Cow genome map
| Conread name: | Pig1-40G11 |
| Conread position: | 124-442 |
| Cow position: | chr12:12175875-12175545 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 52, 121 |
| Conread position: | 124-475 |
| Cow position: | chr12:24176772-24176426 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 19, 55 |
| Conread position: | 138-475 |
| Cow position: | chr12:13024943-13025293 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 140-352 |
| Cow position: | chr12:32954881-32955082 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 39, 49 |
| Conread position: | 152-475 |
| Cow position: | chr12:39317952-39318294 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 162-475 |
| Cow position: | chr12:30190125-30189812 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 111 |
| Conread position: | 206-355 |
| Cow position: | chr12:28545418-28545271 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 30 |
| Conread position: | 209-473 |
| Cow position: | chr12:15383202-15383473 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 202 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 129, 8 |
| Conread position: | 215-368 |
| Cow position: | chr12:30922283-30922129 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 215-458 |
| Cow position: | chr12:36596698-36596949 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 123, 7 |
| Conread position: | 215-474 |
| Cow position: | chr12:1435671-1435403 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 129, 101 |
| Conread position: | 215-475 |
| Cow position: | chr12:12010272-12010538 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 94 |
| Conread position: | 218-451 |
| Cow position: | chr12:24544935-24545178 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 218-471 |
| Cow position: | chr12:19189818-19189564 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 61, 21 |
| Conread position: | 219-475 |
| Cow position: | chr12:4475154-4475419 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 221-471 |
| Cow position: | chr12:19382918-19383178 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 193 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 92, 21 |
| Conread position: | 238-471 |
| Cow position: | chr12:5964108-5963869 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 139, 0 |
| Conread position: | 273-468 |
| Cow position: | chr12:8125823-8126021 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 63, 44 |
| Conread position: | 273-468 |
| Cow position: | chr12:11934744-11934543 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 65, 47 |
| Conread position: | 273-468 |
| Cow position: | chr12:18131814-18132010 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 65, 21 |
| Conread position: | 273-473 |
| Cow position: | chr12:10787596-10787387 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 273-475 |
| Cow position: | chr12:4309284-4309499 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 62, 84 |
| Conread position: | 273-475 |
| Cow position: | chr12:6268426-6268633 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 65, 13 |
| Conread position: | 273-475 |
| Cow position: | chr12:10353943-10354163 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 273-475 |
| Cow position: | chr12:12025505-12025292 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 273-475 |
| Cow position: | chr12:16913523-16913728 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 67, 49 |
| Conread position: | 273-475 |
| Cow position: | chr12:33561785-33561575 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 60, 146 |
| Conread position: | 274-468 |
| Cow position: | chr12:34544323-34544117 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 61, 190 |
| Conread position: | 274-471 |
| Cow position: | chr12:6068928-6068724 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 64, 10 |
| Conread position: | 274-475 |
| Cow position: | chr12:3588365-3588577 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 274-475 |
| Cow position: | chr12:15743435-15743225 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 64, 20 |
| Conread position: | 275-468 |
| Cow position: | chr12:30271328-30271129 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 63, 32 |
| Conread position: | 275-471 |
| Cow position: | chr12:27729867-27729661 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 276-474 |
| Cow position: | chr12:44952522-44952316 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 114, 63 |
| Conread position: | 287-468 |
| Cow position: | chr12:45178420-45178228 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 301-473 |
| Cow position: | chr12:47270705-47270523 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 81, 0 |
Show alignments to all cow chromosomes.