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Cow genome map

           
Conread name:
           
Pig1-44A05
        

               
Conread position:
               
1-425
               

               
Cow position:
               
chr17:923611-924035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 87
               

               
Conread position:
               
2-424
               

               
Cow position:
               
chr17:30718684-30718255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 43
               

               
Conread position:
               
2-438
               

               
Cow position:
               
chr17:9117375-9117821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 192
               

               
Conread position:
               
2-508
               

               
Cow position:
               
chr17:34595676-34596172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 59
               

               
Conread position:
               
3-178
               

               
Cow position:
               
chr17:2275007-2275182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
73, 142
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr17:23517434-23517254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
3-186
               

               
Cow position:
               
chr17:40802545-40802725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
73, 141
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr17:16117695-16117468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
78, 22
               

               
Conread position:
               
3-265
               

               
Cow position:
               
chr17:5246618-5246897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
3-276
               

               
Cow position:
               
chr17:21874583-21874289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
78, 130
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr17:40892887-40893191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
3-301
               

               
Cow position:
               
chr17:27305896-27306200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
11, 15
               

               
Conread position:
               
3-308
               

               
Cow position:
               
chr17:32651349-32651665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
75, 278
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr17:1295838-1295517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 279
               

               
Conread position:
               
3-315
               

               
Cow position:
               
chr17:20358611-20358920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
61, 112
               

               
Conread position:
               
3-321
               

               
Cow position:
               
chr17:13143949-13143628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
75, 42
               

               
Conread position:
               
3-331
               

               
Cow position:
               
chr17:3471148-3471489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
52, 275
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr17:24549903-24550248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
48, 80
               

               
Conread position:
               
3-366
               

               
Cow position:
               
chr17:23803199-23803565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
39, 106
               

               
Conread position:
               
3-395
               

               
Cow position:
               
chr17:11171529-11171925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
150, 140
               

               
Conread position:
               
3-403
               

               
Cow position:
               
chr17:5224136-5224542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 125
               

               
Conread position:
               
3-406
               

               
Cow position:
               
chr17:40421402-40421815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 185
               

               
Conread position:
               
3-412
               

               
Cow position:
               
chr17:7760737-7760322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
36, 193
               

               
Conread position:
               
3-412
               

               
Cow position:
               
chr17:30539516-30539119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 145
               

               
Conread position:
               
3-415
               

               
Cow position:
               
chr17:25181413-25180997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
3-417
               

               
Cow position:
               
chr17:979401-979010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
200, 77
               

               
Conread position:
               
3-418
               

               
Cow position:
               
chr17:18592171-18592599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 193
               

               
Conread position:
               
3-419
               

               
Cow position:
               
chr17:21495110-21495529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 78
               

               
Conread position:
               
3-419
               

               
Cow position:
               
chr17:21680501-21680937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 215
               

               
Conread position:
               
3-420
               

               
Cow position:
               
chr17:26764750-26765182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 34
               

               
Conread position:
               
3-434
               

               
Cow position:
               
chr17:20126354-20126768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
148, 77
               

               
Conread position:
               
3-444
               

               
Cow position:
               
chr17:8690719-8690270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
53, 127
               

               
Conread position:
               
3-460
               

               
Cow position:
               
chr17:18109353-18108890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 286
               

               
Conread position:
               
3-475
               

               
Cow position:
               
chr17:34079365-34078897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 143
               

               
Conread position:
               
3-488
               

               
Cow position:
               
chr17:5350383-5349899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
3-488
               

               
Cow position:
               
chr17:14026182-14025683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 99
               

               
Conread position:
               
3-490
               

               
Cow position:
               
chr17:23101474-23100996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
3-493
               

               
Cow position:
               
chr17:14033914-14033412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 198
               

               
Conread position:
               
3-496
               

               
Cow position:
               
chr17:32138664-32138184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 33
               

               
Conread position:
               
3-496
               

               
Cow position:
               
chr17:43717575-43717108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 70
               

               
Conread position:
               
3-497
               

               
Cow position:
               
chr17:14249300-14248781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
74, 293
               

               
Conread position:
               
3-500
               

               
Cow position:
               
chr17:6936931-6936442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 223
               

               
Conread position:
               
3-500
               

               
Cow position:
               
chr17:20993307-20992802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 138
               

               
Conread position:
               
3-500
               

               
Cow position:
               
chr17:25900932-25901444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 89
               

               
Conread position:
               
3-500
               

               
Cow position:
               
chr17:29715453-29714978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 54
               

               
Conread position:
               
3-500
               

               
Cow position:
               
chr17:40393761-40394255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
39, 79
               

               
Conread position:
               
3-503
               

               
Cow position:
               
chr17:21973398-21972888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 78
               

               
Conread position:
               
3-503
               

               
Cow position:
               
chr17:40312461-40312938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
144, 33
               

               
Conread position:
               
3-504
               

               
Cow position:
               
chr17:9853719-9854222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 195
               

               
Conread position:
               
3-504
               

               
Cow position:
               
chr17:12289686-12289170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 234
               

               
Conread position:
               
3-504
               

               
Cow position:
               
chr17:16446696-16446186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 98
               

               
Conread position:
               
3-504
               

               
Cow position:
               
chr17:18201510-18202001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
3-504
               

               
Cow position:
               
chr17:20022784-20022274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 98
               

               
Conread position:
               
3-504
               

               
Cow position:
               
chr17:22032950-22032448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
117, 111
               

               
Conread position:
               
3-504
               

               
Cow position:
               
chr17:24823998-24824486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
169, 33
               

               
Conread position:
               
3-504
               

               
Cow position:
               
chr17:29292633-29292150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
3-506
               

               
Cow position:
               
chr17:13922211-13922724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 41
               

               
Conread position:
               
3-508
               

               
Cow position:
               
chr17:11374956-11374436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
141, 107
               

               
Conread position:
               
3-508
               

               
Cow position:
               
chr17:11397403-11397911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 69
               

               
Conread position:
               
3-511
               

               
Cow position:
               
chr17:14050459-14049963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 62
               

               
Conread position:
               
3-511
               

               
Cow position:
               
chr17:24973683-24974190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 144
               

               
Conread position:
               
