Cow genome map

Conread name: Pig1-44A05

Conread position: 2-348
Cow position: chrX:6234717-6234376 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 245
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 201, 59

Conread position: 2-427
Cow position: chrX:29289294-29289730 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 100

Conread position: 3-142
Cow position: chrX:616684-616547 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 78, 33

Conread position: 3-170
Cow position: chrX:18223132-18223301 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 148, 140

Conread position: 3-177
Cow position: chrX:32871067-32870886 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 78, 105

Conread position: 3-195
Cow position: chrX:7382042-7382240 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 73, 0

Conread position: 3-203
Cow position: chrX:10916473-10916671 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 78, 128

Conread position: 3-203
Cow position: chrX:21795215-21795418 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 142, 0

Conread position: 3-204
Cow position: chrX:33205273-33205071 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 78, 141

Conread position: 3-222
Cow position: chrX:2524011-2523783 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 3-232
Cow position: chrX:36250143-36249911 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 79, 99

Conread position: 3-234
Cow position: chrX:4123554-4123790 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 185
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 79, 143

Conread position: 3-235
Cow position: chrX:3161297-3161059 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 92, 228

Conread position: 3-246
Cow position: chrX:42855130-42855379 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 189
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 78, 34

Conread position: 3-265
Cow position: chrX:19188655-19188929 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 163

Conread position: 3-268
Cow position: chrX:35041941-35042219 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 205
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 78, 31

Conread position: 3-269
Cow position: chrX:25237897-25238165 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 141, 58

Conread position: 3-277
Cow position: chrX:21665872-21665594 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 208
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 142, 18

Conread position: 3-278
Cow position: chrX:35609705-35609993 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 3-301
Cow position: chrX:11581654-11581959 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 227
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 76, 8

Conread position: 3-308
Cow position: chrX:38439192-38439514 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 76, 196

Conread position: 3-313
Cow position: chrX:41743632-41743952 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 140

Conread position: 3-315
Cow position: chrX:12115760-12116087 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 239
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 50

Conread position: 3-315
Cow position: chrX:14924719-14925040 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 99

Conread position: 3-315
Cow position: chrX:47379748-47379427 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 211
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 73, 137

Conread position: 3-316
Cow position: chrX:17497815-17498126 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 143

Conread position: 3-316
Cow position: chrX:42462029-42461703 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 228
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 53, 143

Conread position: 3-321
Cow position: chrX:42994333-42994659 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 126

Conread position: 3-324
Cow position: chrX:35681054-35681391 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 241
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 49, 138

Conread position: 3-324
Cow position: chrX:40452494-40452169 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 239
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 73, 191

Conread position: 3-331
Cow position: chrX:42874697-42875039 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 289

Conread position: 3-349
Cow position: chrX:24105345-24105698 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 287

Conread position: 3-360
Cow position: chrX:42507925-42507563 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 258
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 78, 33

Conread position: 3-371
Cow position: chrX:26441061-26440689 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 181

Conread position: 3-409
Cow position: chrX:36778124-36778532 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 280
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 35, 243

Conread position: 3-411
Cow position: chrX:11082894-11082486 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 182

Conread position: 3-412
Cow position: chrX:10412267-10411847 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 86

Conread position: 3-425
Cow position: chrX:30543563-30543135 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 292
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 141, 64

Conread position: 3-431
Cow position: chrX:20697884-20697455 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 34

Conread position: 3-431
Cow position: chrX:35388188-35387770 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 192

Conread position: 3-431
Cow position: chrX:37836308-37836734 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 33

Conread position: 3-431
Cow position: chrX:41192409-41192860 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 304
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 134, 58

Conread position: 3-432
Cow position: chrX:45113355-45113777 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 300
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 78, 33

Conread position: 3-435
Cow position: chrX:878649-878218 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 41

Conread position: 3-435
Cow position: chrX:5872035-5872477 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 33

Conread position: 3-435
Cow position: chrX:8796969-8797409 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 35

Conread position: 3-435
Cow position: chrX:33639684-33640135 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 3-438
Cow position: chrX:27516252-27516683 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 41

Conread position: 3-441
Cow position: chrX:28134068-28134504 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 35

Conread position: 3-459
Cow position: chrX:11718061-11717594 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 78

Conread position: 3-459
Cow position: chrX:38227371-38226926 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 142

Conread position: 3-466
Cow position: chrX:34502642-34503118 (view UCSC Genome Browser custom track)
Alignm length: 485
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 33

Conread position: 3-474
Cow position: chrX:13648065-13647586 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 137

Conread position: 3-484
Cow position: chrX:46771253-46770754 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 217

Conread position: 3-485
Cow position: chrX:31294821-31294360 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 50

Conread position: 3-487
Cow position: chrX:13868416-13868915 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 33

Conread position: 3-488
Cow position: chrX:12309669-12309173 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 31

Conread position: 3-488
Cow position: chrX:18695202-18694710 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 167

Conread position: 3-488
Cow position: chrX:34238440-34238935 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 200

Conread position: 3-490
Cow position: chrX:10831793-10831267 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 218

Conread position: 3-491
Cow position: chrX:35273063-35273587 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 203

Conread position: 3-498
Cow position: chrX:15147465-15146977 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 8

Conread position: 3-500
Cow position: chrX:15007432-15006935 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 98

Conread position: 3-500
Cow position: chrX:22482970-22482465 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 141

Conread position: 3-504
Cow position: chrX:5017687-5017188 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 48

Conread position: 3-504
Cow position: chrX:6413765-6414260 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 126

Conread position: 3-504
Cow position: chrX:7695482-7695991 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 35

Conread position: 3-504
Cow position: chrX:9252455-9251935 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 41

Conread position: 3-504
Cow position: chrX:10866148-10865642 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 98

Conread position: 3-504
Cow position: chrX:14884245-14883729 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 144

Conread position: 3-504
Cow position: chrX:22115563-22115086 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 67

Conread position: 3-504
Cow position: chrX:23122104-23122624 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 326
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 78, 8

Conread position: 3-504
Cow position: chrX:31250110-31250618 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 79

Conread position: 3-504
Cow position: chrX:34376676-34377167 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 106

Conread position: 3-504
Cow position: chrX:37072125-37072614 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 129

Conread position: 3-504
Cow position: chrX:38218437-38218941 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 40

Conread position: 3-504
Cow position: chrX:41122791-41123273 (view UCSC Genome Browser custom track)
Alignm length: 506
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 136

Conread position: 3-504
Cow position: chrX:43114892-43115377 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 52

Conread position: 3-505
Cow position: chrX:31443102-31442610 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 223

