Cow genome map
| Conread name: | Pig1-39F13 |
| Conread position: | 4-368 |
| Cow position: | chr23:24522553-24522190 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 48, 22 |
| Conread position: | 4-422 |
| Cow position: | chr23:24535946-24535529 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 272 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 50, 22 |
| Conread position: | 4-449 |
| Cow position: | chr23:24547315-24546871 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 18 |
| Conread position: | 5-454 |
| Cow position: | chr23:25626466-25626911 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 283 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 50, 29 |
| Conread position: | 13-333 |
| Cow position: | chr23:24654057-24654376 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 41, 14 |
| Conread position: | 13-420 |
| Cow position: | chr23:24639660-24640066 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 267 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 37, 14 |
| Conread position: | 13-448 |
| Cow position: | chr23:25626054-25626488 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 277 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 37, 17 |
| Conread position: | 13-454 |
| Cow position: | chr23:24639576-24640016 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 277 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 14-258 |
| Cow position: | chr23:24654142-24654385 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 14-360 |
| Cow position: | chr23:25626724-25627071 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 227 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 14-364 |
| Cow position: | chr23:24535768-24535418 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 222 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 40, 12 |
| Conread position: | 14-367 |
| Cow position: | chr23:25724102-25723750 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 14-415 |
| Cow position: | chr23:25626640-25627040 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 14-424 |
| Cow position: | chr23:24626333-24626742 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 14-448 |
| Cow position: | chr23:25626223-25626653 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 14-450 |
| Cow position: | chr23:24560697-24560262 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 12 |
| Conread position: | 14-454 |
| Cow position: | chr23:24560529-24560091 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 14-454 |
| Cow position: | chr23:24639325-24639764 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 280 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 38, 13 |
| Conread position: | 14-454 |
| Cow position: | chr23:25660260-25660699 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 8 |
| Conread position: | 14-456 |
| Cow position: | chr23:25626307-25626745 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 277 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 38, 12 |
| Conread position: | 17-451 |
| Cow position: | chr23:24560861-24560429 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 10 |
| Conread position: | 17-451 |
| Cow position: | chr23:25660180-25660612 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 284 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 35, 10 |
| Conread position: | 22-235 |
| Cow position: | chr23:25723927-25723714 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 32, 106 |
| Conread position: | 27-449 |
| Cow position: | chr23:24639253-24639675 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 276 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 27, 104 |
| Conread position: | 28-454 |
| Cow position: | chr23:25625901-25626326 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 271 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 25, 41 |
| Conread position: | 34-452 |
| Cow position: | chr23:25698613-25698194 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 264 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 7, 95 |
| Conread position: | 34-454 |
| Cow position: | chr23:24626268-24626688 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 35 |
| Conread position: | 35-259 |
| Cow position: | chr23:24546865-24546641 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 18, 98 |
| Conread position: | 35-449 |
| Cow position: | chr23:24547117-24546703 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 96 |
| Conread position: | 39-396 |
| Cow position: | chr23:25698439-25698082 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 15, 92 |
| Conread position: | 39-416 |
| Cow position: | chr23:24547029-24546652 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 94 |
| Conread position: | 53-451 |
| Cow position: | chr23:25698676-25698279 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 223, 64 |
| Conread position: | 53-452 |
| Cow position: | chr23:24535981-24535583 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 83 |
| Conread position: | 53-454 |
| Cow position: | chr23:24639448-24639848 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 254 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 145, 74 |
| Conread position: | 53-454 |
| Cow position: | chr23:25626595-25626995 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 243, 79 |
| Conread position: | 53-456 |
| Cow position: | chr23:24560742-24560340 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 156, 74 |
| Conread position: | 61-454 |
| Cow position: | chr23:24560902-24560510 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 237, 66 |
| Conread position: | 61-456 |
| Cow position: | chr23:24547174-24546780 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 69 |
| Conread position: | 65-455 |
| Cow position: | chr23:24522576-24522187 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 67 |
| Conread position: | 67-454 |
| Cow position: | chr23:25660145-25660531 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 73-451 |
| Cow position: | chr23:24547330-24546953 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 74-442 |
| Cow position: | chr23:24639217-24639584 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 83-279 |
| Cow position: | chr23:24521968-24521773 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 83-454 |
| Cow position: | chr23:24654043-24654415 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 341, 49 |
| Conread position: | 174-454 |
| Cow position: | chr23:25724111-25723831 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 35, 17 |
Show alignments to all cow chromosomes.