3-512
               

               
Cow position:
               
chr17:20233960-20234446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 126
               

               
Conread position:
               
3-512
               

               
Cow position:
               
chr17:25815341-25815844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 147
               

               
Conread position:
               
3-515
               

               
Cow position:
               
chr17:21293312-21292787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 144
               

               
Conread position:
               
3-522
               

               
Cow position:
               
chr17:17179773-17180303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 65
               

               
Conread position:
               
3-522
               

               
Cow position:
               
chr17:18720711-18720196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
3-524
               

               
Cow position:
               
chr17:25875142-25875656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 14
               

               
Conread position:
               
3-525
               

               
Cow position:
               
chr17:11618313-11618849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 338
               

               
Conread position:
               
3-525
               

               
Cow position:
               
chr17:24077139-24077647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 43
               

               
Conread position:
               
3-525
               

               
Cow position:
               
chr17:25189016-25189548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 33
               

               
Conread position:
               
3-525
               

               
Cow position:
               
chr17:27795381-27795918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 112
               

               
Conread position:
               
3-525
               

               
Cow position:
               
chr17:42419472-42419963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 43
               

               
Conread position:
               
3-526
               

               
Cow position:
               
chr17:33288921-33288400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 180
               

               
Conread position:
               
3-528
               

               
Cow position:
               
chr17:15664402-15664941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 419
               

               
Conread position:
               
3-528
               

               
Cow position:
               
chr17:18860985-18860481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
3-532
               

               
Cow position:
               
chr17:14003562-14004092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 113
               

               
Conread position:
               
3-533
               

               
Cow position:
               
chr17:30529803-30529280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 115
               

               
Conread position:
               
3-535
               

               
Cow position:
               
chr17:5280909-5280382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 99
               

               
Conread position:
               
3-537
               

               
Cow position:
               
chr17:32027729-32027172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 301
               

               
Conread position:
               
4-177
               

               
Cow position:
               
chr17:22057439-22057262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
4-308
               

               
Cow position:
               
chr17:21313081-21312762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
52, 150
               

               
Conread position:
               
4-354
               

               
Cow position:
               
chr17:2034284-2034622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
4-403
               

               
Cow position:
               
chr17:3503312-3503723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
52, 148
               

               
Conread position:
               
4-430
               

               
Cow position:
               
chr17:8079051-8079481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 98
               

               
Conread position:
               
4-445
               

               
Cow position:
               
chr17:21335964-21335508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 139
               

               
Conread position:
               
4-500
               

               
Cow position:
               
chr17:1783872-1783390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 85
               

               
Conread position:
               
4-502
               

               
Cow position:
               
chr17:39412764-39412266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 10
               

               
Conread position:
               
4-504
               

               
Cow position:
               
chr17:33934012-33933508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 150
               

               
Conread position:
               
4-513
               

               
Cow position:
               
chr17:11839435-11839972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 67
               

               
Conread position:
               
5-302
               

               
Cow position:
               
chr17:42347486-42347183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
77, 164
               

               
Conread position:
               
5-412
               

               
Cow position:
               
chr17:9565044-9565451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 275
               

               
Conread position:
               
5-484
               

               
Cow position:
               
chr17:2810350-2810855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 147
               

               
Conread position:
               
5-493
               

               
Cow position:
               
chr17:10529006-10528501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 97
               

               
Conread position:
               
5-503
               

               
Cow position:
               
chr17:22563931-22564417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
134, 31
               

               
Conread position:
               
5-504
               

               
Cow position:
               
chr17:20093389-20092889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 76
               

               
Conread position:
               
5-523
               

               
Cow position:
               
chr17:20848269-20848787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 31
               

               
Conread position:
               
5-529
               

               
Cow position:
               
chr17:17222079-17222608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 70
               

               
Conread position:
               
5-536
               

               
Cow position:
               
chr17:23063449-23063993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 31
               

               
Conread position:
               
6-500
               

               
Cow position:
               
chr17:11296374-11296875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 27
               

               
Conread position:
               
7-308
               

               
Cow position:
               
chr17:3387034-3387320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
74, 29
               

               
Conread position:
               
7-315
               

               
Cow position:
               
chr17:11056642-11056315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
47, 302
               

               
Conread position:
               
7-335
               

               
Cow position:
               
chr17:26182959-26183302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
74, 139
               

               
Conread position:
               
7-504
               

               
Cow position:
               
chr17:24883828-24883330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 94
               

               
Conread position:
               
7-514
               

               
Cow position:
               
chr17:26230676-26231215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
8-419
               

               
Cow position:
               
chr17:39857154-39857543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
197, 73
               

               
Conread position:
               
8-507
               

               
Cow position:
               
chr17:20033176-20032665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 15
               

               
Conread position:
               
10-504
               

               
Cow position:
               
chr17:20090878-20090389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
11-301
               

               
Cow position:
               
chr17:5896171-5895870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 272
               

               
Conread position:
               
11-494
               

               
Cow position:
               
chr17:28285282-28284806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
122, 25
               

               
Conread position:
               
11-522
               

               
Cow position:
               
chr17:21115204-21114695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 25
               

               
Conread position:
               
12-269
               

               
Cow position:
               
chr17:10634314-10634051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
132, 177
               

               
Conread position:
               
12-347
               

               
Cow position:
               
chr17:12059354-12059007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
29, 64
               

               
Conread position:
               
12-514
               

               
Cow position:
               
chr17:31481297-31480781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
133, 24
               

               
Conread position:
               
13-529
               

               
Cow position:
               
chr17:21959936-21959417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 95
               

               
Conread position:
               
14-331
               

               
Cow position:
               
chr17:21323042-21323346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
23, 63
               

               
Conread position:
               
14-517
               

               
Cow position:
               
chr17:6566220-6566736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 22
               

               
Conread position:
               
17-425
               

               
Cow position:
               
chr17:5900135-5900533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
130, 24
               

               
Conread position:
               
17-434
               

               
Cow position:
               
chr17:32366033-32366466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
64, 53
               

               
Conread position:
               
17-508
               

               
Cow position:
               
chr17:44147225-44146729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
127, 75
               