Conread position: 3-507
Cow position: chrX:47211131-47210605 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 336
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 89, 145

Conread position: 3-508
Cow position: chrX:28632759-28632250 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 50

Conread position: 3-508
Cow position: chrX:28847157-28846661 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 33

Conread position: 3-510
Cow position: chrX:41790721-41790193 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 68

Conread position: 3-511
Cow position: chrX:20887925-20887414 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 123

Conread position: 3-511
Cow position: chrX:31729177-31729673 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 78

Conread position: 3-512
Cow position: chrX:11844519-11844000 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 33

Conread position: 3-512
Cow position: chrX:16762491-16763005 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 41

Conread position: 3-512
Cow position: chrX:38963831-38964333 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 34

Conread position: 3-513
Cow position: chrX:20340172-20339658 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 135

Conread position: 3-513
Cow position: chrX:27705312-27705824 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 86

Conread position: 3-513
Cow position: chrX:34565019-34565522 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 33

Conread position: 3-513
Cow position: chrX:44192723-44192205 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 31

Conread position: 3-514
Cow position: chrX:25035667-25035143 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 24

Conread position: 3-514
Cow position: chrX:27442833-27442300 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 33

Conread position: 3-514
Cow position: chrX:42247457-42246941 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 33

Conread position: 3-514
Cow position: chrX:46532801-46532250 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 218

Conread position: 3-516
Cow position: chrX:21593005-21593532 (view UCSC Genome Browser custom track)
Alignm length: 540
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 33

Conread position: 3-518
Cow position: chrX:38094806-38094286 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 117

Conread position: 3-521
Cow position: chrX:6543975-6544491 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 191

Conread position: 3-522
Cow position: chrX:5118764-5118252 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 34

Conread position: 3-522
Cow position: chrX:30133605-30133078 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 98

Conread position: 3-522
Cow position: chrX:41238644-41238113 (view UCSC Genome Browser custom track)
Alignm length: 546
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 78

Conread position: 3-522
Cow position: chrX:41526800-41526288 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 338
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 142, 49

Conread position: 3-523
Cow position: chrX:31949212-31948687 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 143

Conread position: 3-523
Cow position: chrX:33855522-33854982 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 205

Conread position: 3-523
Cow position: chrX:40481154-40480602 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 90

Conread position: 3-525
Cow position: chrX:4269348-4268821 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 26

Conread position: 3-525
Cow position: chrX:27446410-27446930 (view UCSC Genome Browser custom track)
Alignm length: 541
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 33

Conread position: 3-527
Cow position: chrX:40827028-40826498 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 123

Conread position: 3-529
Cow position: chrX:1176255-1175736 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 353
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 141, 72

Conread position: 3-529
Cow position: chrX:7178631-7179136 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 33

Conread position: 3-529
Cow position: chrX:15545616-15546133 (view UCSC Genome Browser custom track)
Alignm length: 537
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 78

Conread position: 3-531
Cow position: chrX:34441728-34441199 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 31

Conread position: 3-537
Cow position: chrX:31489231-31489781 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 92

Conread position: 3-538
Cow position: chrX:151620-152170 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 125

Conread position: 3-538
Cow position: chrX:31436199-31436731 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 145

Conread position: 4-268
Cow position: chrX:25232306-25232585 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 187
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 33, 194

Conread position: 4-327
Cow position: chrX:40647698-40648038 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 291

Conread position: 4-401
Cow position: chrX:7571626-7572033 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 188

Conread position: 4-431
Cow position: chrX:7718576-7718988 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 304
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 77, 32

Conread position: 4-488
Cow position: chrX:8730799-8731306 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 357

Conread position: 4-489
Cow position: chrX:1616331-1615845 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 145

Conread position: 4-501
Cow position: chrX:35268610-35269081 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 97

Conread position: 4-504
Cow position: chrX:12249521-12250043 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 356
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 52, 129

Conread position: 4-504
Cow position: chrX:13912799-13913303 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 143

Conread position: 4-507
Cow position: chrX:4633131-4632623 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 16

Conread position: 4-508
Cow position: chrX:34554450-34554956 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 63

Conread position: 4-512
Cow position: chrX:161148-161637 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 91

Conread position: 4-513
Cow position: chrX:41879211-41878700 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 77

Conread position: 4-522
Cow position: chrX:30338198-30337706 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 44

Conread position: 4-525
Cow position: chrX:7351022-7351547 (view UCSC Genome Browser custom track)
Alignm length: 544
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 32

Conread position: 4-527
Cow position: chrX:33466337-33466877 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 68

Conread position: 5-438
Cow position: chrX:34401718-34402168 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 190

Conread position: 5-466
Cow position: chrX:28866268-28865815 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 31

Conread position: 5-467
Cow position: chrX:34532252-34532709 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 67

Conread position: 5-492
Cow position: chrX:47344015-47344515 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 179

Conread position: 5-504
Cow position: chrX:12437515-12437055 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 263, 32

Conread position: 5-504
Cow position: chrX:45430297-45429803 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 142

Conread position: 5-513
Cow position: chrX:12290457-12290955 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 54

Conread position: 6-522
Cow position: chrX:8925428-8925926 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 8

Conread position: 7-410
Cow position: chrX:42171573-42171162 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 29

Conread position: 8-275
Cow position: chrX:48800261-48800534 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 188
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 74, 54

Conread position: 8-513
Cow position: chrX:11655803-11656315 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 195

Conread position: 10-180
Cow position: chrX:5856597-5856423 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 134, 62

Conread position: 11-264
Cow position: chrX:47191668-47191421 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 65, 35

Conread position: 11-411
Cow position: chrX:917643-917232 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 285
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 36, 72

Conread position: 11-419
Cow position: chrX:43527230-43527652 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 273

Conread position: 12-521
Cow position: chrX:7277658-7278148 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 24

Conread position: 13-302
Cow position: chrX:10095755-10096059 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 212
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 71, 133

Conread position: 14-436
Cow position: chrX:17541694-17542122 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 291
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 138, 189

Conread position: 17-276
Cow position: chrX:3653496-3653761 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 190
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 62, 84

Conread position: 17-324
Cow position: chrX:34270149-34270451 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 217
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 188, 19

Conread position: 17-437
Cow position: chrX:17725711-17726138 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 64

Conread position: 17-494
Cow position: chrX:30921918-30922390 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 329
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 65, 85

Conread position: 18-400
Cow position: chrX:488224-488629 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 268
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 126, 0

Conread position: 18-466
Cow position: chrX:45967896-45968336 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 170

Conread position: 19-529
Cow position: chrX:27509286-27508771 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 249

