321-32910148 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 76, 41 |
| Conread position: | 242-421 |
| Cow position: | chrX:42894146-42893970 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 242-424 |
| Cow position: | chrX:12095547-12095731 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 75, 44 |
| Conread position: | 242-424 |
| Cow position: | chrX:35409976-35409793 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 84, 48 |
| Conread position: | 242-424 |
| Cow position: | chrX:41453523-41453343 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 242-427 |
| Cow position: | chrX:27446907-27446724 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 41 |
| Conread position: | 242-428 |
| Cow position: | chrX:31983354-31983548 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 67, 44 |
| Conread position: | 242-432 |
| Cow position: | chrX:4399342-4399158 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 82, 44 |
| Conread position: | 242-432 |
| Cow position: | chrX:9251939-9252130 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 78, 48 |
| Conread position: | 242-432 |
| Cow position: | chrX:13924085-13923897 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 242-442 |
| Cow position: | chrX:45502359-45502169 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 243-416 |
| Cow position: | chrX:14883734-14883907 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 75, 30 |
| Conread position: | 243-417 |
| Cow position: | chrX:8869181-8869354 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 99, 47 |
| Conread position: | 243-429 |
| Cow position: | chrX:33855003-33855183 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 246-418 |
| Cow position: | chrX:44991197-44991366 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 157, 37 |
| Conread position: | 246-421 |
| Cow position: | chrX:11325888-11326053 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 246-421 |
| Cow position: | chrX:31480186-31480015 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 91, 44 |
| Conread position: | 246-424 |
| Cow position: | chrX:23113512-23113326 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 246-430 |
| Cow position: | chrX:39290575-39290395 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 29, 47 |
| Conread position: | 250-421 |
| Cow position: | chrX:42380896-42381068 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 70, 19 |
| Conread position: | 251-415 |
| Cow position: | chrX:31436684-31436524 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 251-424 |
| Cow position: | chrX:26493222-26493047 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 96, 39 |
| Conread position: | 251-425 |
| Cow position: | chrX:20957454-20957275 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 70, 34 |
| Conread position: | 251-429 |
| Cow position: | chrX:34504838-34505013 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 136, 39 |
| Conread position: | 252-412 |
| Cow position: | chrX:31827641-31827791 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 252-418 |
| Cow position: | chrX:5026465-5026303 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 21, 41 |
| Conread position: | 255-421 |
| Cow position: | chrX:40035228-40035396 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 69, 35 |
| Conread position: | 256-418 |
| Cow position: | chrX:35543094-35542935 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 268-411 |
| Cow position: | chrX:13647586-13647731 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 43, 22 |
| Conread position: | 282-412 |
| Cow position: | chrX:41862546-41862416 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 285-421 |
| Cow position: | chrX:34532701-34532564 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 285-424 |
| Cow position: | chrX:878201-878339 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 287-421 |
| Cow position: | chrX:4515869-4515735 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 50, 89 |
| Conread position: | 299-421 |
| Cow position: | chrX:34508710-34508588 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 312-421 |
| Cow position: | chrX:31312182-31312073 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.