Cow genome map
| Conread name: | Pig1-39F13 | 
| Conread position: | 5-451 | 
| Cow position: | chr6:49428243-49428688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 50, 17 | 
| Conread position: | 5-454 | 
| Cow position: | chr6:49340671-49341119 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 17 | 
| Conread position: | 14-421 | 
| Cow position: | chr6:49341016-49341422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 13 | 
| Conread position: | 14-454 | 
| Cow position: | chr6:49429008-49429447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 41, 8 | 
| Conread position: | 26-358 | 
| Cow position: | chr6:49396580-49396912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 23, 102 | 
| Conread position: | 26-451 | 
| Cow position: | chr6:49396244-49396669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 9e-32 | 
| Alignm gaps (pig, cow): | 22, 110 | 
| Conread position: | 31-442 | 
| Cow position: | chr6:49340360-49340771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 103 | 
| Conread position: | 46-454 | 
| Cow position: | chr6:49340304-49340699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 22 | 
| Conread position: | 53-367 | 
| Cow position: | chr6:49341139-49341451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 150, 73 | 
| Conread position: | 53-443 | 
| Cow position: | chr6:49396524-49396913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 135, 82 | 
| Conread position: | 53-450 | 
| Cow position: | chr6:49340971-49341367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 158, 65 | 
| Conread position: | 53-451 | 
| Cow position: | chr6:49340551-49340948 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 68 | 
| Conread position: | 53-451 | 
| Cow position: | chr6:49340887-49341284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 53-454 | 
| Cow position: | chr6:49340803-49341203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 53-454 | 
| Cow position: | chr6:49428963-49429363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 135, 82 | 
| Conread position: | 53-456 | 
| Cow position: | chr6:49340467-49340869 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 0 | 
| Conread position: | 56-454 | 
| Cow position: | chr6:49396113-49396504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 325, 79 | 
Show alignments to all cow chromosomes.