Conread position: 22-177
Cow position: chrX:47247171-47247015 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 124

Conread position: 22-515
Cow position: chrX:13177726-13177245 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 14

Conread position: 23-403
Cow position: chrX:19689957-19690343 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 214

Conread position: 23-503
Cow position: chrX:23497923-23497470 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 10

Conread position: 23-512
Cow position: chrX:37489470-37489966 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 27

Conread position: 24-195
Cow position: chrX:25283404-25283234 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 52, 28

Conread position: 24-286
Cow position: chrX:18293672-18293929 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 181
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 131, 118

Conread position: 24-500
Cow position: chrX:14973992-14973533 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 49

Conread position: 25-493
Cow position: chrX:20151591-20152065 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 121

Conread position: 25-508
Cow position: chrX:45501889-45502367 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 181

Conread position: 27-484
Cow position: chrX:7496988-7497445 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 48

Conread position: 27-504
Cow position: chrX:24366086-24365594 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 34

Conread position: 28-398
Cow position: chrX:48652987-48652599 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 270
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 16, 120

Conread position: 29-384
Cow position: chrX:27680146-27680507 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 54

Conread position: 30-218
Cow position: chrX:48536920-48536724 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 63

Conread position: 30-414
Cow position: chrX:11073445-11073052 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 172

Conread position: 30-489
Cow position: chrX:28878416-28877953 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 115

Conread position: 30-509
Cow position: chrX:41673849-41674332 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 7

Conread position: 30-525
Cow position: chrX:25816150-25815651 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 116

Conread position: 32-265
Cow position: chrX:42339188-42338955 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 49, 117

Conread position: 32-356
Cow position: chrX:678820-678474 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 49, 161

Conread position: 34-362
Cow position: chrX:20709822-20710161 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 221
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 47, 22

Conread position: 35-289
Cow position: chrX:1728667-1728413 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 9, 47

Conread position: 35-431
Cow position: chrX:17888656-17888267 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 94

Conread position: 35-435
Cow position: chrX:9416943-9416524 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 67

Conread position: 35-519
Cow position: chrX:39938766-39938293 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 315
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 109, 37

Conread position: 35-528
Cow position: chrX:27432168-27431673 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 160

Conread position: 36-324
Cow position: chrX:28836151-28835853 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 204
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 9, 18

Conread position: 36-504
Cow position: chrX:40035698-40035214 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 8

Conread position: 38-334
Cow position: chrX:41167210-41166903 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 215
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 106, 0

Conread position: 40-521
Cow position: chrX:20677121-20677611 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 25

Conread position: 43-269
Cow position: chrX:35284376-35284615 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 32, 109

Conread position: 43-277
Cow position: chrX:30833079-30832846 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 171
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 108, 39

Conread position: 43-418
Cow position: chrX:43567698-43568061 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 252
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 99

Conread position: 43-444
Cow position: chrX:17631043-17630632 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 270
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 101, 150

Conread position: 43-476
Cow position: chrX:34663080-34662646 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 24

Conread position: 43-500
Cow position: chrX:9635422-9634968 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 147

Conread position: 44-177
Cow position: chrX:33519377-33519518 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 44-234
Cow position: chrX:2206784-2206598 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 144
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 37, 100

Conread position: 44-254
Cow position: chrX:25411600-25411821 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 37

Conread position: 44-314
Cow position: chrX:23970149-23970418 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 159, 99

Conread position: 44-316
Cow position: chrX:9953901-9954180 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 190
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 32, 181

Conread position: 44-336
Cow position: chrX:9855060-9855358 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 200
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 32, 181

Conread position: 44-396
Cow position: chrX:21004444-21004806 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 248
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 100, 40

Conread position: 44-405
Cow position: chrX:11455292-11454919 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 256
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 135, 44

Conread position: 44-406
Cow position: chrX:1514638-1514288 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 257
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 37, 6

Conread position: 44-414
Cow position: chrX:37119359-37119731 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 254
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 32, 86

Conread position: 44-457
Cow position: chrX:16416268-16416684 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 287
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 32, 48

Conread position: 44-488
Cow position: chrX:6563272-6563732 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 302
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 38, 67

Conread position: 44-493
Cow position: chrX:34543547-34544003 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 74

Conread position: 44-504
Cow position: chrX:27394254-27393790 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 102

Conread position: 44-517
Cow position: chrX:23514258-23513762 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 60

Conread position: 44-521
Cow position: chrX:21672311-21672810 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 58

Conread position: 44-521
Cow position: chrX:44961507-44961997 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 122

Conread position: 44-524
Cow position: chrX:32419970-32420460 (view UCSC Genome Browser custom track)
Alignm length: 504
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 159

Conread position: 44-524
Cow position: chrX:38935041-38935528 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 181

Conread position: 45-524
Cow position: chrX:45598843-45598355 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 328
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 31, 149

Conread position: 46-317
Cow position: chrX:32128218-32127950 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 186
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 110, 170

Conread position: 46-500
Cow position: chrX:17794747-17795203 (view UCSC Genome Browser custom track)
Alignm length: 465
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 143

Conread position: 46-522
Cow position: chrX:42492748-42492274 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 21

Conread position: 47-301
Cow position: chrX:40116188-40116443 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 178
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 99, 34

Conread position: 47-415
Cow position: chrX:17662834-17662458 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 265
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 32, 151

Conread position: 47-435
Cow position: chrX:27772193-27771808 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 270
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 97, 37

Conread position: 47-490
Cow position: chrX:4768513-4768942 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 301
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 32, 90

Conread position: 48-301
Cow position: chrX:20752027-20752280 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 182
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 153, 24

Conread position: 48-356
Cow position: chrX:11589828-11589507 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 228
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 46, 97

Conread position: 48-402
Cow position: chrX:15814861-15815209 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 28, 89

Conread position: 49-490
Cow position: chrX:27514633-27515073 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 298
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 27, 190

Conread position: 50-340
Cow position: chrX:41198870-41199173 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 213
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 26, 96

Conread position: 50-438
Cow position: chrX:13382090-13382488 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 276
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 31, 117

Conread position: 50-504
Cow position: chrX:48010360-48010833 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 308
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 27, 0

Conread position: 50-529
Cow position: chrX:30963106-30962622 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 226

Conread position: 51-485
Cow position: chrX:22821814-22822264 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 153

Conread position: 53-316
Cow position: chrX:14900952-14900689 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 187
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 100, 92

Conread position: 53-427
Cow position: chrX:5900226-5900612 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 273
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 24, 106

Conread position: 53-436
Cow position: chrX:6278737-6278337 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 53-507
Cow position: chrX:38549217-38549678 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 167

