Cow genome map
| Conread name: | Pig1-40G11 |
| Conread position: | 127-388 |
| Cow position: | chr3:552855-552587 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 27, 16 |
| Conread position: | 134-468 |
| Cow position: | chr3:9188276-9187957 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 245 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 204, 47 |
| Conread position: | 134-468 |
| Cow position: | chr3:29842759-29842425 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 54 |
| Conread position: | 134-473 |
| Cow position: | chr3:62740268-62739938 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 252 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 46, 73 |
| Conread position: | 138-394 |
| Cow position: | chr3:81527217-81527477 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 41, 21 |
| Conread position: | 138-463 |
| Cow position: | chr3:21656907-21656552 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 43, 130 |
| Conread position: | 140-463 |
| Cow position: | chr3:69810141-69810478 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 228 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 55, 41 |
| Conread position: | 145-473 |
| Cow position: | chr3:74406895-74406571 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 155 |
| Conread position: | 160-471 |
| Cow position: | chr3:28717043-28716744 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 229 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 19, 210 |
| Conread position: | 162-339 |
| Cow position: | chr3:25154660-25154841 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 177-424 |
| Cow position: | chr3:61962747-61962996 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 127, 88 |
| Conread position: | 177-463 |
| Cow position: | chr3:5169267-5168989 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 126, 20 |
| Conread position: | 177-463 |
| Cow position: | chr3:84871946-84872231 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 203 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 126, 213 |
| Conread position: | 178-439 |
| Cow position: | chr3:548426-548164 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 125, 90 |
| Conread position: | 208-463 |
| Cow position: | chr3:7813186-7813458 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 208-471 |
| Cow position: | chr3:21278001-21278253 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 215-400 |
| Cow position: | chr3:60492364-60492179 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 118, 180 |
| Conread position: | 215-400 |
| Cow position: | chr3:63496177-63495984 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 45, 188 |
| Conread position: | 215-462 |
| Cow position: | chr3:54563764-54563508 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 193 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 67, 43 |
| Conread position: | 215-474 |
| Cow position: | chr3:7146445-7146713 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 175, 122 |
| Conread position: | 215-475 |
| Cow position: | chr3:36747970-36747701 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 119, 11 |
| Conread position: | 216-454 |
| Cow position: | chr3:59579309-59579064 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 121, 60 |
| Conread position: | 218-471 |
| Cow position: | chr3:51414955-51414694 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 51, 66 |
| Conread position: | 240-471 |
| Cow position: | chr3:28629846-28630085 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 136, 196 |
| Conread position: | 243-468 |
| Cow position: | chr3:60535803-60535574 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 181 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 95, 115 |
| Conread position: | 261-471 |
| Cow position: | chr3:48337812-48337598 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 18, 136 |
| Conread position: | 273-464 |
| Cow position: | chr3:5640981-5640786 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 65, 18 |
| Conread position: | 273-465 |
| Cow position: | chr3:81576929-81576726 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 273-468 |
| Cow position: | chr3:2119510-2119308 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 273-468 |
| Cow position: | chr3:6950089-6950288 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 65, 32 |
| Conread position: | 273-468 |
| Cow position: | chr3:24503367-24503567 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 273-468 |
| Cow position: | chr3:30245941-30245736 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 62, 122 |
| Conread position: | 273-468 |
| Cow position: | chr3:48566140-48565934 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 273-471 |
| Cow position: | chr3:24156330-24156534 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 273-472 |
| Cow position: | chr3:13636422-13636632 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 273-474 |
| Cow position: | chr3:23034868-23035078 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 112, 25 |
| Conread position: | 273-475 |
| Cow position: | chr3:2085789-2085580 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 118, 25 |
| Conread position: | 273-475 |
| Cow position: | chr3:81368136-81368342 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 14, 34 |
| Conread position: | 289-468 |
| Cow position: | chr3:54325341-54325532 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
Show alignments to all cow chromosomes.