               
Conread position:
               
17-514
               

               
Cow position:
               
chr17:17059187-17059667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 128
               

               
Conread position:
               
17-522
               

               
Cow position:
               
chr17:40771575-40772090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 186
               

               
Conread position:
               
18-504
               

               
Cow position:
               
chr17:5898773-5898284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 18
               

               
Conread position:
               
18-525
               

               
Cow position:
               
chr17:13940574-13940059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 84
               

               
Conread position:
               
20-315
               

               
Cow position:
               
chr17:21031538-21031841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
180, 61
               

               
Conread position:
               
22-419
               

               
Cow position:
               
chr17:21244041-21243632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 178
               

               
Conread position:
               
22-498
               

               
Cow position:
               
chr17:5000822-5000367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
129, 58
               

               
Conread position:
               
23-378
               

               
Cow position:
               
chr17:28539788-28540145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 106
               

               
Conread position:
               
24-514
               

               
Cow position:
               
chr17:16371004-16371513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 259
               

               
Conread position:
               
25-500
               

               
Cow position:
               
chr17:11102039-11101582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 121
               

               
Conread position:
               
27-490
               

               
Cow position:
               
chr17:29080323-29080763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 67
               

               
Conread position:
               
28-340
               

               
Cow position:
               
chr17:20839799-20839487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
123, 9
               

               
Conread position:
               
28-504
               

               
Cow position:
               
chr17:20780268-20780765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 54
               

               
Conread position:
               
29-504
               

               
Cow position:
               
chr17:21004072-21003591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 281
               

               
Conread position:
               
30-432
               

               
Cow position:
               
chr17:22806773-22806372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
126, 17
               

               
Conread position:
               
30-496
               

               
Cow position:
               
chr17:7132700-7132192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
32-512
               

               
Cow position:
               
chr17:11664826-11664327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 49
               

               
Conread position:
               
33-444
               

               
Cow position:
               
chr17:24580537-24580113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
23, 165
               

               
Conread position:
               
34-504
               

               
Cow position:
               
chr17:17410061-17410540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
34-508
               

               
Cow position:
               
chr17:15300106-15299635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
47, 110
               

               
Conread position:
               
35-514
               

               
Cow position:
               
chr17:7697820-7698305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
9, 57
               

               
Conread position:
               
37-402
               

               
Cow position:
               
chr17:14848755-14848405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
39, 12
               

               
Conread position:
               
37-504
               

               
Cow position:
               
chr17:32419352-32418877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 221
               

               
Conread position:
               
38-425
               

               
Cow position:
               
chr17:27047931-27048319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 64
               

               
Conread position:
               
38-466
               

               
Cow position:
               
chr17:30665042-30665474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 27
               

               
Conread position:
               
40-269
               

               
Cow position:
               
chr17:22781462-22781701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
104, 41
               

               
Conread position:
               
43-186
               

               
Cow position:
               
chr17:15376096-15376244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
34, 101
               

               
Conread position:
               
43-425
               

               
Cow position:
               
chr17:9746294-9746676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
61, 38
               

               
Conread position:
               
43-490
               

               
Cow position:
               
chr17:5423298-5422852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 66
               

               
Conread position:
               
43-504
               

               
Cow position:
               
chr17:7810964-7810506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 11
               

               
Conread position:
               
43-522
               

               
Cow position:
               
chr17:15103115-15102632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 155
               

               
Conread position:
               
43-525
               

               
Cow position:
               
chr17:15684278-15684765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
41, 104
               

               
Conread position:
               
44-269
               

               
Cow position:
               
chr17:5745469-5745244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
39, 100
               

               
Conread position:
               
44-333
               

               
Cow position:
               
chr17:9778025-9778315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
37, 105
               

               
Conread position:
               
44-425
               

               
Cow position:
               
chr17:12220164-12219775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
36, 161
               

               
Conread position:
               
44-504
               

               
Cow position:
               
chr17:24587392-24587863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 154
               

               
Conread position:
               
44-504
               

               
Cow position:
               
chr17:34948414-34948877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 103
               

               
Conread position:
               
44-508
               

               
Cow position:
               
chr17:32554249-32553806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
100, 37
               

               
Conread position:
               
44-520
               

               
Cow position:
               
chr17:24787247-24786768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 154
               

               
Conread position:
               
44-527
               

               
Cow position:
               
chr17:36790922-36791387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
173, 37
               

               
Conread position:
               
45-284
               

               
Cow position:
               
chr17:25141241-25141471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
46-253
               

               
Cow position:
               
chr17:30999552-30999760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
35, 49
               

               
Conread position:
               
46-269
               

               
Cow position:
               
chr17:15132942-15133158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
159, 35
               

               
Conread position:
               
46-433
               

               
Cow position:
               
chr17:21755665-21755260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 246
               

               
Conread position:
               
47-221
               

               
Cow position:
               
chr17:25078216-25078047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
158, 34
               

               
Conread position:
               
47-355
               

               
Cow position:
               
chr17:41290240-41289928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 93
               

               
Conread position:
               
47-438
               

               
Cow position:
               
chr17:15340952-15340575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
158, 47
               

               
Conread position:
               
47-504
               

               
Cow position:
               
chr17:20157394-20157848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 34
               

               
Conread position:
               
50-339
               

               
Cow position:
               
chr17:5733668-5733390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 92
               

               
Conread position:
               
50-500
               

               
Cow position:
               
chr17:5767694-5768130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 145
               

               
Conread position:
               
51-504
               

               
Cow position:
               
chr17:32472010-32471550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 30
               

               
Conread position:
               
52-427
               

               
Cow position:
               
chr17:17405920-17406301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
24, 92
               

               
Conread position:
               
52-493
               

               
Cow position:
               
chr17:33052645-33053083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
30, 94
               

               
Conread position:
               
53-234
               

               
Cow position:
               
chr17:3182801-3182618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 137
               

               
Conread position:
               
53-269
               

               
Cow position:
               
chr17:4473020-4472808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
99, 41
               

               
Conread position:
               
53-344
               

               
Cow position:
               
chr17:20870310-20870015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
98, 28
               