Conread position: 53-511
Cow position: chrX:9201316-9201778 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 144

Conread position: 53-515
Cow position: chrX:36975718-36976193 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 240

Conread position: 53-532
Cow position: chrX:17231503-17231993 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 93

Conread position: 54-265
Cow position: chrX:16790067-16789861 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 54-268
Cow position: chrX:37048811-37048583 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 167
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 145

Conread position: 54-392
Cow position: chrX:42499259-42498930 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 222
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 27, 90

Conread position: 54-398
Cow position: chrX:26625907-26625548 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 27, 147

Conread position: 54-486
Cow position: chrX:35542661-35543094 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 144

Conread position: 54-507
Cow position: chrX:7721754-7722205 (view UCSC Genome Browser custom track)
Alignm length: 472
Alignm identity: 321
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 22, 145

Conread position: 54-512
Cow position: chrX:42381330-42380875 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 92

Conread position: 55-278
Cow position: chrX:13265849-13265621 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 114

Conread position: 55-514
Cow position: chrX:6488358-6488804 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 329
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 28, 5

Conread position: 55-515
Cow position: chrX:7513287-7513752 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 303
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 89, 29

Conread position: 56-419
Cow position: chrX:4044077-4043723 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 5

Conread position: 57-259
Cow position: chrX:48684450-48684239 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 24, 44

Conread position: 57-396
Cow position: chrX:11856202-11856551 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 40

Conread position: 57-416
Cow position: chrX:39558575-39558209 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 252
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 19, 113

Conread position: 58-500
Cow position: chrX:22074574-22075019 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 132

Conread position: 58-500
Cow position: chrX:44396789-44397235 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 307
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 65, 87

Conread position: 59-507
Cow position: chrX:36283120-36283571 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 238

Conread position: 60-523
Cow position: chrX:11633454-11633928 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 142

Conread position: 61-268
Cow position: chrX:43049119-43049343 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 61-315
Cow position: chrX:29509667-29509398 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 61-335
Cow position: chrX:10437888-10437608 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 173
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 20, 185

Conread position: 61-447
Cow position: chrX:17042467-17042854 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 266
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 20, 217

Conread position: 61-512
Cow position: chrX:1465964-1466400 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 88

Conread position: 61-544
Cow position: chrX:21642701-21642213 (view UCSC Genome Browser custom track)
Alignm length: 495
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 46

Conread position: 62-274
Cow position: chrX:19019334-19019105 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 170
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 40

Conread position: 62-444
Cow position: chrX:1503117-1503496 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 264
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 80, 131

Conread position: 62-504
Cow position: chrX:46073044-46072602 (view UCSC Genome Browser custom track)
Alignm length: 459
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 85

Conread position: 63-431
Cow position: chrX:23091660-23092025 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 127

Conread position: 64-499
Cow position: chrX:29602053-29601606 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 133

Conread position: 67-417
Cow position: chrX:29120841-29121189 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 138, 14

Conread position: 67-435
Cow position: chrX:32623365-32623730 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 250
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 14, 79

Conread position: 67-525
Cow position: chrX:48236594-48237066 (view UCSC Genome Browser custom track)
Alignm length: 482
Alignm identity: 313
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 13, 235

Conread position: 68-258
Cow position: chrX:45015369-45015563 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 76

Conread position: 68-415
Cow position: chrX:40567383-40567761 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 259
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 70-521
Cow position: chrX:12980045-12979589 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 44

Conread position: 72-504
Cow position: chrX:8869623-8869176 (view UCSC Genome Browser custom track)
Alignm length: 455
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 131

Conread position: 72-507
Cow position: chrX:9425953-9425531 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 313
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 79, 72

Conread position: 73-507
Cow position: chrX:3579735-3580176 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 8

Conread position: 74-512
Cow position: chrX:27174785-27175236 (view UCSC Genome Browser custom track)
Alignm length: 457
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 269

Conread position: 75-466
Cow position: chrX:47046728-47046323 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 278
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 76, 208

Conread position: 75-503
Cow position: chrX:29542427-29542001 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 114

Conread position: 75-536
Cow position: chrX:32329952-32330435 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 34

Conread position: 75-538
Cow position: chrX:34411631-34412108 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 121

Conread position: 77-321
Cow position: chrX:36961428-36961687 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 208

Conread position: 77-513
Cow position: chrX:46587611-46588057 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 70

Conread position: 77-522
Cow position: chrX:16996300-16996741 (view UCSC Genome Browser custom track)
Alignm length: 456
Alignm identity: 300
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 79, 68

Conread position: 80-311
Cow position: chrX:17908487-17908252 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 173
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 24, 20

Conread position: 80-495
Cow position: chrX:29545083-29544667 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 62

Conread position: 82-500
Cow position: chrX:1499468-1499878 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 65

Conread position: 86-509
Cow position: chrX:10252379-10251969 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 291
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 65, 17

Conread position: 86-544
Cow position: chrX:33000706-33001164 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 59

Conread position: 94-425
Cow position: chrX:31311836-31312179 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 99

Conread position: 94-438
Cow position: chrX:23785464-23785811 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 250
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 50, 140

Conread position: 94-438
Cow position: chrX:43730404-43730061 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 241
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 63, 49

Conread position: 95-438
Cow position: chrX:42235722-42235362 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 245
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 11, 6

Conread position: 103-437
Cow position: chrX:36067839-36068177 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 228
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 48, 42

Conread position: 103-496
Cow position: chrX:7336646-7337067 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 260
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 159

Conread position: 103-500
Cow position: chrX:35383200-35382818 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 274
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 41, 94

Conread position: 103-503
Cow position: chrX:32820849-32821267 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 9

Conread position: 106-400
Cow position: chrX:22454264-22453973 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 206
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 89, 13

Conread position: 110-512
Cow position: chrX:22387421-22387007 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 176

Conread position: 110-525
Cow position: chrX:35885903-35885486 (view UCSC Genome Browser custom track)
Alignm length: 429
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 153

Conread position: 111-474
Cow position: chrX:169698-169343 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 34

Conread position: 114-504
Cow position: chrX:34792480-34792095 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 273
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 30, 61

Conread position: 114-508
Cow position: chrX:4398956-4399350 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 83

Conread position: 117-490
Cow position: chrX:4279281-4278905 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 256
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 25, 115

Conread position: 117-502
Cow position: chrX:6407382-6407770 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 77

Conread position: 117-524
Cow position: chrX:27145457-27145846 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 282
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 27, 76

Conread position: 118-503
Cow position: chrX:47186486-47186099 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 254
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 162

