Cow genome map
| Conread name: | Pig1-47E13 |
| Conread position: | 1-128 |
| Cow position: | chr14:12035478-12035349 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1-129 |
| Cow position: | chr14:24839852-24839719 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-129 |
| Cow position: | chr14:25403865-25403997 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 59, 10 |
| Conread position: | 1-129 |
| Cow position: | chr14:25954129-25954258 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-129 |
| Cow position: | chr14:49488032-49487899 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-130 |
| Cow position: | chr14:803757-803623 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-130 |
| Cow position: | chr14:14316954-14316824 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 1-130 |
| Cow position: | chr14:19129576-19129443 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 59, 9 |
| Conread position: | 1-130 |
| Cow position: | chr14:25779168-25779039 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 97 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-130 |
| Cow position: | chr14:28924239-28924105 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-130 |
| Cow position: | chr14:37883845-37883979 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-130 |
| Cow position: | chr14:42437094-42436962 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-130 |
| Cow position: | chr14:47672814-47672944 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 47, 40 |
| Conread position: | 1-131 |
| Cow position: | chr14:21535235-21535370 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-131 |
| Cow position: | chr14:35018682-35018817 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-134 |
| Cow position: | chr14:15039544-15039678 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 59, 9 |
| Conread position: | 1-141 |
| Cow position: | chr14:27275232-27275089 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-146 |
| Cow position: | chr14:33644028-33643881 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 55, 45 |
| Conread position: | 1-149 |
| Cow position: | chr14:48412811-48412964 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-155 |
| Cow position: | chr14:4877160-4877322 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-161 |
| Cow position: | chr14:8541141-8541305 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 59, 125 |
| Conread position: | 1-170 |
| Cow position: | chr14:8786479-8786657 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-170 |
| Cow position: | chr14:36289730-36289911 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 61, 109 |
| Conread position: | 1-170 |
| Cow position: | chr14:44084419-44084596 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 53, 13 |
| Conread position: | 1-173 |
| Cow position: | chr14:7695337-7695161 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 55, 9 |
| Conread position: | 1-173 |
| Cow position: | chr14:21357626-21357455 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 59, 134 |
| Conread position: | 1-173 |
| Cow position: | chr14:23078721-23078894 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 56, 136 |
| Conread position: | 1-196 |
| Cow position: | chr14:25381495-25381296 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 126, 18 |
| Conread position: | 1-198 |
| Cow position: | chr14:5835977-5835773 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 130, 52 |
| Conread position: | 1-198 |
| Cow position: | chr14:43192910-43192707 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 106, 52 |
| Conread position: | 1-201 |
| Cow position: | chr14:13810007-13809794 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 44 |
| Conread position: | 1-204 |
| Cow position: | chr14:2038737-2038948 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 54, 203 |
| Conread position: | 1-205 |
| Cow position: | chr14:19618681-19618906 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 9 |
| Conread position: | 1-205 |
| Cow position: | chr14:36555085-36555293 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 63, 9 |
| Conread position: | 1-208 |
| Cow position: | chr14:37479422-37479208 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 131, 47 |
| Conread position: | 2-130 |
| Cow position: | chr14:17841222-17841354 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 107 |
| Conread position: | 2-131 |
| Cow position: | chr14:28115117-28115250 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 58, 99 |
| Conread position: | 2-132 |
| Cow position: | chr14:20384915-20385050 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 2-170 |
| Cow position: | chr14:18309237-18309420 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 2-170 |
| Cow position: | chr14:18904539-18904708 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 119 |
| Conread position: | 2-170 |
| Cow position: | chr14:41252925-41253099 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 2-198 |
| Cow position: | chr14:30662058-30661867 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 63, 8 |
| Conread position: | 3-130 |
| Cow position: | chr14:24981524-24981396 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 3-150 |
| Cow position: | chr14:26919065-26918917 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 58, 13 |
| Conread position: | 4-170 |
| Cow position: | chr14:39037289-39037119 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 56, 92 |
| Conread position: | 5-130 |
| Cow position: | chr14:20481776-20481903 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 5-203 |
| Cow position: | chr14:33773983-33774186 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 20, 130 |
| Conread position: | 5-227 |
| Cow position: | chr14:12511834-12512076 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 57, 82 |
| Conread position: | 5-228 |
| Cow position: | chr14:49021833-49022052 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 52, 75 |
| Conread position: | 6-173 |
| Cow position: | chr14:38144041-38144212 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 54, 131 |
| Conread position: | 6-195 |
| Cow position: | chr14:19487361-19487159 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 6-197 |
| Cow position: | chr14:27733668-27733452 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 8-130 |
| Cow position: | chr14:15211991-15211868 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 15, 91 |
| Conread position: | 8-216 |
| Cow position: | chr14:25399135-25398928 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 141 |
| Conread position: | 9-130 |
| Cow position: | chr14:3943487-3943613 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 9-130 |
| Cow position: | chr14:4282446-4282569 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 9-130 |
| Cow position: | chr14:4991065-4990939 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 9-130 |
| Cow position: | chr14:8101853-8101730 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 9-130 |
| Cow position: | chr14:22941665-22941791 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 9-130 |
| Cow position: | chr14:33830364-33830239 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 9-130 |
| Cow position: | chr14:37447404-37447526 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 9-130 |
| Cow position: | chr14:46998102-46997976 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 9-131 |
| Cow position: | chr14:11056670-11056794 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 9-190 |
| Cow position: | chr14:1859550-1859743 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 44, 91 |
| Conread position: | 9-195 |
| Cow position: | chr14:19863370-19863557 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 51, 129 |
| Conread position: | 9-198 |
| Cow position: | chr14:14622115-14622325 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 9-198 |
| Cow position: | chr14:29723528-29723733 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 45, 87 |
| Conread position: | 9-208 |
| Cow position: | chr14:7959838-7959636 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 12 |
| Conread position: | 9-214 |
| Cow position: | chr14:23478886-23478684 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 51, 125 |
| Conread position: | 9-253 |
| Cow position: | chr14:1868730-1868999 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 37, 244 |
| Conread position: | 10-130 |
| Cow position: | chr14:23424321-23424199 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 105 |
| Conread position: | 10-130 |
| Cow position: | chr14:23443082-23442960 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 105 |
| Conread position: | 10-130 |
| Cow position: | chr14:33309441-33309566 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 10-198 |
| Cow position: | chr14:12954323-12954532 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 11-199 |
| Cow position: | chr14:16352405-16352211 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 48, 79 |
| Conread position: | 11-222 |
| Cow position: | chr14:33247368-33247589 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 37, 174 |
| Conread position: | 13-130 |
| Cow position: | chr14:14466404-14466519 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 13-130 |
| Cow position: | chr14:18350798-18350920 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 23-148 |
| Cow position: | chr14:15491205-15491074 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 27-168 |
| Cow position: | chr14:22381533-22381671 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 105 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 43-195 |
| Cow position: | chr14:37467958-37468110 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 87 |
| Conread position: | 45-198 |
| Cow position: | chr14:14580851-14580686 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 51-198 |
| Cow position: | chr14:34355693-34355837 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 16, 92 |
| Conread position: | 61-170 |
| Cow position: | chr14:41267726-41267843 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 97 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 61-195 |
| Cow position: | chr14:40806605-40806752 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
Show alignments to all cow chromosomes.