Cow genome map
| Conread name: | Pig1-39F13 |
| Conread position: | 4-209 |
| Cow position: | chr7:1440072-1440276 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 50, 27 |
| Conread position: | 4-281 |
| Cow position: | chr7:3180551-3180825 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 48, 23 |
| Conread position: | 4-405 |
| Cow position: | chr7:42878674-42878274 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 18 |
| Conread position: | 4-448 |
| Cow position: | chr7:1439822-1440263 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 279 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 50, 23 |
| Conread position: | 5-448 |
| Cow position: | chr7:3179712-3180154 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 20 |
| Conread position: | 5-449 |
| Cow position: | chr7:42879261-42878818 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 26 |
| Conread position: | 9-451 |
| Cow position: | chr7:42879173-42878732 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 17 |
| Conread position: | 13-282 |
| Cow position: | chr7:18390437-18390705 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 13 |
| Conread position: | 14-365 |
| Cow position: | chr7:1439915-1440264 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 40, 17 |
| Conread position: | 14-438 |
| Cow position: | chr7:1014465-1014882 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 261 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 40, 12 |
| Conread position: | 14-449 |
| Cow position: | chr7:3180393-3180825 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 14-449 |
| Cow position: | chr7:42879084-42878650 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 12 |
| Conread position: | 14-451 |
| Cow position: | chr7:11601079-11600643 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 12 |
| Conread position: | 14-454 |
| Cow position: | chr7:3180309-3180748 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 12 |
| Conread position: | 14-454 |
| Cow position: | chr7:18390018-18390457 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 40, 16 |
| Conread position: | 14-456 |
| Cow position: | chr7:3180225-3180666 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 8 |
| Conread position: | 17-443 |
| Cow position: | chr7:3179809-3180233 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 5 |
| Conread position: | 24-442 |
| Cow position: | chr7:1439504-1439922 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 268 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 30, 7 |
| Conread position: | 26-423 |
| Cow position: | chr7:1014224-1014621 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 29, 113 |
| Conread position: | 26-451 |
| Cow position: | chr7:3180068-3180493 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 105 |
| Conread position: | 26-456 |
| Cow position: | chr7:42878905-42878475 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 105 |
| Conread position: | 32-448 |
| Cow position: | chr7:1438290-1438706 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 33-365 |
| Cow position: | chr7:1438375-1438707 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 54 |
| Conread position: | 34-448 |
| Cow position: | chr7:42878813-42878399 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 97 |
| Conread position: | 36-450 |
| Cow position: | chr7:42878727-42878313 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 292 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 95 |
| Conread position: | 39-449 |
| Cow position: | chr7:3179997-3180407 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 94 |
| Conread position: | 39-454 |
| Cow position: | chr7:1014903-1015318 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 92 |
| Conread position: | 43-450 |
| Cow position: | chr7:11600883-11600476 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 84 |
| Conread position: | 48-364 |
| Cow position: | chr7:8325800-8326114 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 205 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 67, 5 |
| Conread position: | 48-421 |
| Cow position: | chr7:8243444-8243816 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 141, 90 |
| Conread position: | 48-449 |
| Cow position: | chr7:8277907-8278306 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 266 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 89, 5 |
| Conread position: | 48-451 |
| Cow position: | chr7:8242941-8243343 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 241, 90 |
| Conread position: | 48-451 |
| Cow position: | chr7:8243696-8244095 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 97, 71 |
| Conread position: | 50-451 |
| Cow position: | chr7:1014747-1015147 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 50-451 |
| Cow position: | chr7:11601211-11600811 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 52-454 |
| Cow position: | chr7:1015001-1015402 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 241, 78 |
| Conread position: | 53-280 |
| Cow position: | chr7:1015254-1015482 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 193, 79 |
| Conread position: | 53-448 |
| Cow position: | chr7:1439704-1440095 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 239, 63 |
| Conread position: | 53-451 |
| Cow position: | chr7:8325132-8325529 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 247 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 84, 97 |
| Conread position: | 53-451 |
| Cow position: | chr7:8325216-8325613 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 79, 65 |
| Conread position: | 53-454 |
| Cow position: | chr7:8277827-8278227 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 246, 61 |
| Conread position: | 53-454 |
| Cow position: | chr7:18390225-18390625 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 53-456 |
| Cow position: | chr7:3179928-3180330 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 56-403 |
| Cow position: | chr7:1439452-1439800 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 143, 69 |
| Conread position: | 56-456 |
| Cow position: | chr7:1014669-1015068 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 82 |
| Conread position: | 57-449 |
| Cow position: | chr7:42879377-42878986 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 255 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 35, 30 |
| Conread position: | 57-451 |
| Cow position: | chr7:8277327-8277720 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 174, 64 |
| Conread position: | 59-454 |
| Cow position: | chr7:1014090-1014484 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 111, 74 |
| Conread position: | 61-282 |
| Cow position: | chr7:8325896-8326116 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 61-450 |
| Cow position: | chr7:8324888-8325276 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 333, 61 |
| Conread position: | 61-450 |
| Cow position: | chr7:11434745-11434364 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 71, 57 |
| Conread position: | 61-451 |
| Cow position: | chr7:18390149-18390538 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 62 |
| Conread position: | 61-452 |
| Cow position: | chr7:8277415-8277805 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 76, 89 |
| Conread position: | 61-456 |
| Cow position: | chr7:1014842-1015236 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 372, 77 |
| Conread position: | 64-450 |
| Cow position: | chr7:8325563-8325948 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 225, 58 |
| Conread position: | 65-449 |
| Cow position: | chr7:8277671-8278054 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 74, 53 |
| Conread position: | 65-450 |
| Cow position: | chr7:8325732-8326116 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 247 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 52, 70 |
| Conread position: | 67-451 |
| Cow position: | chr7:8243379-8243762 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 14, 10 |
| Conread position: | 70-451 |
| Cow position: | chr7:8324729-8325109 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 145, 53 |
| Conread position: | 75-450 |
| Cow position: | chr7:18389995-18390369 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 54, 47 |
| Conread position: | 83-442 |
| Cow position: | chr7:8324826-8325184 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 130, 38 |
| Conread position: | 84-456 |
| Cow position: | chr7:42879434-42879063 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 38, 50 |
| Conread position: | 89-454 |
| Cow position: | chr7:3179712-3180076 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 138-368 |
| Cow position: | chr7:11434508-11434278 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 144-448 |
| Cow position: | chr7:1014258-1014562 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 197 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 154, 142 |
Show alignments to all cow chromosomes.