Conread position: 118-525
Cow position: chrX:37955672-37956094 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 27

Conread position: 124-484
Cow position: chrX:41068568-41068928 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 253
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 81, 17

Conread position: 127-451
Cow position: chrX:47166043-47165710 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 221
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 173

Conread position: 127-490
Cow position: chrX:5680087-5679716 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 237
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 77, 35

Conread position: 127-512
Cow position: chrX:36355959-36356341 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 66

Conread position: 129-490
Cow position: chrX:27227969-27228343 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 163

Conread position: 133-522
Cow position: chrX:29680410-29679999 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 60

Conread position: 135-496
Cow position: chrX:40685476-40685109 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 294

Conread position: 135-525
Cow position: chrX:870314-869933 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 257
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 44, 10

Conread position: 139-431
Cow position: chrX:38728594-38728890 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 155

Conread position: 139-532
Cow position: chrX:41870932-41871310 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 57

Conread position: 145-426
Cow position: chrX:7710678-7710388 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 196
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 31, 133

Conread position: 148-508
Cow position: chrX:20168425-20168787 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 16

Conread position: 148-514
Cow position: chrX:34505179-34504814 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 42

Conread position: 149-406
Cow position: chrX:38066581-38066324 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 25, 38

Conread position: 149-415
Cow position: chrX:37986102-37986365 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 184
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 107, 156

Conread position: 149-430
Cow position: chrX:11614568-11614847 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 204
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 56, 129

Conread position: 149-438
Cow position: chrX:616393-616095 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 210
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 54, 37

Conread position: 149-438
Cow position: chrX:9365806-9365513 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 54, 47

Conread position: 149-450
Cow position: chrX:42873261-42873563 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 226
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 35, 25

Conread position: 149-466
Cow position: chrX:31252287-31252598 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 228
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 57, 41

Conread position: 149-490
Cow position: chrX:30840425-30840755 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 234
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 163, 40

Conread position: 149-500
Cow position: chrX:21986423-21986077 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 243
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 60, 47

Conread position: 149-504
Cow position: chrX:34313902-34314249 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 74, 26

Conread position: 149-509
Cow position: chrX:25207974-25207628 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 74

Conread position: 149-514
Cow position: chrX:15231785-15231421 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 239
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 55, 27

Conread position: 149-522
Cow position: chrX:41027026-41027408 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 46

Conread position: 149-524
Cow position: chrX:29723610-29724002 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 273
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 55, 146

Conread position: 149-525
Cow position: chrX:23561745-23562122 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 261
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 201, 56

Conread position: 149-527
Cow position: chrX:5919365-5919741 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 41

Conread position: 149-531
Cow position: chrX:45110528-45110906 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 243
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 30

Conread position: 150-493
Cow position: chrX:45875261-45875607 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 233
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 47, 130

Conread position: 150-512
Cow position: chrX:18204593-18204230 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 260
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 50, 125

Conread position: 151-371
Cow position: chrX:27685118-27685345 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 136

Conread position: 151-526
Cow position: chrX:34315397-34315777 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 263
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 87, 11

Conread position: 152-476
Cow position: chrX:14275861-14275548 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 219
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 120, 12

Conread position: 153-488
Cow position: chrX:34222586-34222926 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 20

Conread position: 155-504
Cow position: chrX:33654972-33654615 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 107

Conread position: 159-437
Cow position: chrX:46433365-46433652 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 204
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 32, 123

Conread position: 159-525
Cow position: chrX:47609685-47610040 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 234
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 20, 58

Conread position: 162-425
Cow position: chrX:5679684-5679422 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 182
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 114

Conread position: 163-449
Cow position: chrX:27119582-27119862 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 41, 114

Conread position: 163-493
Cow position: chrX:44744934-44744605 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 226
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 155

Conread position: 164-511
Cow position: chrX:24331662-24332012 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 110

Conread position: 164-521
Cow position: chrX:46291023-46291388 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 249
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 25

Conread position: 165-500
Cow position: chrX:29229894-29230231 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 234
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 8, 26

Conread position: 165-529
Cow position: chrX:47657270-47657649 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 253
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 5

Conread position: 166-502
Cow position: chrX:38654544-38654206 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 242
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 39, 24

Conread position: 166-525
Cow position: chrX:9651139-9650782 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 39, 24

Conread position: 168-514
Cow position: chrX:5063148-5063475 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 239
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 124, 62

Conread position: 169-522
Cow position: chrX:17949601-17949246 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 248
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 25, 100

Conread position: 172-502
Cow position: chrX:6559553-6559230 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 238
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 13, 24

Conread position: 172-512
Cow position: chrX:21327797-21328150 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 172-514
Cow position: chrX:16348676-16348327 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 242
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 33, 24

Conread position: 173-511
Cow position: chrX:13923764-13924098 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 235
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 34, 82

Conread position: 174-511
Cow position: chrX:44339428-44339086 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 159

Conread position: 183-419
Cow position: chrX:22915123-22914898 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 19, 0

Conread position: 183-438
Cow position: chrX:45884071-45883808 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 176
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 17

Conread position: 184-499
Cow position: chrX:31515073-31515395 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 21, 12

Conread position: 186-457
Cow position: chrX:33205059-33204787 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 185
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 19, 72

Conread position: 189-437
Cow position: chrX:29194142-29194390 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 184
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 14, 83

Conread position: 189-501
Cow position: chrX:10516164-10516479 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 189-514
Cow position: chrX:34837146-34836834 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 224
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 16, 74

Conread position: 190-507
Cow position: chrX:12095864-12095540 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 75

Conread position: 190-508
Cow position: chrX:27261097-27261422 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 246

Conread position: 191-505
Cow position: chrX:42855365-42855692 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 230
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 14, 99

Conread position: 191-515
Cow position: chrX:19469587-19469276 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 13, 0

Conread position: 192-516
Cow position: chrX:13121848-13122186 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 243
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 27, 6

Conread position: 193-500
Cow position: chrX:27075129-27074827 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 208
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 53, 13

Conread position: 193-504
Cow position: chrX:38560478-38560778 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 206
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 78, 16

Conread position: 193-511
Cow position: chrX:40680523-40680850 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 198-459
Cow position: chrX:16575040-16575296 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 197
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 7, 71

Conread position: 200-419
Cow position: chrX:46429896-46429675 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 68, 0

Conread position: 202-489
Cow position: chrX:23113200-23113505 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 21, 219

Conread position: 202-500
Cow position: chrX:39220002-39220312 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 218
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 21, 75

Conread position: 209-522
Cow position: chrX:39352714-39353018 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 222
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 10, 77

