Cow genome map

Conread name: Pig1-40G11

Conread position: 134-288
Cow position: chr5:32043351-32043508 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 11

Conread position: 134-329
Cow position: chr5:63308089-63308284 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 21, 67

Conread position: 135-462
Cow position: chr5:64370946-64370619 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 237
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 44, 91

Conread position: 138-375
Cow position: chr5:2425072-2425306 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 41, 85

Conread position: 138-475
Cow position: chr5:18380978-18380628 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 165

Conread position: 139-461
Cow position: chr5:48284137-48284473 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 239
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 33, 308

Conread position: 139-462
Cow position: chr5:44134715-44134386 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 232
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 40, 84

Conread position: 139-468
Cow position: chr5:48478770-48478447 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 240
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 201, 42

Conread position: 139-468
Cow position: chr5:56623601-56623920 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 240
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 204, 42

Conread position: 151-390
Cow position: chr5:40699490-40699252 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 10

Conread position: 153-331
Cow position: chr5:73572656-73572477 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 26, 83

Conread position: 162-331
Cow position: chr5:29571979-29571807 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 66

Conread position: 177-378
Cow position: chr5:35622953-35622751 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 41, 168

Conread position: 177-461
Cow position: chr5:56634966-56634683 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 209
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 168, 69

Conread position: 177-464
Cow position: chr5:51577042-51576747 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 211
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 126, 210

Conread position: 179-327
Cow position: chr5:75036579-75036725 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 179-468
Cow position: chr5:36670153-36669859 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 125

Conread position: 185-460
Cow position: chr5:17848398-17848682 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 268

Conread position: 215-468
Cow position: chr5:42714285-42714036 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 128, 24

Conread position: 216-468
Cow position: chr5:69526809-69527074 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 119, 0

Conread position: 216-473
Cow position: chr5:64183512-64183247 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 119, 15

Conread position: 217-374
Cow position: chr5:43463512-43463670 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 126
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 118, 0

Conread position: 247-473
Cow position: chr5:66307980-66307753 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 121, 91

Conread position: 272-471
Cow position: chr5:64123461-64123673 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 273-378
Cow position: chr5:64068278-64068384 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 273-400
Cow position: chr5:44912175-44912048 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 122

Conread position: 273-455
Cow position: chr5:50994907-50994715 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 66, 0

Conread position: 273-462
Cow position: chr5:36405833-36405637 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 62, 12

Conread position: 273-465
Cow position: chr5:11443856-11443660 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 37

Conread position: 273-465
Cow position: chr5:34469796-34469607 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 21

Conread position: 273-466
Cow position: chr5:22185663-22185472 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 65, 25

Conread position: 273-466
Cow position: chr5:69122206-69122008 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 117, 65

Conread position: 273-468
Cow position: chr5:33910773-33910975 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 32

Conread position: 273-468
Cow position: chr5:33983374-33983175 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 65, 25

Conread position: 273-468
Cow position: chr5:44490725-44490926 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 65, 156

Conread position: 273-468
Cow position: chr5:46821461-46821643 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 66, 21

Conread position: 273-468
Cow position: chr5:47724509-47724308 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 65, 32

Conread position: 273-468
Cow position: chr5:59786751-59786546 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 64, 0

Conread position: 273-468
Cow position: chr5:60916733-60916530 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 174

Conread position: 273-471
Cow position: chr5:43156463-43156671 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 163
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 65, 0

Conread position: 273-471
Cow position: chr5:48250501-48250702 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 65, 34

Conread position: 273-473
Cow position: chr5:25483479-25483683 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 25

Conread position: 273-473
Cow position: chr5:65144140-65143938 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 155
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 60, 23

Conread position: 273-475
Cow position: chr5:19683479-19683265 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 273-475
Cow position: chr5:20656980-20657189 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 34

Conread position: 273-475
Cow position: chr5:55295586-55295799 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 65, 18

Conread position: 273-475
Cow position: chr5:60124967-60125176 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 65, 25

Conread position: 273-475
Cow position: chr5:75409367-75409159 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 65, 17

Conread position: 274-468
Cow position: chr5:48047361-48047163 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 64, 24

Conread position: 274-473
Cow position: chr5:8771022-8771231 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 274-475
Cow position: chr5:60182962-60183170 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 64, 24

Conread position: 276-468
Cow position: chr5:58447898-58448103 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 22

Conread position: 277-468
Cow position: chr5:47491119-47490926 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 61, 30

Conread position: 295-475
Cow position: chr5:14855912-14856103 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 303-475
Cow position: chr5:13198730-13198914 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 310-471
Cow position: chr5:32043510-32043677 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 70, 17

Show alignments to all cow chromosomes.