               
Conread position:
               
53-504
               

               
Cow position:
               
chr17:11281324-11280851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
53-504
               

               
Cow position:
               
chr17:25128566-25128114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 58
               

               
Conread position:
               
53-511
               

               
Cow position:
               
chr17:21739101-21738618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 431
               

               
Conread position:
               
53-518
               

               
Cow position:
               
chr17:30713136-30713600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
54-466
               

               
Cow position:
               
chr17:25097247-25097655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 141
               

               
Conread position:
               
54-492
               

               
Cow position:
               
chr17:7436950-7437399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 65
               

               
Conread position:
               
54-525
               

               
Cow position:
               
chr17:12325962-12325509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
55-432
               

               
Cow position:
               
chr17:23245997-23246369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
58-500
               

               
Cow position:
               
chr17:40741435-40741890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 88
               

               
Conread position:
               
61-316
               

               
Cow position:
               
chr17:27765072-27765328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 83
               

               
Conread position:
               
61-392
               

               
Cow position:
               
chr17:38646859-38647192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 23
               

               
Conread position:
               
61-501
               

               
Cow position:
               
chr17:10446707-10447150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
17, 212
               

               
Conread position:
               
61-503
               

               
Cow position:
               
chr17:32279116-32278665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 85
               

               
Conread position:
               
61-508
               

               
Cow position:
               
chr17:5250765-5250315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
137, 17
               

               
Conread position:
               
61-528
               

               
Cow position:
               
chr17:20932127-20932594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 34
               

               
Conread position:
               
63-339
               

               
Cow position:
               
chr17:6624051-6624334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
18, 217
               

               
Conread position:
               
64-308
               

               
Cow position:
               
chr17:20912692-20912935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
115, 81
               

               
Conread position:
               
64-393
               

               
Cow position:
               
chr17:31231320-31230991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 66
               

               
Conread position:
               
64-500
               

               
Cow position:
               
chr17:27429372-27429792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
16, 130
               

               
Conread position:
               
64-512
               

               
Cow position:
               
chr17:1035810-1035346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 105
               

               
Conread position:
               
67-415
               

               
Cow position:
               
chr17:25032675-25032328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
12, 128
               

               
Conread position:
               
67-423
               

               
Cow position:
               
chr17:34864367-34864730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 199
               

               
Conread position:
               
68-518
               

               
Cow position:
               
chr17:25611892-25612342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
90, 79
               

               
Conread position:
               
69-328
               

               
Cow position:
               
chr17:26224317-26224575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
75, 149
               

               
Conread position:
               
73-292
               

               
Cow position:
               
chr17:21697536-21697770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
71, 208
               

               
Conread position:
               
73-431
               

               
Cow position:
               
chr17:9911566-9911927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 119
               

               
Conread position:
               
74-335
               

               
Cow position:
               
chr17:44232915-44232638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
74-530
               

               
Cow position:
               
chr17:1256699-1256234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 176
               

               
Conread position:
               
75-265
               

               
Cow position:
               
chr17:18929269-18929094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
75-308
               

               
Cow position:
               
chr17:35311227-35311474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
69, 209
               

               
Conread position:
               
75-433
               

               
Cow position:
               
chr17:37482273-37481900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
71, 214
               

               
Conread position:
               
75-494
               

               
Cow position:
               
chr17:5514565-5514987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
69, 33
               

               
Conread position:
               
75-526
               

               
Cow position:
               
chr17:25999922-26000381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 70
               

               
Conread position:
               
76-507
               

               
Cow position:
               
chr17:12108611-12109051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 15
               

               
Conread position:
               
78-490
               

               
Cow position:
               
chr17:24773492-24773902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
66, 116
               

               
Conread position:
               
79-495
               

               
Cow position:
               
chr17:12536658-12536243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 120
               

               
Conread position:
               
81-504
               

               
Cow position:
               
chr17:908558-908979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 108
               

               
Conread position:
               
81-512
               

               
Cow position:
               
chr17:3202589-3202163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
47, 156
               

               
Conread position:
               
85-498
               

               
Cow position:
               
chr17:1063005-1063403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 60
               

               
Conread position:
               
94-508
               

               
Cow position:
               
chr17:10459111-10458690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 98
               

               
Conread position:
               
103-443
               

               
Cow position:
               
chr17:38363140-38362811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
104, 42
               

               
Conread position:
               
103-516
               

               
Cow position:
               
chr17:1634648-1634243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 11
               

               
Conread position:
               
103-529
               

               
Cow position:
               
chr17:17683064-17682647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
49, 42
               

               
Conread position:
               
105-515
               

               
Cow position:
               
chr17:4106150-4105742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 40
               

               
Conread position:
               
105-515
               

               
Cow position:
               
chr17:4121886-4121477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 40
               

               
Conread position:
               
105-529
               

               
Cow position:
               
chr17:12306560-12306137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 102
               

               
Conread position:
               
107-525
               

               
Cow position:
               
chr17:18146021-18146452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 5
               

               
Conread position:
               
109-529
               

               
Cow position:
               
chr17:28467976-28468394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 84
               

               
Conread position:
               
110-504
               

               
Cow position:
               
chr17:7142705-7143097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 169
               

               
Conread position:
               
110-529
               

               
Cow position:
               
chr17:27058712-27058285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
34, 74
               

               
Conread position:
               
115-355
               

               
Cow position:
               
chr17:267738-267490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
63, 30
               

               
Conread position:
               
117-500
               

               
Cow position:
               
chr17:31037532-31037141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 76
               

               
Conread position:
               
118-523
               

               
Cow position:
               
chr17:3467618-3468009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 73
               

               
Conread position:
               
127-388
               

               
Cow position:
               
chr17:14762261-14761995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
18, 150
               

               
Conread position:
               
127-504
               

               
Cow position:
               
chr17:11832262-11831878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 121
               

               
Conread position:
               
127-508
               

               
Cow position:
               
chr17:24559157-24559537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 18
               

               
Conread position:
               
134-399
               

               
Cow position:
               
chr17:23798149-23798418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
134-502
               

               
Cow position:
               
chr17:5144302-5143934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
10, 263
               