Conread position: 211-504
Cow position: chrX:42893854-42894150 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 209
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 10, 24

Conread position: 211-522
Cow position: chrX:1088205-1087902 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 217
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 40, 11

Conread position: 212-439
Cow position: chrX:32978139-32977922 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 212-501
Cow position: chrX:27511364-27511646 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 7, 58

Conread position: 213-465
Cow position: chrX:31627042-31626790 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 54, 130

Conread position: 215-457
Cow position: chrX:36514952-36514711 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 160
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 128, 9

Conread position: 215-467
Cow position: chrX:4515626-4515879 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 186
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 111, 9

Conread position: 217-440
Cow position: chrX:6260205-6259985 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 218-488
Cow position: chrX:44703128-44702853 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 189
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 134, 59

Conread position: 218-504
Cow position: chrX:25036931-25037220 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 202
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 208, 63

Conread position: 218-517
Cow position: chrX:15820541-15820847 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 213
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 178, 49

Conread position: 218-523
Cow position: chrX:36866115-36866420 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 212
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 50, 79

Conread position: 219-451
Cow position: chrX:6541791-6541550 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 170
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 73, 53

Conread position: 224-504
Cow position: chrX:4109140-4109413 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 202
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 47, 0

Conread position: 224-512
Cow position: chrX:38321437-38321146 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 202
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 51, 36

Conread position: 226-419
Cow position: chrX:19943285-19943092 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 46, 131

Conread position: 226-525
Cow position: chrX:5134427-5134724 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 208
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 127, 62

Conread position: 226-542
Cow position: chrX:20957200-20957499 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 227
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 54, 0

Conread position: 229-504
Cow position: chrX:20678198-20677914 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 201
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 193

Conread position: 230-490
Cow position: chrX:4645956-4645700 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 42, 0

Conread position: 230-508
Cow position: chrX:40108560-40108280 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 102, 22

Conread position: 230-525
Cow position: chrX:47013446-47013150 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 192
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 224, 13

Conread position: 234-512
Cow position: chrX:43150380-43150667 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 207
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 44, 176

Conread position: 237-493
Cow position: chrX:47061357-47061603 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 181
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 45

Conread position: 237-494
Cow position: chrX:19660500-19660236 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 178
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 43

Conread position: 237-500
Cow position: chrX:24749050-24749311 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 195
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 64, 55

Conread position: 237-504
Cow position: chrX:6599821-6599546 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 197
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 38, 30

Conread position: 237-504
Cow position: chrX:24457590-24457319 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 182
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 44, 24

Conread position: 237-508
Cow position: chrX:18964862-18964602 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 195
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 41, 90

Conread position: 237-512
Cow position: chrX:19394515-19394792 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 190
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 160, 185

Conread position: 237-518
Cow position: chrX:48558710-48558990 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 197
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 29, 49

Conread position: 238-505
Cow position: chrX:28940210-28940473 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 194
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 126, 11

Conread position: 240-478
Cow position: chrX:44660622-44660386 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 175
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 154, 16

Conread position: 240-484
Cow position: chrX:48532280-48532522 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 158
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 54, 21

Conread position: 240-504
Cow position: chrX:4289405-4289662 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 182
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 34, 183

Conread position: 240-504
Cow position: chrX:44202081-44201817 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 173
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 36, 27

Conread position: 240-522
Cow position: chrX:44591096-44590815 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 182
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 242-512
Cow position: chrX:41941594-41941860 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 197
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 50, 24

Conread position: 243-415
Cow position: chrX:10305379-10305211 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 246-488
Cow position: chrX:32318275-32318512 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 27, 182

Conread position: 247-500
Cow position: chrX:20743575-20743823 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 27, 171

Conread position: 250-479
Cow position: chrX:1397602-1397828 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 168, 11

Conread position: 250-511
Cow position: chrX:43152181-43151916 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 173
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 226, 0

Conread position: 250-512
Cow position: chrX:44859887-44859626 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 175
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 29, 11

Conread position: 250-515
Cow position: chrX:46793770-46793511 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 188
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 11, 0

Conread position: 254-515
Cow position: chrX:42836164-42836420 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 257-490
Cow position: chrX:42282559-42282791 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 19, 26

Conread position: 257-533
Cow position: chrX:42450033-42449750 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 258-519
Cow position: chrX:42479817-42480069 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 213, 22

Conread position: 258-522
Cow position: chrX:35275969-35276232 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 0

Conread position: 259-504
Cow position: chrX:24633667-24633914 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 180
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 184

Conread position: 259-504
Cow position: chrX:42432528-42432286 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 64, 19

Conread position: 259-530
Cow position: chrX:12972666-12972931 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 188
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 44, 21

Conread position: 261-504
Cow position: chrX:3806670-3806907 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 240, 11

Conread position: 261-524
Cow position: chrX:43008593-43008858 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 15, 0

Conread position: 264-475
Cow position: chrX:11859548-11859337 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 148, 97

Conread position: 267-500
Cow position: chrX:47345319-47345554 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 125, 145

Conread position: 268-507
Cow position: chrX:26205455-26205227 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 24, 28

Conread position: 268-529
Cow position: chrX:16984634-16984886 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 125, 0

Conread position: 268-532
Cow position: chrX:16836293-16836034 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 241, 68

Conread position: 269-529
Cow position: chrX:27668963-27668708 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 11

Conread position: 270-465
Cow position: chrX:31829465-31829274 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 271-490
Cow position: chrX:28836890-28837098 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 25

Conread position: 271-504
Cow position: chrX:39290355-39290583 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 174
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 199, 134

Conread position: 272-501
Cow position: chrX:29478721-29478947 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 170
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 82, 0

Conread position: 272-512
Cow position: chrX:23335975-23335739 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 26, 20

Conread position: 272-515
Cow position: chrX:17292952-17293198 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 231, 0

Conread position: 272-522
Cow position: chrX:26979792-26979544 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 136, 86

Conread position: 272-523
Cow position: chrX:30672398-30672138 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 186
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 86, 8

Conread position: 273-500
Cow position: chrX:37856351-37856585 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 7

Conread position: 275-504
Cow position: chrX:32943076-32942852 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 196, 0

Conread position: 276-513
Cow position: chrX:24170728-24170488 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 176
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 144, 95

Conread position: 277-515
Cow position: chrX:753155-753401 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 18

Conread position: 277-528
Cow position: chrX:2935959-2936203 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 140, 0

Conread position: 285-503
Cow position: chrX:32910114-32910324 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 86, 0

Conread position: 285-506
Cow position: chrX:35392284-35392074 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 7, 11

