Cow genome map
| Conread name: | Pig1-40G11 |
| Conread position: | 127-366 |
| Cow position: | chr6:42930086-42929849 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 22, 114 |
| Conread position: | 134-389 |
| Cow position: | chr6:3945518-3945260 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 134-471 |
| Cow position: | chr6:64705957-64706298 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 45, 95 |
| Conread position: | 138-471 |
| Cow position: | chr6:57964998-57965333 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 103 |
| Conread position: | 141-331 |
| Cow position: | chr6:67855-68048 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 38, 84 |
| Conread position: | 144-394 |
| Cow position: | chr6:42988764-42989016 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 147-471 |
| Cow position: | chr6:34023635-34023305 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 58 |
| Conread position: | 152-471 |
| Cow position: | chr6:6380165-6379838 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 29 |
| Conread position: | 153-471 |
| Cow position: | chr6:39706239-39706557 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 77 |
| Conread position: | 163-471 |
| Cow position: | chr6:54431126-54431439 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 130 |
| Conread position: | 177-316 |
| Cow position: | chr6:6812112-6812247 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 177-383 |
| Cow position: | chr6:2869562-2869767 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 16, 63 |
| Conread position: | 177-388 |
| Cow position: | chr6:24304044-24304251 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 160, 31 |
| Conread position: | 177-463 |
| Cow position: | chr6:43752094-43752373 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 115, 203 |
| Conread position: | 209-468 |
| Cow position: | chr6:25810297-25810038 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 201 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 133, 13 |
| Conread position: | 212-474 |
| Cow position: | chr6:48024249-48023980 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 233 |
| Conread position: | 215-468 |
| Cow position: | chr6:434879-435131 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 191 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 118, 213 |
| Conread position: | 218-400 |
| Cow position: | chr6:19709545-19709724 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 122, 17 |
| Conread position: | 218-423 |
| Cow position: | chr6:59988558-59988346 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 114, 24 |
| Conread position: | 273-375 |
| Cow position: | chr6:29690184-29690287 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 273-468 |
| Cow position: | chr6:49099520-49099322 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 65, 34 |
| Conread position: | 273-468 |
| Cow position: | chr6:49414256-49414467 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 273-468 |
| Cow position: | chr6:54879735-54879531 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 64, 180 |
| Conread position: | 273-468 |
| Cow position: | chr6:61431634-61431836 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 62, 153 |
| Conread position: | 273-471 |
| Cow position: | chr6:60373601-60373798 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 117, 13 |
| Conread position: | 273-471 |
| Cow position: | chr6:61211838-61211637 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 65, 12 |
| Conread position: | 273-475 |
| Cow position: | chr6:27636244-27636030 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 66, 25 |
| Conread position: | 273-475 |
| Cow position: | chr6:53148143-53148340 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 62, 114 |
| Conread position: | 274-466 |
| Cow position: | chr6:25627753-25627554 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 63, 161 |
| Conread position: | 275-468 |
| Cow position: | chr6:56674598-56674395 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 285-468 |
| Cow position: | chr6:27578483-27578681 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 291-471 |
| Cow position: | chr6:6812364-6812553 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 9, 24 |
| Conread position: | 292-468 |
| Cow position: | chr6:58916739-58916555 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 16, 6 |
| Conread position: | 354-468 |
| Cow position: | chr6:14099556-14099436 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 374-475 |
| Cow position: | chr6:29690549-29690653 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 87 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
Show alignments to all cow chromosomes.