               
Conread position:
               
145-370
               

               
Cow position:
               
chr17:14060897-14060665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
51, 130
               

               
Conread position:
               
145-504
               

               
Cow position:
               
chr17:27184065-27183702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
17, 80
               

               
Conread position:
               
145-521
               

               
Cow position:
               
chr17:20884402-20884782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 41
               

               
Conread position:
               
149-415
               

               
Cow position:
               
chr17:6848688-6848948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 42
               

               
Conread position:
               
149-430
               

               
Cow position:
               
chr17:7136865-7137156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
54, 74
               

               
Conread position:
               
149-488
               

               
Cow position:
               
chr17:25594820-25594464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
27, 42
               

               
Conread position:
               
149-502
               

               
Cow position:
               
chr17:21437435-21437075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 129
               

               
Conread position:
               
149-503
               

               
Cow position:
               
chr17:32280552-32280907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
56, 17
               

               
Conread position:
               
149-504
               

               
Cow position:
               
chr17:32348957-32349303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
56, 41
               

               
Conread position:
               
149-515
               

               
Cow position:
               
chr17:40673269-40673624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 76
               

               
Conread position:
               
149-516
               

               
Cow position:
               
chr17:4300035-4299689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
55, 11
               

               
Conread position:
               
149-521
               

               
Cow position:
               
chr17:6318974-6318611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
115, 61
               

               
Conread position:
               
149-522
               

               
Cow position:
               
chr17:12946478-12946103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
40, 22
               

               
Conread position:
               
149-528
               

               
Cow position:
               
chr17:9966145-9965757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
55, 135
               

               
Conread position:
               
150-490
               

               
Cow position:
               
chr17:6328996-6329338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 284
               

               
Conread position:
               
150-498
               

               
Cow position:
               
chr17:37699472-37699106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
29, 121
               

               
Conread position:
               
151-403
               

               
Cow position:
               
chr17:25501995-25502252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 39
               

               
Conread position:
               
151-509
               

               
Cow position:
               
chr17:4786609-4786235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
152-451
               

               
Cow position:
               
chr17:35339029-35338727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
152-513
               

               
Cow position:
               
chr17:36179135-36178801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
53, 77
               

               
Conread position:
               
153-521
               

               
Cow position:
               
chr17:11215342-11214978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
42, 182
               

               
Conread position:
               
155-507
               

               
Cow position:
               
chr17:15304098-15303730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
155-529
               

               
Cow position:
               
chr17:34860271-34860640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
49, 109
               

               
Conread position:
               
159-501
               

               
Cow position:
               
chr17:1466538-1466179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
30, 13
               

               
Conread position:
               
162-439
               

               
Cow position:
               
chr17:34751509-34751229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
43, 28
               

               
Conread position:
               
162-504
               

               
Cow position:
               
chr17:9056797-9056459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
6, 45
               

               
Conread position:
               
163-544
               

               
Cow position:
               
chr17:7803277-7802894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 103
               

               
Conread position:
               
164-510
               

               
Cow position:
               
chr17:21325231-21325589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
41, 26
               

               
Conread position:
               
167-500
               

               
Cow position:
               
chr17:11912596-11912269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
167-504
               

               
Cow position:
               
chr17:35573664-35573987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
38, 19
               

               
Conread position:
               
167-525
               

               
Cow position:
               
chr17:14652879-14652520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
38, 23
               

               
Conread position:
               
168-504
               

               
Cow position:
               
chr17:25514221-25513878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
37, 22
               

               
Conread position:
               
171-438
               

               
Cow position:
               
chr17:27203137-27202871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
175-438
               

               
Cow position:
               
chr17:21922713-21922456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
30, 48
               

               
Conread position:
               
175-459
               

               
Cow position:
               
chr17:21489713-21489430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
29, 14
               

               
Conread position:
               
176-504
               

               
Cow position:
               
chr17:25342828-25342500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 13
               

               
Conread position:
               
181-525
               

               
Cow position:
               
chr17:1469291-1469626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
24, 176
               

               
Conread position:
               
182-533
               

               
Cow position:
               
chr17:9824592-9824936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
12, 28
               

               
Conread position:
               
183-503
               

               
Cow position:
               
chr17:11962607-11962295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
6, 20
               

               
Conread position:
               
184-518
               

               
Cow position:
               
chr17:17193411-17193746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
21, 90
               

               
Conread position:
               
188-504
               

               
Cow position:
               
chr17:34791136-34790825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
100, 21
               

               
Conread position:
               
188-540
               

               
Cow position:
               
chr17:7600898-7601241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
17, 52
               

               
Conread position:
               
190-418
               

               
Cow position:
               
chr17:39715082-39715312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
42, 187
               

               
Conread position:
               
190-469
               

               
Cow position:
               
chr17:2275398-2275671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
15, 83
               

               
Conread position:
               
190-524
               

               
Cow position:
               
chr17:29025991-29026332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 89
               

               
Conread position:
               
190-528
               

               
Cow position:
               
chr17:22057099-22056750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
19, 32
               

               
Conread position:
               
191-416
               

               
Cow position:
               
chr17:38263563-38263335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
191-504
               

               
Cow position:
               
chr17:22127851-22128162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 250
               

               
Conread position:
               
192-439
               

               
Cow position:
               
chr17:12880526-12880772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 183
               

               
Conread position:
               
193-504
               

               
Cow position:
               
chr17:21806523-21806209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
12, 84
               

               
Conread position:
               
193-504
               

               
Cow position:
               
chr17:24750852-24751152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
161, 22
               

               
Conread position:
               
196-529
               

               
Cow position:
               
chr17:36864560-36864885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
9, 27
               

               
Conread position:
               
199-490
               

               
Cow position:
               
chr17:26789359-26789641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
71, 108
               

               
Conread position:
               
203-504
               

               
Cow position:
               
chr17:31559518-31559811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
204-522
               

               
Cow position:
               
chr17:18811110-18810801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
211-509
               

               
Cow position:
               
chr17:24120143-24119846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
14, 68
               

               
Conread position:
               
212-466
               

               
Cow position:
               
chr17:27304004-27303769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
213-515
               

