Cow genome map

Conread name: Pig1-47E13

Conread position: 1-128
Cow position: chr15:16112518-16112386 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 56, 0

Conread position: 1-128
Cow position: chr15:22871727-22871600 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 108
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 93

Conread position: 1-129
Cow position: chr15:794903-795036 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 1-129
Cow position: chr15:5930011-5929883 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 46, 22

Conread position: 1-129
Cow position: chr15:9497382-9497515 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 1-129
Cow position: chr15:39316724-39316857 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 1-129
Cow position: chr15:50660743-50660607 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 1-130
Cow position: chr15:12001428-12001558 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 1-130
Cow position: chr15:14176381-14176515 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 113
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 1-130
Cow position: chr15:20422664-20422794 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 1-130
Cow position: chr15:21821806-21821940 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-130
Cow position: chr15:22136801-22136674 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 1-130
Cow position: chr15:29810237-29810108 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 61, 122

Conread position: 1-130
Cow position: chr15:34284293-34284427 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 9

Conread position: 1-130
Cow position: chr15:36388409-36388275 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 1-130
Cow position: chr15:38883266-38883133 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 1-130
Cow position: chr15:39520287-39520152 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 1-130
Cow position: chr15:43788371-43788246 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 14, 57

Conread position: 1-130
Cow position: chr15:44280219-44280086 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 59, 9

Conread position: 1-131
Cow position: chr15:4178826-4178961 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-131
Cow position: chr15:26911958-26912089 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 1-131
Cow position: chr15:31637419-31637284 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 1-168
Cow position: chr15:10660437-10660610 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 1-170
Cow position: chr15:37205165-37204997 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 6

Conread position: 1-173
Cow position: chr15:26158481-26158654 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 65, 119

Conread position: 1-182
Cow position: chr15:31495106-31495294 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 56, 22

Conread position: 1-195
Cow position: chr15:9107152-9106943 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 56, 113

Conread position: 1-195
Cow position: chr15:13285139-13284928 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 59, 122

Conread position: 1-195
Cow position: chr15:41582998-41582791 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 59, 0

Conread position: 1-198
Cow position: chr15:38827206-38827425 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-198
Cow position: chr15:41527858-41528076 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 166
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 1-198
Cow position: chr15:50322712-50322501 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 1-214
Cow position: chr15:9781587-9781376 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 11, 130

Conread position: 1-214
Cow position: chr15:38846019-38845797 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 59, 121

Conread position: 1-230
Cow position: chr15:36773580-36773825 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 53, 96

Conread position: 1-244
Cow position: chr15:32977726-32977986 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 185
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 10, 254

Conread position: 2-128
Cow position: chr15:21893895-21893765 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 2-129
Cow position: chr15:11995910-11996041 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 125

Conread position: 2-130
Cow position: chr15:2141186-2141319 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 2-130
Cow position: chr15:14261142-14261273 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 2-130
Cow position: chr15:31025109-31024977 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 2-130
Cow position: chr15:43626586-43626453 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 2-137
Cow position: chr15:39599560-39599424 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 2-138
Cow position: chr15:20351949-20351808 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 2-139
Cow position: chr15:17100594-17100734 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 58, 8

Conread position: 2-141
Cow position: chr15:6970104-6969957 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 58, 141

Conread position: 2-173
Cow position: chr15:19186501-19186673 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 58, 74

Conread position: 2-173
Cow position: chr15:32324091-32324263 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 58, 152

Conread position: 2-197
Cow position: chr15:23992961-23992759 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 152, 9

Conread position: 3-130
Cow position: chr15:21389051-21389180 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 3-130
Cow position: chr15:22939209-22939341 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 4-199
Cow position: chr15:50177224-50177027 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 133

Conread position: 5-130
Cow position: chr15:5234887-5235013 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 57, 0

Conread position: 5-198
Cow position: chr15:43599303-43599117 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 55, 132

Conread position: 6-125
Cow position: chr15:286591-286467 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 6-130
Cow position: chr15:16616299-16616176 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 106, 54

Conread position: 6-130
Cow position: chr15:23719370-23719499 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 6-130
Cow position: chr15:40999958-41000086 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 7-130
Cow position: chr15:22443876-22444000 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 8-154
Cow position: chr15:35425703-35425847 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 51, 62

Conread position: 8-170
Cow position: chr15:27973106-27973279 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 8-195
Cow position: chr15:31042980-31042775 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 50, 121

Conread position: 9-120
Cow position: chr15:35417515-35417631 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 9-129
Cow position: chr15:4138242-4138121 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 51, 69

Conread position: 9-130
Cow position: chr15:1297849-1297723 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr15:5726435-5726309 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr15:12870754-12870880 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr15:15154410-15154285 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 108

Conread position: 9-130
Cow position: chr15:27900401-27900526 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 9-130
Cow position: chr15:31928786-31928912 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 9-130
Cow position: chr15:35440972-35441094 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 106
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 9-130
Cow position: chr15:51632953-51633074 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 51, 14

Conread position: 9-131
Cow position: chr15:48590135-48590258 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 36, 46

Conread position: 9-142
Cow position: chr15:29604590-29604727 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 51, 128

Conread position: 9-150
Cow position: chr15:26530000-26529854 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 9-163
Cow position: chr15:30982049-30981887 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 9-170
Cow position: chr15:662358-662537 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 9-182
Cow position: chr15:6128856-6129031 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 103

Conread position: 9-198
Cow position: chr15:13554463-13554273 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 48, 128

Conread position: 9-214
Cow position: chr15:6276155-6275956 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 7

Conread position: 10-129
Cow position: chr15:6037346-6037469 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 10-130
Cow position: chr15:18776642-18776767 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 10-130
Cow position: chr15:26919166-26919291 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 10-169
Cow position: chr15:22531771-22531601 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 13

Conread position: 11-198
Cow position: chr15:30958108-30958302 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 49, 126

Conread position: 12-130
Cow position: chr15:20487096-20487219 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 12-198
Cow position: chr15:9648600-9648799 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 144

Conread position: 12-215
Cow position: chr15:8230460-8230673 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 158
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 48, 132

Conread position: 17-195
Cow position: chr15:26718820-26719006 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 17-198
Cow position: chr15:24411518-24411328 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 43, 10

Conread position: 23-130
Cow position: chr15:40309487-40309376 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 37, 80

Conread position: 25-198
Cow position: chr15:36458108-36458289 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 31, 156

Conread position: 27-149
Cow position: chr15:32456840-32456963 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 27-202
Cow position: chr15:12837349-12837522 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 35

Conread position: 31-130
Cow position: chr15:29793105-29793209 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 88
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 33-198
Cow position: chr15:503266-503438 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 27, 96

Show alignments to all cow chromosomes.