Cow genome map
Conread name: | Pig1-40G11 |
Conread position: | 134-288 |
Cow position: | chr5:32043351-32043508 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 118 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 44, 11 |
Conread position: | 134-329 |
Cow position: | chr5:63308089-63308284 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 138 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 21, 67 |
Conread position: | 135-462 |
Cow position: | chr5:64370946-64370619 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 237 |
Alignm E-value: | 6e-37 |
Alignm gaps (pig, cow): | 44, 91 |
Conread position: | 138-375 |
Cow position: | chr5:2425072-2425306 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 171 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 41, 85 |
Conread position: | 138-475 |
Cow position: | chr5:18380978-18380628 (view UCSC Genome Browser custom track) |
Alignm length: | 354 |
Alignm identity: | 254 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 165 |
Conread position: | 139-461 |
Cow position: | chr5:48284137-48284473 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 239 |
Alignm E-value: | 3.9937e-43 |
Alignm gaps (pig, cow): | 33, 308 |
Conread position: | 139-462 |
Cow position: | chr5:44134715-44134386 (view UCSC Genome Browser custom track) |
Alignm length: | 338 |
Alignm identity: | 232 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 40, 84 |
Conread position: | 139-468 |
Cow position: | chr5:48478770-48478447 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 240 |
Alignm E-value: | 3e-40 |
Alignm gaps (pig, cow): | 201, 42 |
Conread position: | 139-468 |
Cow position: | chr5:56623601-56623920 (view UCSC Genome Browser custom track) |
Alignm length: | 341 |
Alignm identity: | 240 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 204, 42 |
Conread position: | 151-390 |
Cow position: | chr5:40699490-40699252 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 158 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 28, 10 |
Conread position: | 153-331 |
Cow position: | chr5:73572656-73572477 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 131 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 26, 83 |
Conread position: | 162-331 |
Cow position: | chr5:29571979-29571807 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 123 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 17, 66 |
Conread position: | 177-378 |
Cow position: | chr5:35622953-35622751 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 143 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 41, 168 |
Conread position: | 177-461 |
Cow position: | chr5:56634966-56634683 (view UCSC Genome Browser custom track) |
Alignm length: | 295 |
Alignm identity: | 209 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 168, 69 |
Conread position: | 177-464 |
Cow position: | chr5:51577042-51576747 (view UCSC Genome Browser custom track) |
Alignm length: | 298 |
Alignm identity: | 211 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 126, 210 |
Conread position: | 179-327 |
Cow position: | chr5:75036579-75036725 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 112 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 179-468 |
Cow position: | chr5:36670153-36669859 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 226 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 176, 125 |
Conread position: | 185-460 |
Cow position: | chr5:17848398-17848682 (view UCSC Genome Browser custom track) |
Alignm length: | 286 |
Alignm identity: | 213 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 268 |
Conread position: | 215-468 |
Cow position: | chr5:42714285-42714036 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 178 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 128, 24 |
Conread position: | 216-468 |
Cow position: | chr5:69526809-69527074 (view UCSC Genome Browser custom track) |
Alignm length: | 266 |
Alignm identity: | 199 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 119, 0 |
Conread position: | 216-473 |
Cow position: | chr5:64183512-64183247 (view UCSC Genome Browser custom track) |
Alignm length: | 270 |
Alignm identity: | 198 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 119, 15 |
Conread position: | 217-374 |
Cow position: | chr5:43463512-43463670 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 126 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 118, 0 |
Conread position: | 247-473 |
Cow position: | chr5:66307980-66307753 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 165 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 121, 91 |
Conread position: | 272-471 |
Cow position: | chr5:64123461-64123673 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 148 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 273-378 |
Cow position: | chr5:64068278-64068384 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 87 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 273-400 |
Cow position: | chr5:44912175-44912048 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 101 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 62, 122 |
Conread position: | 273-455 |
Cow position: | chr5:50994907-50994715 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 149 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 273-462 |
Cow position: | chr5:36405833-36405637 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 146 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 62, 12 |
Conread position: | 273-465 |
Cow position: | chr5:11443856-11443660 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 154 |
Alignm E-value: | 2e-38 |
Alignm gaps (pig, cow): | 65, 37 |
Conread position: | 273-465 |
Cow position: | chr5:34469796-34469607 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 149 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 62, 21 |
Conread position: | 273-466 |
Cow position: | chr5:22185663-22185472 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 150 |
Alignm E-value: | 8e-30 |
Alignm gaps (pig, cow): | 65, 25 |
Conread position: | 273-466 |
Cow position: | chr5:69122206-69122008 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 151 |
Alignm E-value: | 4e-33 |
Alignm gaps (pig, cow): | 117, 65 |
Conread position: | 273-468 |
Cow position: | chr5:33910773-33910975 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 146 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 63, 32 |
Conread position: | 273-468 |
Cow position: | chr5:33983374-33983175 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 147 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 65, 25 |
Conread position: | 273-468 |
Cow position: | chr5:44490725-44490926 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 154 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 65, 156 |
Conread position: | 273-468 |
Cow position: | chr5:46821461-46821643 (view UCSC Genome Browser custom track) |
Alignm length: | 197 |
Alignm identity: | 143 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 66, 21 |
Conread position: | 273-468 |
Cow position: | chr5:47724509-47724308 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 146 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 65, 32 |
Conread position: | 273-468 |
Cow position: | chr5:59786751-59786546 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 158 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 273-468 |
Cow position: | chr5:60916733-60916530 (view UCSC Genome Browser custom track) |
Alignm length: | 206 |
Alignm identity: | 151 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 21, 174 |
Conread position: | 273-471 |
Cow position: | chr5:43156463-43156671 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 163 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 273-471 |
Cow position: | chr5:48250501-48250702 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 147 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 65, 34 |
Conread position: | 273-473 |
Cow position: | chr5:25483479-25483683 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 152 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 65, 25 |
Conread position: | 273-473 |
Cow position: | chr5:65144140-65143938 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 155 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 60, 23 |
Conread position: | 273-475 |
Cow position: | chr5:19683479-19683265 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 155 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 273-475 |
Cow position: | chr5:20656980-20657189 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 157 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 65, 34 |
Conread position: | 273-475 |
Cow position: | chr5:55295586-55295799 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 157 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 65, 18 |
Conread position: | 273-475 |
Cow position: | chr5:60124967-60125176 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 157 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 65, 25 |
Conread position: | 273-475 |
Cow position: | chr5:75409367-75409159 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 153 |
Alignm E-value: | 5e-25 |
Alignm gaps (pig, cow): | 65, 17 |
Conread position: | 274-468 |
Cow position: | chr5:48047361-48047163 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 152 |
Alignm E-value: | 6e-27 |
Alignm gaps (pig, cow): | 64, 24 |
Conread position: | 274-473 |
Cow position: | chr5:8771022-8771231 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 154 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 274-475 |
Cow position: | chr5:60182962-60183170 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 156 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 64, 24 |
Conread position: | 276-468 |
Cow position: | chr5:58447898-58448103 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 148 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 47, 22 |
Conread position: | 277-468 |
Cow position: | chr5:47491119-47490926 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 150 |
Alignm E-value: | 9e-31 |
Alignm gaps (pig, cow): | 61, 30 |
Conread position: | 295-475 |
Cow position: | chr5:14855912-14856103 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 141 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 303-475 |
Cow position: | chr5:13198730-13198914 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 134 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 310-471 |
Cow position: | chr5:32043510-32043677 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 128 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 70, 17 |
Show alignments to all cow chromosomes.