Cow genome map
| Conread name: | Pig1-40G11 |
| Conread position: | 134-468 |
| Cow position: | chr9:31545191-31544855 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 11 |
| Conread position: | 135-471 |
| Cow position: | chr9:6269233-6269577 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 246 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 43, 27 |
| Conread position: | 136-462 |
| Cow position: | chr9:10889284-10888948 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 249 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 36, 71 |
| Conread position: | 138-331 |
| Cow position: | chr9:41005864-41005667 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 139-475 |
| Cow position: | chr9:39045392-39045064 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 13 |
| Conread position: | 141-471 |
| Cow position: | chr9:48070435-48070103 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 64 |
| Conread position: | 141-475 |
| Cow position: | chr9:7056688-7057034 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 162-331 |
| Cow position: | chr9:1870646-1870818 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 18, 81 |
| Conread position: | 177-463 |
| Cow position: | chr9:51767908-51767597 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 177-469 |
| Cow position: | chr9:21103153-21103451 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 0 |
| Conread position: | 197-471 |
| Cow position: | chr9:43834162-43833882 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 8 |
| Conread position: | 215-466 |
| Cow position: | chr9:61312621-61312872 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 50 |
| Conread position: | 216-339 |
| Cow position: | chr9:36425944-36426067 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 217-468 |
| Cow position: | chr9:30111129-30111392 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 218-468 |
| Cow position: | chr9:61445889-61445631 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 190 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 168, 61 |
| Conread position: | 219-468 |
| Cow position: | chr9:53332619-53332880 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 172, 28 |
| Conread position: | 220-468 |
| Cow position: | chr9:1020675-1020931 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 117, 86 |
| Conread position: | 243-471 |
| Cow position: | chr9:11425180-11425423 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 273-367 |
| Cow position: | chr9:32643031-32642937 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 83 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 64, 25 |
| Conread position: | 273-458 |
| Cow position: | chr9:35183488-35183292 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 273-459 |
| Cow position: | chr9:41902661-41902462 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 273-465 |
| Cow position: | chr9:10969500-10969691 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 102, 37 |
| Conread position: | 273-468 |
| Cow position: | chr9:4961607-4961405 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 65, 23 |
| Conread position: | 273-468 |
| Cow position: | chr9:26700529-26700727 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 54, 46 |
| Conread position: | 273-468 |
| Cow position: | chr9:27372883-27372680 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 64, 154 |
| Conread position: | 273-468 |
| Cow position: | chr9:45947091-45947279 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 34 |
| Conread position: | 273-468 |
| Cow position: | chr9:50464838-50464638 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 65, 24 |
| Conread position: | 273-468 |
| Cow position: | chr9:52009717-52009916 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 273-469 |
| Cow position: | chr9:21653046-21652847 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 273-471 |
| Cow position: | chr9:35837032-35837237 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 68, 32 |
| Conread position: | 273-474 |
| Cow position: | chr9:21424711-21424496 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 273-474 |
| Cow position: | chr9:58399467-58399261 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 65, 34 |
| Conread position: | 273-475 |
| Cow position: | chr9:28850456-28850661 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 66, 24 |
| Conread position: | 273-475 |
| Cow position: | chr9:38864171-38864380 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 112, 21 |
| Conread position: | 274-475 |
| Cow position: | chr9:26734950-26734756 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 64, 24 |
| Conread position: | 275-468 |
| Cow position: | chr9:45229308-45229505 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 275-471 |
| Cow position: | chr9:35191734-35191528 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 277-475 |
| Cow position: | chr9:48518555-48518760 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 167 |
| Conread position: | 315-471 |
| Cow position: | chr9:11359332-11359168 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 354-468 |
| Cow position: | chr9:32642787-32642664 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 36, 0 |
Show alignments to all cow chromosomes.