Cow genome map
| Conread name: | Pig1-40G11 |
| Conread position: | 134-375 |
| Cow position: | chr11:67545464-67545712 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 134-473 |
| Cow position: | chr11:32776959-32777305 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 9 |
| Conread position: | 134-473 |
| Cow position: | chr11:75260249-75259911 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 74 |
| Conread position: | 141-339 |
| Cow position: | chr11:37489648-37489446 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 155-468 |
| Cow position: | chr11:55010710-55011025 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 28 |
| Conread position: | 177-375 |
| Cow position: | chr11:43508912-43509110 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 128, 94 |
| Conread position: | 177-410 |
| Cow position: | chr11:64125329-64125093 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 107, 211 |
| Conread position: | 177-463 |
| Cow position: | chr11:13857972-13857683 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 87, 228 |
| Conread position: | 179-468 |
| Cow position: | chr11:26368350-26368055 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 89 |
| Conread position: | 206-471 |
| Cow position: | chr11:40620825-40620554 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 179, 0 |
| Conread position: | 215-441 |
| Cow position: | chr11:64888233-64887999 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 216-336 |
| Cow position: | chr11:17706754-17706635 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 216-342 |
| Cow position: | chr11:6605058-6604932 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 216-352 |
| Cow position: | chr11:5188468-5188333 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 217-468 |
| Cow position: | chr11:42471767-42472028 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 158 |
| Conread position: | 218-466 |
| Cow position: | chr11:37032173-37032428 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 119, 204 |
| Conread position: | 218-468 |
| Cow position: | chr11:37916011-37915753 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 76 |
| Conread position: | 218-471 |
| Cow position: | chr11:2421435-2421174 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 119, 88 |
| Conread position: | 218-471 |
| Cow position: | chr11:73450329-73450587 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 120, 80 |
| Conread position: | 218-471 |
| Cow position: | chr11:82102881-82103136 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 222 |
| Conread position: | 218-475 |
| Cow position: | chr11:48662652-48662920 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 268-469 |
| Cow position: | chr11:51329668-51329459 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 273-463 |
| Cow position: | chr11:5161872-5161672 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 65, 121 |
| Conread position: | 273-468 |
| Cow position: | chr11:7911390-7911590 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 273-468 |
| Cow position: | chr11:35428543-35428748 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 55, 23 |
| Conread position: | 273-468 |
| Cow position: | chr11:35643355-35643553 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 21 |
| Conread position: | 273-468 |
| Cow position: | chr11:35649285-35649084 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 273-468 |
| Cow position: | chr11:61518709-61518914 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 273-468 |
| Cow position: | chr11:76939364-76939165 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 273-473 |
| Cow position: | chr11:80806997-80807206 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 273-475 |
| Cow position: | chr11:4593079-4593275 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 62, 122 |
| Conread position: | 273-475 |
| Cow position: | chr11:8476765-8476992 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 273-475 |
| Cow position: | chr11:36239258-36239464 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 62, 122 |
| Conread position: | 273-475 |
| Cow position: | chr11:37008390-37008599 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 65, 160 |
| Conread position: | 273-475 |
| Cow position: | chr11:38643481-38643267 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 273-475 |
| Cow position: | chr11:73386301-73386509 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 26 |
| Conread position: | 273-475 |
| Cow position: | chr11:74535237-74535035 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 112, 159 |
| Conread position: | 274-461 |
| Cow position: | chr11:68981905-68982099 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 274-469 |
| Cow position: | chr11:28243066-28242863 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 64, 48 |
| Conread position: | 274-475 |
| Cow position: | chr11:70794804-70795017 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 64, 25 |
| Conread position: | 275-475 |
| Cow position: | chr11:5615802-5616014 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 63, 170 |
| Conread position: | 276-465 |
| Cow position: | chr11:7437399-7437205 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 62, 31 |
| Conread position: | 280-468 |
| Cow position: | chr11:44149206-44149012 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 284-468 |
| Cow position: | chr11:4396367-4396555 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 51, 14 |
Show alignments to all cow chromosomes.