               
Cow position:
               
chr17:35051561-35051870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
139, 11
               

               
Conread position:
               
214-488
               

               
Cow position:
               
chr17:10432021-10431740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
138, 10
               

               
Conread position:
               
215-431
               

               
Cow position:
               
chr17:22017131-22016919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
52, 9
               

               
Conread position:
               
215-441
               

               
Cow position:
               
chr17:6583105-6582875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 57
               

               
Conread position:
               
215-442
               

               
Cow position:
               
chr17:23516986-23516762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
215-510
               

               
Cow position:
               
chr17:39606386-39606668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
53, 9
               

               
Conread position:
               
215-520
               

               
Cow position:
               
chr17:22051636-22051336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
84, 9
               

               
Conread position:
               
215-525
               

               
Cow position:
               
chr17:33155199-33154896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
286, 11
               

               
Conread position:
               
217-413
               

               
Cow position:
               
chr17:16158449-16158643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
217-500
               

               
Cow position:
               
chr17:26448500-26448779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
30, 52
               

               
Conread position:
               
217-511
               

               
Cow position:
               
chr17:18267213-18267508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
48, 11
               

               
Conread position:
               
218-498
               

               
Cow position:
               
chr17:30749990-30750283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 48
               

               
Conread position:
               
218-512
               

               
Cow position:
               
chr17:25126310-25126592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
218-529
               

               
Cow position:
               
chr17:21039520-21039818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
224-522
               

               
Cow position:
               
chr17:18818532-18818824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
49, 36
               

               
Conread position:
               
224-540
               

               
Cow position:
               
chr17:26757498-26757164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
226-415
               

               
Cow position:
               
chr17:28814533-28814339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
226-465
               

               
Cow position:
               
chr17:9940649-9940904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
226-504
               

               
Cow position:
               
chr17:40638916-40639187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 35
               

               
Conread position:
               
226-521
               

               
Cow position:
               
chr17:36814326-36814624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 70
               

               
Conread position:
               
226-542
               

               
Cow position:
               
chr17:9770477-9770782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
307, 94
               

               
Conread position:
               
227-498
               

               
Cow position:
               
chr17:5372562-5372298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
40, 55
               

               
Conread position:
               
227-514
               

               
Cow position:
               
chr17:23280890-23280608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
35, 45
               

               
Conread position:
               
227-523
               

               
Cow position:
               
chr17:32333125-32332836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 51
               

               
Conread position:
               
227-525
               

               
Cow position:
               
chr17:35149561-35149270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
228-514
               

               
Cow position:
               
chr17:7571067-7571358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
230-509
               

               
Cow position:
               
chr17:28982149-28982422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
49, 127
               

               
Conread position:
               
230-525
               

               
Cow position:
               
chr17:5011819-5012106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
100, 38
               

               
Conread position:
               
231-505
               

               
Cow position:
               
chr17:17044362-17044093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
42, 51
               

               
Conread position:
               
232-490
               

               
Cow position:
               
chr17:949946-950201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
163, 94
               

               
Conread position:
               
237-504
               

               
Cow position:
               
chr17:4723611-4723339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
46, 161
               

               
Conread position:
               
237-504
               

               
Cow position:
               
chr17:18934234-18934496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
27, 113
               

               
Conread position:
               
237-512
               

               
Cow position:
               
chr17:29995461-29995188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
41, 181
               

               
Conread position:
               
237-522
               

               
Cow position:
               
chr17:18767016-18766735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
92, 29
               

               
Conread position:
               
237-522
               

               
Cow position:
               
chr17:25584216-25584502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 97
               

               
Conread position:
               
237-529
               

               
Cow position:
               
chr17:12959082-12959365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
48, 24
               

               
Conread position:
               
238-498
               

               
Cow position:
               
chr17:17772448-17772184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
20, 34
               

               
Conread position:
               
239-504
               

               
Cow position:
               
chr17:25473301-25473041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
240-500
               

               
Cow position:
               
chr17:33164837-33164584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
32, 75
               

               
Conread position:
               
241-504
               

               
Cow position:
               
chr17:22189419-22189671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
242-418
               

               
Cow position:
               
chr17:18848179-18848004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
242-424
               

               
Cow position:
               
chr17:34836152-34836334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
243-459
               

               
Cow position:
               
chr17:25718089-25718305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
247-502
               

               
Cow position:
               
chr17:8815177-8815425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
25, 14
               

               
Conread position:
               
247-504
               

               
Cow position:
               
chr17:3388811-3389074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
31, 95
               

               
Conread position:
               
247-528
               

               
Cow position:
               
chr17:8948979-8948702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 69
               

               
Conread position:
               
248-504
               

               
Cow position:
               
chr17:3153584-3153328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
148, 17
               

               
Conread position:
               
248-504
               

               
Cow position:
               
chr17:37341053-37340791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
20, 172
               

               
Conread position:
               
250-525
               

               
Cow position:
               
chr17:5013087-5012811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
25, 40
               

               
Conread position:
               
250-540
               

               
Cow position:
               
chr17:16868279-16868001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
279, 118
               

               
Conread position:
               
254-525
               

               
Cow position:
               
chr17:9510003-9509730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
11, 57
               

               
Conread position:
               
255-533
               

               
Cow position:
               
chr17:6269742-6270040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
256-512
               

               
Cow position:
               
chr17:21466268-21466010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
258-449
               

               
Cow position:
               
chr17:25930541-25930352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
258-529
               

               
Cow position:
               
chr17:7959176-7959447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
5, 119
               

               
Conread position:
               
260-504
               

               
Cow position:
               
chr17:21863656-21863899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
149, 10
               

               
Conread position:
               
260-504
               

               
Cow position:
               
chr17:43315289-43315050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 67
               

               
Conread position:
               
261-527
               

               
Cow position:
               
chr17:21014982-21015249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
262-507
               

               
Cow position:
               
chr17:15354934-15355177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
268-499
               

               
Cow position:
               
chr17:27440183-27440412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
129, 67
               

               
Conread position:
               
268-512
               

               
Cow position:
               
chr17:40276747-40276983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
268-515
               

