Cow genome map
| Conread name: | Pig1-40G11 |
| Conread position: | 134-475 |
| Cow position: | chr21:13391308-13391634 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 245 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 44, 72 |
| Conread position: | 166-458 |
| Cow position: | chr21:22513201-22512896 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 117 |
| Conread position: | 177-345 |
| Cow position: | chr21:24893809-24893977 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 123, 61 |
| Conread position: | 177-463 |
| Cow position: | chr21:35696008-35695713 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 102, 45 |
| Conread position: | 206-467 |
| Cow position: | chr21:3790005-3789743 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 189 |
| Conread position: | 215-468 |
| Cow position: | chr21:1598039-1597779 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 122, 46 |
| Conread position: | 216-352 |
| Cow position: | chr21:7074325-7074188 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 216-468 |
| Cow position: | chr21:24428981-24429245 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 196 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 216-468 |
| Cow position: | chr21:26575914-26576172 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 78, 31 |
| Conread position: | 217-465 |
| Cow position: | chr21:2988520-2988264 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 195 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 116, 14 |
| Conread position: | 217-468 |
| Cow position: | chr21:2523396-2523655 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 121, 59 |
| Conread position: | 273-465 |
| Cow position: | chr21:7125678-7125482 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 65, 36 |
| Conread position: | 273-465 |
| Cow position: | chr21:14780252-14780450 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 273-465 |
| Cow position: | chr21:39277482-39277679 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 62, 33 |
| Conread position: | 273-468 |
| Cow position: | chr21:8913264-8913060 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 65, 37 |
| Conread position: | 273-468 |
| Cow position: | chr21:9293453-9293248 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 273-468 |
| Cow position: | chr21:9975428-9975228 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 65, 34 |
| Conread position: | 273-468 |
| Cow position: | chr21:10813823-10813628 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 138, 101 |
| Conread position: | 273-468 |
| Cow position: | chr21:15642354-15642553 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 33 |
| Conread position: | 273-468 |
| Cow position: | chr21:41838289-41838494 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 273-471 |
| Cow position: | chr21:25759832-25759627 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 65, 49 |
| Conread position: | 273-474 |
| Cow position: | chr21:8907087-8906877 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 62, 207 |
| Conread position: | 273-475 |
| Cow position: | chr21:10838400-10838187 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 65, 179 |
| Conread position: | 273-475 |
| Cow position: | chr21:11734934-11734717 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 274-471 |
| Cow position: | chr21:39736412-39736619 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 274-475 |
| Cow position: | chr21:21565091-21565301 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 5, 18 |
| Conread position: | 275-462 |
| Cow position: | chr21:22054620-22054417 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 275-468 |
| Cow position: | chr21:32432505-32432708 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 275-475 |
| Cow position: | chr21:24983164-24983369 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 63, 106 |
| Conread position: | 275-475 |
| Cow position: | chr21:39251177-39251388 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 62, 85 |
| Conread position: | 276-475 |
| Cow position: | chr21:19372524-19372742 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 59, 0 |
Show alignments to all cow chromosomes.