Cow genome map
| Conread name: | Pig1-40G11 |
| Conread position: | 138-316 |
| Cow position: | chr16:5428188-5428367 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 41, 7 |
| Conread position: | 138-471 |
| Cow position: | chr16:30800354-30800008 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 141-334 |
| Cow position: | chr16:17034414-17034219 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 145 |
| Conread position: | 144-475 |
| Cow position: | chr16:24571149-24571496 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 152 |
| Conread position: | 153-473 |
| Cow position: | chr16:52928301-52928628 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 192 |
| Conread position: | 155-471 |
| Cow position: | chr16:9574813-9575146 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 156-430 |
| Cow position: | chr16:46403990-46403721 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 55, 42 |
| Conread position: | 178-410 |
| Cow position: | chr16:19640241-19640012 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 125, 93 |
| Conread position: | 195-471 |
| Cow position: | chr16:43501757-43502044 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 214 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 195, 42 |
| Conread position: | 206-471 |
| Cow position: | chr16:49898459-49898731 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 209-468 |
| Cow position: | chr16:15878848-15879098 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 27, 88 |
| Conread position: | 215-468 |
| Cow position: | chr16:6160246-6160505 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 71 |
| Conread position: | 216-339 |
| Cow position: | chr16:27974491-27974616 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 216-352 |
| Cow position: | chr16:26065788-26065651 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 217-468 |
| Cow position: | chr16:32884802-32884541 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 40, 231 |
| Conread position: | 217-468 |
| Cow position: | chr16:33426689-33426427 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 192 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 217-468 |
| Cow position: | chr16:33595058-33594799 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 116, 237 |
| Conread position: | 218-368 |
| Cow position: | chr16:5249546-5249397 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 125, 21 |
| Conread position: | 218-400 |
| Cow position: | chr16:45572943-45572761 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 119, 177 |
| Conread position: | 218-465 |
| Cow position: | chr16:15126083-15125838 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 195 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 119, 46 |
| Conread position: | 218-471 |
| Cow position: | chr16:54011595-54011343 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 29 |
| Conread position: | 220-462 |
| Cow position: | chr16:33129260-33129505 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 118, 27 |
| Conread position: | 253-471 |
| Cow position: | chr16:9252534-9252769 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 273-424 |
| Cow position: | chr16:34760560-34760720 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 273-465 |
| Cow position: | chr16:42046897-42046695 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 273-466 |
| Cow position: | chr16:11810897-11810694 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 273-468 |
| Cow position: | chr16:564907-564698 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 273-468 |
| Cow position: | chr16:3593208-3593009 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 65, 9 |
| Conread position: | 273-468 |
| Cow position: | chr16:12525698-12525899 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 63, 25 |
| Conread position: | 273-468 |
| Cow position: | chr16:16436001-16436202 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 65, 32 |
| Conread position: | 273-468 |
| Cow position: | chr16:32034438-32034628 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 32 |
| Conread position: | 273-468 |
| Cow position: | chr16:33986200-33986405 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 273-471 |
| Cow position: | chr16:6087369-6087579 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 273-473 |
| Cow position: | chr16:25616263-25616056 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 65, 28 |
| Conread position: | 273-475 |
| Cow position: | chr16:6083791-6084005 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 273-475 |
| Cow position: | chr16:26791248-26791027 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 273-475 |
| Cow position: | chr16:39220204-39219998 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 62, 118 |
| Conread position: | 275-464 |
| Cow position: | chr16:16429856-16430052 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 275-468 |
| Cow position: | chr16:9569824-9569628 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 63, 30 |
| Conread position: | 275-468 |
| Cow position: | chr16:25612080-25611882 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 63, 16 |
| Conread position: | 275-468 |
| Cow position: | chr16:56872135-56872337 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 275-475 |
| Cow position: | chr16:43165019-43164808 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 298-475 |
| Cow position: | chr16:41581531-41581347 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 40, 97 |
Show alignments to all cow chromosomes.