               
Cow position:
               
chr17:1025818-1025584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
89, 61
               

               
Conread position:
               
271-522
               

               
Cow position:
               
chr17:20905090-20904848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
7, 114
               

               
Conread position:
               
272-448
               

               
Cow position:
               
chr17:31512395-31512566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
272-483
               

               
Cow position:
               
chr17:24168618-24168827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
272-490
               

               
Cow position:
               
chr17:8986595-8986375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
272-504
               

               
Cow position:
               
chr17:24841706-24841937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
20, 24
               

               
Conread position:
               
272-504
               

               
Cow position:
               
chr17:40355269-40355501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
273-438
               

               
Cow position:
               
chr17:11306221-11306385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
273-523
               

               
Cow position:
               
chr17:17034961-17035204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
274-492
               

               
Cow position:
               
chr17:24862471-24862683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
274-523
               

               
Cow position:
               
chr17:26072748-26072499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
229, 220
               

               
Conread position:
               
275-520
               

               
Cow position:
               
chr17:4817542-4817788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
17, 21
               

               
Conread position:
               
277-516
               

               
Cow position:
               
chr17:42150407-42150643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
225, 151
               

               
Conread position:
               
289-485
               

               
Cow position:
               
chr17:42361532-42361730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
289-517
               

               
Cow position:
               
chr17:32143115-32143342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
295-438
               

               
Cow position:
               
chr17:25193493-25193350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
295-465
               

               
Cow position:
               
chr17:3291106-3291270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
295-498
               

               
Cow position:
               
chr17:10414532-10414727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
295-500
               

               
Cow position:
               
chr17:946391-946592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
295-502
               

               
Cow position:
               
chr17:43957694-43957899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
295-504
               

               
Cow position:
               
chr17:27292423-27292214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
295-514
               

               
Cow position:
               
chr17:1463297-1463079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
211, 0
               

               
Conread position:
               
295-526
               

               
Cow position:
               
chr17:13414334-13414103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
297-466
               

               
Cow position:
               
chr17:31990969-31991141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
128, 84
               

               
Conread position:
               
297-532
               

               
Cow position:
               
chr17:20929277-20929511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
222, 0
               

               
Conread position:
               
298-525
               

               
Cow position:
               
chr17:21718960-21718733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
206, 121
               

               
Conread position:
               
305-500
               

               
Cow position:
               
chr17:5344661-5344855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 172
               

               
Conread position:
               
305-507
               

               
Cow position:
               
chr17:39963921-39964121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
305-508
               

               
Cow position:
               
chr17:32220842-32220638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
68, 102
               

               
Conread position:
               
305-514
               

               
Cow position:
               
chr17:26225071-26225278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
305-545
               

               
Cow position:
               
chr17:15883715-15883956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
308-479
               

               
Cow position:
               
chr17:25348415-25348583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
162, 119
               

               
Conread position:
               
308-495
               

               
Cow position:
               
chr17:5027413-5027233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
308-504
               

               
Cow position:
               
chr17:10016326-10016517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
311-437
               

               
Cow position:
               
chr17:21031877-21032001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
122, 108
               

               
Conread position:
               
312-431
               

               
Cow position:
               
chr17:42346968-42346849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
312-498
               

               
Cow position:
               
chr17:6318052-6317873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 115
               

               
Conread position:
               
312-500
               

               
Cow position:
               
chr17:20306377-20306569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
111, 42
               

               
Conread position:
               
312-512
               

               
Cow position:
               
chr17:27647075-27646877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
83, 103
               

               
Conread position:
               
312-524
               

               
Cow position:
               
chr17:10222159-10221949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
204, 0
               

               
Conread position:
               
312-530
               

               
Cow position:
               
chr17:6786987-6787206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
312-538
               

               
Cow position:
               
chr17:28795932-28795703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
194, 0
               

               
Conread position:
               
313-490
               

               
Cow position:
               
chr17:44234302-44234471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
313-503
               

               
Cow position:
               
chr17:9078169-9077974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
313-504
               

               
Cow position:
               
chr17:11056108-11055927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
313-509
               

               
Cow position:
               
chr17:21676942-21677136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
313-512
               

               
Cow position:
               
chr17:19898942-19899149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
314-500
               

               
Cow position:
               
chr17:7711490-7711672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
314-508
               

               
Cow position:
               
chr17:22081463-22081279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
163, 60
               

               
Conread position:
               
314-514
               

               
Cow position:
               
chr17:5762102-5761899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
38, 21
               

               
Conread position:
               
314-515
               

               
Cow position:
               
chr17:11921112-11920913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
192, 0
               

               
Conread position:
               
314-515
               

               
Cow position:
               
chr17:19471718-19471521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
189, 105
               

               
Conread position:
               
314-525
               

               
Cow position:
               
chr17:7733065-7732853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
108, 167
               

               
Conread position:
               
315-490
               

               
Cow position:
               
chr17:24767234-24767062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
316-508
               

               
Cow position:
               
chr17:5857519-5857324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
59, 99
               

               
Conread position:
               
317-490
               

               
Cow position:
               
chr17:8137461-8137628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
317-500
               

               
Cow position:
               
chr17:12215200-12215017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
90, 20
               

               
Conread position:
               
317-505
               

               
Cow position:
               
chr17:20836148-20836331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
318-525
               

               
Cow position:
               
chr17:21075830-21076034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
36, 89
               

               
Conread position:
               
320-451
               

               
Cow position:
               
chr17:4685618-4685750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
320-490
               

               
Cow position:
               
chr17:21777785-21777954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
320-504
               

               
Cow position:
               
chr17:30513946-30513771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
320-504
               

               
Cow position:
               
chr17:43323486-43323302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
320-513
               

               
Cow position:
               
chr17:21181510-21181703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
320-524
               

               
Cow position:
               
chr17:32962607-32962403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
321-518
               

               
Cow position:
               
chr17:26183404-26183602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
180, 0
               

               
Conread position:
               
326-502
               

               
Cow position:
               
chr17:24987271-24987440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 30
               

               
Conread position:
               
326-515
               

               
Cow position:
               
chr17:31563623-31563435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
93, 22
               

