Cow genome map
| Conread name: | Pig1-39F13 |
| Conread position: | 3-333 |
| Cow position: | chr19:14959637-14959308 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 38, 21 |
| Conread position: | 4-414 |
| Cow position: | chr19:23614709-23615118 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 266 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 46, 26 |
| Conread position: | 4-418 |
| Cow position: | chr19:14940425-14940838 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 22 |
| Conread position: | 4-442 |
| Cow position: | chr19:23613701-23614138 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 26 |
| Conread position: | 4-450 |
| Cow position: | chr19:23613617-23614062 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 26 |
| Conread position: | 4-450 |
| Cow position: | chr19:23649823-23650268 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 21 |
| Conread position: | 4-451 |
| Cow position: | chr19:23613365-23613811 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 22 |
| Conread position: | 4-452 |
| Cow position: | chr19:23613869-23614316 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 23 |
| Conread position: | 4-454 |
| Cow position: | chr19:14948449-14948001 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 22 |
| Conread position: | 4-454 |
| Cow position: | chr19:14960290-14959843 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 22 |
| Conread position: | 5-364 |
| Cow position: | chr19:23650076-23650434 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 231 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 47, 22 |
| Conread position: | 5-451 |
| Cow position: | chr19:23597047-23597492 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 21 |
| Conread position: | 6-455 |
| Cow position: | chr19:14959870-14959438 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 284 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 46, 16 |
| Conread position: | 13-451 |
| Cow position: | chr19:20635523-20635086 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 13 |
| Conread position: | 13-451 |
| Cow position: | chr19:43570356-43569929 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 13-454 |
| Cow position: | chr19:23596974-23597411 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 281 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 14-311 |
| Cow position: | chr19:14940771-14941067 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 200 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 41, 16 |
| Conread position: | 14-421 |
| Cow position: | chr19:23649917-23650323 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 263 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 28, 12 |
| Conread position: | 14-449 |
| Cow position: | chr19:23649497-23649931 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 12 |
| Conread position: | 14-450 |
| Cow position: | chr19:14940015-14940450 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 12 |
| Conread position: | 14-451 |
| Cow position: | chr19:14940267-14940703 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 12 |
| Conread position: | 14-451 |
| Cow position: | chr19:14940603-14941039 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 20 |
| Conread position: | 14-454 |
| Cow position: | chr19:23649665-23650104 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 17-451 |
| Cow position: | chr19:14960193-14959764 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 9 |
| Conread position: | 21-451 |
| Cow position: | chr19:14939937-14940367 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 277 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 23, 45 |
| Conread position: | 21-456 |
| Cow position: | chr19:14960442-14960009 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 98 |
| Conread position: | 26-420 |
| Cow position: | chr19:43570102-43569710 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 17, 93 |
| Conread position: | 27-450 |
| Cow position: | chr19:23613471-23613894 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 106 |
| Conread position: | 35-373 |
| Cow position: | chr19:14940707-14941045 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 35-456 |
| Cow position: | chr19:14960345-14959925 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 99 |
| Conread position: | 36-451 |
| Cow position: | chr19:23614656-23615071 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 93 |
| Conread position: | 36-454 |
| Cow position: | chr19:23614320-23614738 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 100 |
| Conread position: | 39-448 |
| Cow position: | chr19:20678254-20678663 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 13, 92 |
| Conread position: | 39-451 |
| Cow position: | chr19:20677834-20678246 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 259 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 23, 92 |
| Conread position: | 39-453 |
| Cow position: | chr19:14940375-14940789 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 89 |
| Conread position: | 45-450 |
| Cow position: | chr19:23614245-23614650 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 84 |
| Conread position: | 46-451 |
| Cow position: | chr19:20677506-20677910 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 261 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 248, 89 |
| Conread position: | 46-451 |
| Cow position: | chr19:23614415-23614819 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 53-265 |
| Cow position: | chr19:20635231-20635020 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 53-292 |
| Cow position: | chr19:14916029-14916265 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 53-415 |
| Cow position: | chr19:14959669-14959310 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 240, 18 |
| Conread position: | 53-417 |
| Cow position: | chr19:14959176-14958819 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 155, 57 |
| Conread position: | 53-420 |
| Cow position: | chr19:23597347-23597713 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 239 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 124, 80 |
| Conread position: | 53-421 |
| Cow position: | chr19:43570158-43569791 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 53-442 |
| Cow position: | chr19:14940138-14940526 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 53-448 |
| Cow position: | chr19:23597263-23597657 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 53-449 |
| Cow position: | chr19:43570242-43569847 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 262 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 170, 73 |
| Conread position: | 53-450 |
| Cow position: | chr19:23597179-23597575 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 53-452 |
| Cow position: | chr19:23614086-23614484 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 53-454 |
| Cow position: | chr19:14940558-14940958 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 53-454 |
| Cow position: | chr19:23649368-23649768 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 261 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 156, 73 |
| Conread position: | 56-451 |
| Cow position: | chr19:14959257-14958869 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 358, 74 |
| Conread position: | 57-452 |
| Cow position: | chr19:14948480-14948087 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 262 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 105, 75 |
| Conread position: | 58-420 |
| Cow position: | chr19:20635394-20635033 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 61-452 |
| Cow position: | chr19:43570392-43570012 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 233, 65 |
| Conread position: | 64-451 |
| Cow position: | chr19:20635640-20635254 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 240 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 86, 61 |
| Conread position: | 65-450 |
| Cow position: | chr19:20677945-20678329 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 78, 53 |
| Conread position: | 65-451 |
| Cow position: | chr19:20635555-20635170 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 254 |
| Alignm E-value: | 8.00141e-43 |
| Alignm gaps (pig, cow): | 253, 70 |
| Conread position: | 71-450 |
| Cow position: | chr19:14960475-14960099 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 220, 59 |
| Conread position: | 94-418 |
| Cow position: | chr19:14959712-14959391 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 205 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 23, 35 |
| Conread position: | 95-454 |
| Cow position: | chr19:14959302-14958950 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 138-456 |
| Cow position: | chr19:14948484-14948167 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 149-448 |
| Cow position: | chr19:20635640-20635341 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 222, 239 |
| Conread position: | 158-454 |
| Cow position: | chr19:23613350-23613646 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 187 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 53, 64 |
| Conread position: | 214-451 |
| Cow position: | chr19:14948492-14948256 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
Show alignments to all cow chromosomes.