Cow genome map

Conread name: Pig1-47E13

Conread position: 1-126
Cow position: chr17:4213754-4213885 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-126
Cow position: chr17:25126362-25126492 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 1-126
Cow position: chr17:27203035-27202904 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 5, 0

Conread position: 1-128
Cow position: chr17:4833516-4833384 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 1-130
Cow position: chr17:5900381-5900515 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-130
Cow position: chr17:11215218-11215086 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 0

Conread position: 1-130
Cow position: chr17:11224117-11224245 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 59, 9

Conread position: 1-130
Cow position: chr17:11832102-11831969 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 112
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 9

Conread position: 1-130
Cow position: chr17:13244033-13243904 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 55, 76

Conread position: 1-130
Cow position: chr17:16158503-16158637 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 1-130
Cow position: chr17:17193505-17193631 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 1-130
Cow position: chr17:17410305-17410439 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 1-130
Cow position: chr17:20993026-20992896 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 5, 46

Conread position: 1-130
Cow position: chr17:21738862-21738728 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 1-130
Cow position: chr17:26802921-26802793 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 1-130
Cow position: chr17:27440188-27440319 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-130
Cow position: chr17:28468140-28468268 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 68, 0

Conread position: 1-130
Cow position: chr17:32349083-32349213 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 1-152
Cow position: chr17:7590451-7590295 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 1-170
Cow position: chr17:1469392-1469569 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 9

Conread position: 1-172
Cow position: chr17:18860709-18860534 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 59, 115

Conread position: 1-173
Cow position: chr17:20929253-20929429 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 60, 132

Conread position: 1-174
Cow position: chr17:21293030-21292859 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 115

Conread position: 1-186
Cow position: chr17:25097474-25097672 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 39

Conread position: 1-194
Cow position: chr17:2275482-2275684 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 1-196
Cow position: chr17:33275735-33275532 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 10

Conread position: 1-198
Cow position: chr17:38362973-38362773 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 131, 43

Conread position: 1-201
Cow position: chr17:24077419-24077630 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 162
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 60, 20

Conread position: 1-206
Cow position: chr17:5688349-5688153 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 154, 55

Conread position: 1-211
Cow position: chr17:27429591-27429809 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 132, 40

Conread position: 1-214
Cow position: chr17:923891-924104 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 166
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 52, 113

Conread position: 1-217
Cow position: chr17:7142873-7143117 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 0

Conread position: 2-117
Cow position: chr17:7851100-7851220 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 2-128
Cow position: chr17:27048169-27048299 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 2-129
Cow position: chr17:9746529-9746657 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 108
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 2-130
Cow position: chr17:9940704-9940841 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 2-130
Cow position: chr17:20848537-20848668 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 109
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 55, 9

Conread position: 2-131
Cow position: chr17:9911773-9911904 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 2-131
Cow position: chr17:11215875-11215748 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 80

Conread position: 2-173
Cow position: chr17:949988-950161 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 60, 157

Conread position: 2-173
Cow position: chr17:15354944-15355119 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 55, 144

Conread position: 2-198
Cow position: chr17:12556586-12556790 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 9

Conread position: 2-205
Cow position: chr17:21489609-21489387 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 9

Conread position: 2-215
Cow position: chr17:10769498-10769285 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 135

Conread position: 2-240
Cow position: chr17:7760456-7760229 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 63, 150

Conread position: 3-126
Cow position: chr17:43957674-43957801 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 54, 121

Conread position: 3-130
Cow position: chr17:22564202-22564330 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 104

Conread position: 3-131
Cow position: chr17:25502127-25502257 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 4-118
Cow position: chr17:37129214-37129333 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 5-130
Cow position: chr17:22057012-22056882 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 5-130
Cow position: chr17:31990949-31991078 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 107

Conread position: 5-131
Cow position: chr17:20932347-20932478 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 5-131
Cow position: chr17:27142761-27142892 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 5-196
Cow position: chr17:16616830-16617027 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 111

Conread position: 5-216
Cow position: chr17:14025895-14025680 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 51, 133

Conread position: 8-149
Cow position: chr17:9565326-9565465 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 9-128
Cow position: chr17:8079332-8079456 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 9-129
Cow position: chr17:8690421-8690307 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 9-129
Cow position: chr17:20874418-20874541 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 51, 8

Conread position: 9-129
Cow position: chr17:25032462-25032337 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 9-130
Cow position: chr17:5719891-5720017 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 9-130
Cow position: chr17:6848817-6848940 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr17:11281082-11280954 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 9-130
Cow position: chr17:21922614-21922488 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr17:28814473-28814347 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 9-130
Cow position: chr17:30718398-30718272 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr17:34836191-34836317 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr17:37816173-37816049 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 51, 111

Conread position: 9-130
Cow position: chr17:38263470-38263344 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr17:40312726-40312851 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 51, 79

Conread position: 9-131
Cow position: chr17:9854004-9854123 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 9-131
Cow position: chr17:43717307-43717189 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 41

Conread position: 9-141
Cow position: chr17:7698071-7698204 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 51, 71

Conread position: 9-152
Cow position: chr17:2662444-2662592 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 9-170
Cow position: chr17:11101783-11101615 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 51, 65

Conread position: 9-173
Cow position: chr17:25930519-25930352 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 51, 100

Conread position: 9-177
Cow position: chr17:15702376-15702550 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 51, 69

Conread position: 9-196
Cow position: chr17:12342461-12342275 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 128

Conread position: 9-197
Cow position: chr17:34836088-34835886 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 9-214
Cow position: chr17:36864650-36864868 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 51, 177

Conread position: 10-130
Cow position: chr17:15684530-15684656 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 10-130
Cow position: chr17:27613248-27613365 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 10-131
Cow position: chr17:1562759-1562640 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 11-130
Cow position: chr17:8108332-8108212 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 102
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 11-130
Cow position: chr17:37430483-37430359 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 11-198
Cow position: chr17:12288817-12289014 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 19-195
Cow position: chr17:27303938-27303743 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 20-129
Cow position: chr17:10508403-10508289 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 26-126
Cow position: chr17:10802918-10803019 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 29-225
Cow position: chr17:20234251-20234463 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 51-235
Cow position: chr17:19613314-19613130 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 142
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 80, 49

Conread position: 74-214
Cow position: chr17:21619685-21619536 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 58, 0

Show alignments to all cow chromosomes.