Cow genome map

Conread name: Pig1-39F13

Conread position: 2-456
Cow position: chr22:12499219-12499672 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 22

Conread position: 4-413
Cow position: chr22:12399157-12398749 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 23

Conread position: 4-450
Cow position: chr22:12399577-12399132 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 22

Conread position: 4-450
Cow position: chr22:12476206-12475761 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 18

Conread position: 4-450
Cow position: chr22:12499053-12499498 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 18

Conread position: 4-454
Cow position: chr22:12431305-12430856 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 23

Conread position: 4-454
Cow position: chr22:12475786-12475337 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 22

Conread position: 4-456
Cow position: chr22:12431137-12430686 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 21

Conread position: 5-445
Cow position: chr22:12458592-12458153 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 284
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 36, 21

Conread position: 5-454
Cow position: chr22:12499474-12499922 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 21

Conread position: 13-450
Cow position: chr22:11640882-11641318 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 272
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 38, 13

Conread position: 13-450
Cow position: chr22:12418919-12418483 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 280
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 41, 13

Conread position: 14-365
Cow position: chr22:12432303-12431953 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 230
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 36, 12

Conread position: 14-413
Cow position: chr22:12385305-12384907 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 12

Conread position: 14-415
Cow position: chr22:46654458-46654859 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 248
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 11

Conread position: 14-442
Cow position: chr22:12431967-12431540 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 264
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 17

Conread position: 14-447
Cow position: chr22:12458247-12457815 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 12

Conread position: 14-449
Cow position: chr22:12399315-12398881 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 12

Conread position: 14-450
Cow position: chr22:12432135-12431700 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 268
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 38, 17

Conread position: 14-450
Cow position: chr22:12458499-12458064 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 276
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 40, 12

Conread position: 14-454
Cow position: chr22:12399231-12398792 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 17

Conread position: 22-449
Cow position: chr22:12476356-12475930 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 13

Conread position: 25-448
Cow position: chr22:12399474-12399050 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 107

Conread position: 25-450
Cow position: chr22:46654300-46654725 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 273
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 13, 93

Conread position: 26-451
Cow position: chr22:12476269-12475844 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 270
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 29, 105

Conread position: 26-454
Cow position: chr22:12419176-12418731 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 265
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 28, 0

Conread position: 27-451
Cow position: chr22:11640643-11641067 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 274
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 25, 44

Conread position: 27-454
Cow position: chr22:12418990-12418563 (view UCSC Genome Browser custom track)
Alignm length: 430
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 103

Conread position: 36-422
Cow position: chr22:11641072-11641458 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 252
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 16, 98

Conread position: 36-442
Cow position: chr22:12458394-12457988 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 92

Conread position: 36-451
Cow position: chr22:12431778-12431363 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 259
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 16, 91

Conread position: 39-403
Cow position: chr22:12418810-12418446 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 240
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 15, 88

Conread position: 39-442
Cow position: chr22:12399627-12399224 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 92

Conread position: 39-449
Cow position: chr22:12498919-12499329 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 92

Conread position: 43-450
Cow position: chr22:14468029-14468435 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 257
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 244, 85

Conread position: 43-451
Cow position: chr22:12431519-12431111 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 262
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 9, 79

Conread position: 46-450
Cow position: chr22:12432439-12432036 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 255
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 97, 87

Conread position: 53-414
Cow position: chr22:12458124-12457762 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 241
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 356, 82

Conread position: 53-415
Cow position: chr22:12431004-12430643 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 53-420
Cow position: chr22:12475653-12475287 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 53-437
Cow position: chr22:12499606-12499991 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 369, 73

Conread position: 53-448
Cow position: chr22:12399696-12399302 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 53-448
Cow position: chr22:12431424-12431030 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 74

Conread position: 53-449
Cow position: chr22:11640754-11641149 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 53-449
Cow position: chr22:12385436-12385039 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 257
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 31, 70

Conread position: 53-450
Cow position: chr22:12476409-12476013 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 77

Conread position: 53-450
Cow position: chr22:14430130-14430526 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 243
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 161, 66

Conread position: 53-451
Cow position: chr22:12419232-12418818 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 240
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 203, 67

Conread position: 53-454
Cow position: chr22:11701165-11701565 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 241
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 63, 78

Conread position: 53-454
Cow position: chr22:12385688-12385286 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 261
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 24, 18

Conread position: 53-454
Cow position: chr22:12458292-12457892 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 79

Conread position: 53-454
Cow position: chr22:14429962-14430362 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 246
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 97

Conread position: 53-456
Cow position: chr22:12399780-12399377 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 261
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 397, 79

Conread position: 53-456
Cow position: chr22:12475989-12475587 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 79

Conread position: 57-375
Cow position: chr22:12544733-12545050 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 192
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 57-419
Cow position: chr22:11666599-11666960 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 226
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 245, 68

Conread position: 57-450
Cow position: chr22:11701253-11701645 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 239
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 314, 71

Conread position: 57-451
Cow position: chr22:12458624-12458231 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 0

Conread position: 57-456
Cow position: chr22:46654081-46654479 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 264
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 234, 62

Conread position: 58-427
Cow position: chr22:14430555-14430923 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 228
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 80, 59

Conread position: 58-450
Cow position: chr22:14429883-14430274 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 248
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 75, 92

Conread position: 61-451
Cow position: chr22:14430474-14430863 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 240
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 226, 59

Conread position: 61-451
Cow position: chr22:14468131-14468520 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 245
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 89

Conread position: 62-449
Cow position: chr22:14430223-14430609 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 237
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 225, 61

Conread position: 62-450
Cow position: chr22:14429803-14430190 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 245
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 263, 76

Conread position: 67-451
Cow position: chr22:14429640-14430023 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 242
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 232, 63

Conread position: 69-448
Cow position: chr22:12432332-12431954 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 248
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 224, 52

Conread position: 69-450
Cow position: chr22:12432164-12431784 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 239
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 57, 0

Conread position: 71-442
Cow position: chr22:12432498-12432128 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 235
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 222, 61

Conread position: 77-439
Cow position: chr22:12399840-12399479 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 231
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 55, 0

Conread position: 83-450
Cow position: chr22:12419017-12418651 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 47

Conread position: 87-450
Cow position: chr22:11666461-11666823 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 222
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 124, 43

Conread position: 87-454
Cow position: chr22:12399908-12399548 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 238
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 39, 0

Conread position: 138-450
Cow position: chr22:12498850-12499162 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 201
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 139-364
Cow position: chr22:12419315-12419090 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 154, 146

Conread position: 139-451
Cow position: chr22:12458627-12458315 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 201
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 70, 64

Conread position: 179-451
Cow position: chr22:11640627-11640899 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 171
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 60

Show alignments to all cow chromosomes.