Cow genome map
| Conread name: | Pig1-40G11 |
| Conread position: | 15-156 |
| Cow position: | chr4:3671169-3671311 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 130-471 |
| Cow position: | chr4:67313265-67312946 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 289, 15 |
| Conread position: | 133-390 |
| Cow position: | chr4:13391206-13390945 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 41, 5 |
| Conread position: | 135-468 |
| Cow position: | chr4:43404299-43404629 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 12 |
| Conread position: | 138-471 |
| Cow position: | chr4:42962086-42961770 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 139-331 |
| Cow position: | chr4:32300755-32300949 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 135 |
| Conread position: | 141-468 |
| Cow position: | chr4:32008722-32008398 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 37, 74 |
| Conread position: | 162-388 |
| Cow position: | chr4:66013611-66013838 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 162-468 |
| Cow position: | chr4:121662-121969 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 17, 56 |
| Conread position: | 177-461 |
| Cow position: | chr4:31180443-31180169 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 127, 147 |
| Conread position: | 181-450 |
| Cow position: | chr4:62625493-62625223 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 73, 65 |
| Conread position: | 215-468 |
| Cow position: | chr4:44847221-44847475 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 122, 68 |
| Conread position: | 215-474 |
| Cow position: | chr4:53659142-53658876 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 195 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 227-475 |
| Cow position: | chr4:21005791-21005538 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 197 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 110, 208 |
| Conread position: | 230-471 |
| Cow position: | chr4:10861179-10861422 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 165 |
| Conread position: | 235-475 |
| Cow position: | chr4:68407234-68406983 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 273-365 |
| Cow position: | chr4:43713168-43713075 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 273-468 |
| Cow position: | chr4:41852846-41853050 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 65, 37 |
| Conread position: | 273-468 |
| Cow position: | chr4:45462437-45462230 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 273-468 |
| Cow position: | chr4:50629736-50629537 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 273-468 |
| Cow position: | chr4:55844521-55844727 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 64, 74 |
| Conread position: | 273-468 |
| Cow position: | chr4:57262872-57262667 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 66, 18 |
| Conread position: | 273-468 |
| Cow position: | chr4:62609853-62609648 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 51 |
| Conread position: | 273-471 |
| Cow position: | chr4:10489904-10489699 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 65, 15 |
| Conread position: | 273-475 |
| Cow position: | chr4:4952250-4952043 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 63, 25 |
| Conread position: | 273-475 |
| Cow position: | chr4:13516047-13515834 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 66, 118 |
| Conread position: | 273-475 |
| Cow position: | chr4:37488964-37489163 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 274-468 |
| Cow position: | chr4:29644-29831 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 137, 24 |
| Conread position: | 274-468 |
| Cow position: | chr4:63218256-63218449 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 61, 29 |
| Conread position: | 275-468 |
| Cow position: | chr4:64698082-64697885 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 61, 16 |
| Conread position: | 275-468 |
| Cow position: | chr4:68071824-68072020 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 60, 35 |
| Conread position: | 278-471 |
| Cow position: | chr4:19447588-19447383 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 282-475 |
| Cow position: | chr4:66930193-66930394 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 53, 145 |
| Conread position: | 306-468 |
| Cow position: | chr4:64701429-64701600 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 149 |
Show alignments to all cow chromosomes.