Conread position: 286-493
Cow position: chrX:34420746-34420953 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 139, 8

Conread position: 286-500
Cow position: chrX:1122532-1122323 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 160
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 45, 0

Conread position: 286-504
Cow position: chrX:16324003-16323787 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 130, 41

Conread position: 286-504
Cow position: chrX:40336922-40337139 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 164
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 52, 0

Conread position: 286-514
Cow position: chrX:39180222-39179991 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 185, 92

Conread position: 286-521
Cow position: chrX:35285184-35285420 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 177
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 217, 0

Conread position: 286-525
Cow position: chrX:25049271-25049032 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 158
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 286-534
Cow position: chrX:4328172-4327921 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 6, 10

Conread position: 287-425
Cow position: chrX:23266427-23266566 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 132, 0

Conread position: 287-504
Cow position: chrX:29467766-29467554 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 156
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 134, 0

Conread position: 289-501
Cow position: chrX:3494809-3494596 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 5, 0

Conread position: 289-522
Cow position: chrX:38967901-38968141 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 7, 67

Conread position: 289-525
Cow position: chrX:1719129-1719351 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 137, 0

Conread position: 290-538
Cow position: chrX:15996806-15996561 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 35, 15

Conread position: 292-515
Cow position: chrX:16763910-16763690 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 31, 137

Conread position: 293-523
Cow position: chrX:28067868-28068098 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 295-435
Cow position: chrX:47342136-47342275 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 295-490
Cow position: chrX:41810148-41809961 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 131, 0

Conread position: 295-490
Cow position: chrX:47079647-47079841 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 191, 0

Conread position: 295-500
Cow position: chrX:38301829-38302038 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 137, 0

Conread position: 295-501
Cow position: chrX:19761774-19761974 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 131, 0

Conread position: 295-504
Cow position: chrX:907966-908169 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 295-504
Cow position: chrX:19356489-19356692 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 158
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 37, 55

Conread position: 295-512
Cow position: chrX:31479991-31480202 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 115, 59

Conread position: 295-519
Cow position: chrX:19018811-19018585 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 171
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 136, 0

Conread position: 295-523
Cow position: chrX:5026276-5026497 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 174, 123

Conread position: 295-525
Cow position: chrX:20345473-20345700 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 30, 0

Conread position: 295-541
Cow position: chrX:35658819-35659060 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 217, 41

Conread position: 297-525
Cow position: chrX:32877353-32877127 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 205, 120

Conread position: 298-513
Cow position: chrX:29451525-29451308 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 161
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 94, 10

Conread position: 299-512
Cow position: chrX:8642070-8642281 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 161
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 65, 0

Conread position: 299-514
Cow position: chrX:32866899-32867107 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 130, 0

Conread position: 299-525
Cow position: chrX:19717545-19717760 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 299-527
Cow position: chrX:51872-51651 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 169
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 222, 28

Conread position: 304-500
Cow position: chrX:4612853-4612650 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 112, 101

Conread position: 305-507
Cow position: chrX:37749953-37749763 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 151
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 32, 37

Conread position: 305-509
Cow position: chrX:23860964-23860763 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 142
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 114, 137

Conread position: 305-512
Cow position: chrX:2314589-2314382 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 305-512
Cow position: chrX:4091954-4092158 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 153
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 166, 0

Conread position: 305-525
Cow position: chrX:44040211-44040425 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 0

Conread position: 305-525
Cow position: chrX:44995528-44995749 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 165
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 50, 211

Conread position: 305-529
Cow position: chrX:46909845-46910060 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 116, 0

Conread position: 305-537
Cow position: chrX:11781283-11781506 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 162
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 117, 81

Conread position: 305-538
Cow position: chrX:17524354-17524122 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 201, 0

Conread position: 307-504
Cow position: chrX:23359079-23358889 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 29, 0

Conread position: 307-504
Cow position: chrX:48822310-48822114 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 110, 0

Conread position: 312-508
Cow position: chrX:876805-876615 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 312-513
Cow position: chrX:17498359-17498560 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 313-503
Cow position: chrX:34991402-34991588 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 114, 0

Conread position: 313-504
Cow position: chrX:6480558-6480367 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 19, 8

Conread position: 313-512
Cow position: chrX:11454224-11454410 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 313-514
Cow position: chrX:44123293-44123488 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 190, 113

Conread position: 313-521
Cow position: chrX:10415215-10415007 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 313-522
Cow position: chrX:46079123-46079331 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 155
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 111, 80

Conread position: 313-525
Cow position: chrX:27270413-27270618 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 159
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 62, 114

Conread position: 313-536
Cow position: chrX:41435511-41435285 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 112, 195

Conread position: 314-490
Cow position: chrX:30824028-30824199 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 103, 0

Conread position: 314-512
Cow position: chrX:40046536-40046327 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 108, 22

Conread position: 315-499
Cow position: chrX:45759711-45759892 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 149, 112

Conread position: 315-501
Cow position: chrX:13347313-13347494 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 315-505
Cow position: chrX:41858842-41858655 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 84, 115

Conread position: 315-509
Cow position: chrX:20583706-20583893 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 118, 0

Conread position: 315-528
Cow position: chrX:35409792-35410002 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 62, 0

Conread position: 316-504
Cow position: chrX:31983544-31983350 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 106, 0

Conread position: 316-541
Cow position: chrX:21288569-21288344 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 111

Conread position: 317-504
Cow position: chrX:23471824-23471640 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 101, 111

Conread position: 319-504
Cow position: chrX:42086874-42087054 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 320-422
Cow position: chrX:11582266-11582368 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 84
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 320-499
Cow position: chrX:35681612-35681790 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 97, 0

Conread position: 320-503
Cow position: chrX:755969-756147 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 320-504
Cow position: chrX:46068714-46068536 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 92, 0

Conread position: 320-505
Cow position: chrX:41453347-41453528 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 115, 0

Conread position: 320-508
Cow position: chrX:1101602-1101783 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 183, 87

Conread position: 320-521
Cow position: chrX:45412194-45411997 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 145
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 114, 77

Conread position: 320-522
Cow position: chrX:42875257-42875452 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 155
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 101, 0

Conread position: 320-536
Cow position: chrX:44225686-44225471 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 206, 174

Conread position: 321-503
Cow position: chrX:41166779-41166602 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 79, 0

Conread position: 321-524
Cow position: chrX:36569010-36568804 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 34, 99

Conread position: 321-528
Cow position: chrX:37867299-37867506 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 323-500
Cow position: chrX:8326952-8327129 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 323-504
Cow position: chrX:17744679-17744849 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 325-503
Cow position: chrX:11602431-11602260 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 327-498
Cow position: chrX:41363807-41363628 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 327-500
Cow position: chrX:11653822-11653991 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 0