               
Conread position:
               
327-489
               

               
Cow position:
               
chr17:31754709-31754547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
107, 21
               

               
Conread position:
               
327-502
               

               
Cow position:
               
chr17:34768391-34768215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
327-504
               

               
Cow position:
               
chr17:3364657-3364829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
41, 18
               

               
Conread position:
               
327-504
               

               
Cow position:
               
chr17:20913176-20913348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
327-504
               

               
Cow position:
               
chr17:35457750-35457578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
327-509
               

               
Cow position:
               
chr17:9899969-9900148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
327-512
               

               
Cow position:
               
chr17:7037558-7037370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
327-524
               

               
Cow position:
               
chr17:6761782-6761593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
182, 68
               

               
Conread position:
               
327-525
               

               
Cow position:
               
chr17:16438655-16438459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
115, 163
               

               
Conread position:
               
327-525
               

               
Cow position:
               
chr17:21236588-21236785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
188, 0
               

               
Conread position:
               
327-527
               

               
Cow position:
               
chr17:19544167-19543970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
5, 52
               

               
Conread position:
               
328-508
               

               
Cow position:
               
chr17:12963540-12963370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
328-512
               

               
Cow position:
               
chr17:25467049-25467240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
328-533
               

               
Cow position:
               
chr17:2729846-2729652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
329-467
               

               
Cow position:
               
chr17:8660264-8660400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
329-504
               

               
Cow position:
               
chr17:11432579-11432754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
329-508
               

               
Cow position:
               
chr17:37973999-37973814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
331-503
               

               
Cow position:
               
chr17:10825550-10825715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
331-507
               

               
Cow position:
               
chr17:5038981-5038812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
331-512
               

               
Cow position:
               
chr17:25122174-25122000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
331-522
               

               
Cow position:
               
chr17:18708541-18708359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
331-525
               

               
Cow position:
               
chr17:3387787-3387981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
172, 73
               

               
Conread position:
               
332-487
               

               
Cow position:
               
chr17:25095552-25095709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
332-490
               

               
Cow position:
               
chr17:28528924-28529081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
332-508
               

               
Cow position:
               
chr17:32978862-32978693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
332-525
               

               
Cow position:
               
chr17:8663575-8663765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
105, 53
               

               
Conread position:
               
333-504
               

               
Cow position:
               
chr17:13297452-13297625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
87, 64
               

               
Conread position:
               
333-512
               

               
Cow position:
               
chr17:36943441-36943611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
337-500
               

               
Cow position:
               
chr17:24111526-24111367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
337-504
               

               
Cow position:
               
chr17:5048006-5048170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
337-525
               

               
Cow position:
               
chr17:6767185-6766996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
338-504
               

               
Cow position:
               
chr17:15103663-15103502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
338-508
               

               
Cow position:
               
chr17:9260535-9260367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
338-511
               

               
Cow position:
               
chr17:11269698-11269527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
338-513
               

               
Cow position:
               
chr17:25702679-25702854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
164, 8
               

               
Conread position:
               
338-514
               

               
Cow position:
               
chr17:30108516-30108680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
338-523
               

               
Cow position:
               
chr17:41009349-41009533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
168, 112
               

               
Conread position:
               
338-525
               

               
Cow position:
               
chr17:17782132-17782313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
343-514
               

               
Cow position:
               
chr17:27258504-27258677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 41
               

               
Conread position:
               
343-516
               

               
Cow position:
               
chr17:20359194-20359366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
71, 149
               

               
Conread position:
               
345-510
               

               
Cow position:
               
chr17:10630899-10630736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
345-530
               

               
Cow position:
               
chr17:35921973-35922161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
346-489
               

               
Cow position:
               
chr17:34806582-34806438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
346-504
               

               
Cow position:
               
chr17:27606602-27606753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
347-514
               

               
Cow position:
               
chr17:7864910-7865074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
347-521
               

               
Cow position:
               
chr17:14668588-14668763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
348-519
               

               
Cow position:
               
chr17:17822177-17822346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
147, 40
               

               
Conread position:
               
348-525
               

               
Cow position:
               
chr17:31736419-31736242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
79, 159
               

               
Conread position:
               
348-540
               

               
Cow position:
               
chr17:24030145-24029965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
173, 73
               

               
Conread position:
               
350-503
               

               
Cow position:
               
chr17:3541798-3541947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
353-523
               

               
Cow position:
               
chr17:10037499-10037672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
353-525
               

               
Cow position:
               
chr17:22241096-22241274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
67, 51
               

               
Conread position:
               
353-525
               

               
Cow position:
               
chr17:31985849-31985687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
153, 68
               

               
Conread position:
               
353-529
               

               
Cow position:
               
chr17:15334404-15334227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
356-490
               

               
Cow position:
               
chr17:21910437-21910305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
356-504
               

               
Cow position:
               
chr17:8809410-8809268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
356-515
               

               
Cow position:
               
chr17:18673945-18673786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
358-504
               

               
Cow position:
               
chr17:24612747-24612885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
358-522
               

               
Cow position:
               
chr17:24116706-24116871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
75, 150
               

               
Conread position:
               
359-493
               

               
Cow position:
               
chr17:22773029-22772893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
359-512
               

               
Cow position:
               
chr17:20783096-20782949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
360-508
               

               
Cow position:
               
chr17:30156322-30156176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
360-521
               

               
Cow position:
               
chr17:952250-952410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
360-525
               

               
Cow position:
               
chr17:7659505-7659338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
62, 120
               

               
Conread position:
               
361-515
               

               
Cow position:
               
chr17:35935259-35935411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
362-504
               

               
Cow position:
               
chr17:22223816-22223954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
366-512
               

               
Cow position:
               
chr17:12249131-12248985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
375-490
               

               
Cow position:
               
chr17:20887133-20887248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
378-513
               

               
Cow position:
               
chr17:4271246-4271110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
378-539
               

               
Cow position:
               
chr17:39904590-39904750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
380-500
               

               
Cow position:
               
chr17:24826967-24826847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
384-504
               

               
Cow position:
               
chr17:3517595-3517476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               
Show alignments to all cow chromosomes.