Conread position: 327-504
Cow position: chrX:42760304-42760481 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 327-507
Cow position: chrX:16412229-16412050 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 92, 138

Conread position: 327-512
Cow position: chrX:1121315-1121130 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 327-512
Cow position: chrX:4169979-4169792 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 140, 78

Conread position: 327-512
Cow position: chrX:37752054-37751875 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 91, 0

Conread position: 327-513
Cow position: chrX:597422-597241 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 44, 0

Conread position: 327-522
Cow position: chrX:6389133-6389325 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 38, 0

Conread position: 327-525
Cow position: chrX:1960373-1960176 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 108, 0

Conread position: 327-526
Cow position: chrX:3605932-3606131 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 327-529
Cow position: chrX:47100545-47100337 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 101, 0

Conread position: 327-544
Cow position: chrX:46533253-46533037 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 201, 0

Conread position: 328-525
Cow position: chrX:11529395-11529587 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 9, 103

Conread position: 329-512
Cow position: chrX:5915242-5915429 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 0

Conread position: 331-502
Cow position: chrX:28106903-28107072 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 101, 0

Conread position: 331-504
Cow position: chrX:5097743-5097566 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 28, 155

Conread position: 331-512
Cow position: chrX:8759682-8759859 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 62, 30

Conread position: 331-525
Cow position: chrX:41199280-41199471 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 40, 99

Conread position: 332-504
Cow position: chrX:4444478-4444656 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 332-508
Cow position: chrX:28850780-28850949 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 332-512
Cow position: chrX:6267719-6267906 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 89, 49

Conread position: 332-531
Cow position: chrX:14925329-14925530 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 171, 0

Conread position: 332-537
Cow position: chrX:32747789-32747980 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 170, 89

Conread position: 334-500
Cow position: chrX:3494986-3494826 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 334-520
Cow position: chrX:4750273-4750093 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 180, 77

Conread position: 336-522
Cow position: chrX:37867493-37867680 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 167, 0

Conread position: 337-448
Cow position: chrX:35019314-35019423 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 337-490
Cow position: chrX:10237851-10237699 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 72, 0

Conread position: 337-502
Cow position: chrX:22552917-22552753 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 137, 0

Conread position: 337-512
Cow position: chrX:11589305-11589131 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 104, 0

Conread position: 337-525
Cow position: chrX:26882018-26881830 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 337-526
Cow position: chrX:3032981-3032793 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 138, 170

Conread position: 337-537
Cow position: chrX:23485583-23485794 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 338-499
Cow position: chrX:40556396-40556240 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 124
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 53, 84

Conread position: 338-500
Cow position: chrX:6640490-6640648 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 338-500
Cow position: chrX:34270624-34270785 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 126
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 108, 0

Conread position: 338-507
Cow position: chrX:10278933-10279106 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 73, 142

Conread position: 338-507
Cow position: chrX:16801200-16801036 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 338-512
Cow position: chrX:39642559-39642392 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 338-529
Cow position: chrX:1938077-1938266 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 80, 0

Conread position: 339-510
Cow position: chrX:4559797-4559968 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 339-514
Cow position: chrX:9451409-9451582 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 92, 45

Conread position: 339-522
Cow position: chrX:10154983-10154801 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 83, 32

Conread position: 340-512
Cow position: chrX:14135743-14135911 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 343-502
Cow position: chrX:48574289-48574128 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 343-511
Cow position: chrX:45044520-45044689 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 343-523
Cow position: chrX:41215390-41215570 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 139
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 343-525
Cow position: chrX:37542470-37542289 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 126
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 160, 74

Conread position: 344-500
Cow position: chrX:28167048-28167203 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 345-507
Cow position: chrX:39094252-39094100 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 124
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 149, 39

Conread position: 345-508
Cow position: chrX:33678403-33678238 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 54, 0

Conread position: 347-504
Cow position: chrX:45657868-45657707 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 80, 0

Conread position: 347-507
Cow position: chrX:16770136-16770296 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 347-525
Cow position: chrX:34194009-34193833 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 170, 0

Conread position: 348-500
Cow position: chrX:4486951-4486800 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 72, 0

Conread position: 348-522
Cow position: chrX:30042018-30041855 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 73, 0

Conread position: 353-503
Cow position: chrX:37717800-37717949 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 353-507
Cow position: chrX:3542934-3543096 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 356-508
Cow position: chrX:13785141-13784980 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 64, 100

Conread position: 356-511
Cow position: chrX:17929082-17929233 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 356-514
Cow position: chrX:42314811-42314651 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 135, 0

Conread position: 356-525
Cow position: chrX:35509598-35509433 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 133
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 70, 0

Conread position: 357-487
Cow position: chrX:25049019-25048891 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 357-500
Cow position: chrX:43028314-43028453 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 357-514
Cow position: chrX:42506867-42506708 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 62, 0

Conread position: 358-504
Cow position: chrX:31279841-31279699 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 358-512
Cow position: chrX:11670769-11670923 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 359-515
Cow position: chrX:40108259-40108105 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 359-537
Cow position: chrX:35390675-35390497 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 59

Conread position: 360-522
Cow position: chrX:19511032-19510862 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 60, 122

Conread position: 361-503
Cow position: chrX:9367402-9367543 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 112

Conread position: 361-522
Cow position: chrX:1996366-1996204 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 142, 0

Conread position: 364-508
Cow position: chrX:39887125-39886980 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 368-500
Cow position: chrX:10479842-10479974 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 374-506
Cow position: chrX:15534113-15533980 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 374-515
Cow position: chrX:42159040-42159183 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 132, 0

Conread position: 374-516
Cow position: chrX:42216532-42216391 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 126, 57

Conread position: 375-522
Cow position: chrX:41194005-41194152 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 106, 18

Conread position: 375-525
Cow position: chrX:783544-783692 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 128, 142

Conread position: 381-507
Cow position: chrX:6855965-6856091 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 382-503
Cow position: chrX:42220595-42220474 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 390-512
Cow position: chrX:19162016-19161893 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 391-520
Cow position: chrX:23185222-23185093 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 391-525
Cow position: chrX:38080263-38080398 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 112, 0

Conread position: 391-529
Cow position: chrX:45228585-45228723 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 15, 118

Conread position: 393-525
Cow position: chrX:18196116-18196248 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 92, 122

Conread position: 393-525
Cow position: chrX:32590288-32590155 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 113, 0

Show alignments to all cow chromosomes.