Cow genome map

Conread name: Pig1-47E13

Conread position: 1-129
Cow position: chr18:17005198-17005331 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-129
Cow position: chr18:25282615-25282483 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 1-130
Cow position: chr18:3211816-3211950 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 1-130
Cow position: chr18:4673247-4673376 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 63, 9

Conread position: 1-130
Cow position: chr18:4872010-4872135 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 76

Conread position: 1-130
Cow position: chr18:5701188-5701320 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 56, 6

Conread position: 1-130
Cow position: chr18:6399694-6399564 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 1-130
Cow position: chr18:11867275-11867412 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-130
Cow position: chr18:21782628-21782759 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 1-130
Cow position: chr18:22055936-22055799 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 1-130
Cow position: chr18:24342781-24342915 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 0

Conread position: 1-130
Cow position: chr18:33157756-33157887 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 125

Conread position: 1-130
Cow position: chr18:51392701-51392571 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 46

Conread position: 1-130
Cow position: chr18:56172072-56171942 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-131
Cow position: chr18:35367253-35367122 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 61, 10

Conread position: 1-131
Cow position: chr18:45558086-45558221 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 10

Conread position: 1-138
Cow position: chr18:56165920-56166060 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 131

Conread position: 1-150
Cow position: chr18:35889157-35889008 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 1-169
Cow position: chr18:47525345-47525521 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 5, 137

Conread position: 1-170
Cow position: chr18:47693004-47693183 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 1-173
Cow position: chr18:37382150-37381980 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 55, 34

Conread position: 1-175
Cow position: chr18:11754072-11754246 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 9

Conread position: 1-195
Cow position: chr18:912166-911960 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 156
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 5, 185

Conread position: 1-198
Cow position: chr18:5632206-5632431 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 1-198
Cow position: chr18:5711712-5711510 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 55, 32

Conread position: 1-199
Cow position: chr18:33299843-33300051 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 52, 16

Conread position: 1-207
Cow position: chr18:31711626-31711402 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 54, 131

Conread position: 1-259
Cow position: chr18:24719251-24719521 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 47, 188

Conread position: 2-124
Cow position: chr18:51212781-51212903 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 75

Conread position: 2-125
Cow position: chr18:4182248-4182121 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 107

Conread position: 2-128
Cow position: chr18:43555585-43555454 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 2-129
Cow position: chr18:48828835-48828704 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 2-130
Cow position: chr18:16997193-16997326 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 2-130
Cow position: chr18:56044496-56044625 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 2-170
Cow position: chr18:20318103-20317934 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 93

Conread position: 2-170
Cow position: chr18:49015068-49015245 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 2-170
Cow position: chr18:56301832-56302005 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 134

Conread position: 2-198
Cow position: chr18:5072471-5072251 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 2-210
Cow position: chr18:29796489-29796270 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 157
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 134

Conread position: 2-217
Cow position: chr18:51643426-51643185 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 174
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 215

Conread position: 3-170
Cow position: chr18:47565767-47565946 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 64, 0

Conread position: 4-130
Cow position: chr18:32883248-32883373 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 56, 94

Conread position: 4-131
Cow position: chr18:18369418-18369289 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 121

Conread position: 4-170
Cow position: chr18:49655626-49655810 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 110

Conread position: 5-127
Cow position: chr18:35012375-35012248 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 5-129
Cow position: chr18:14172265-14172140 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 5-130
Cow position: chr18:6609916-6609779 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 5-130
Cow position: chr18:21102830-21102704 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 41, 50

Conread position: 5-130
Cow position: chr18:22214430-22214560 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 5-130
Cow position: chr18:42747534-42747660 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 5-130
Cow position: chr18:56191019-56190890 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 5-138
Cow position: chr18:19295830-19295960 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 92

Conread position: 5-170
Cow position: chr18:47125458-47125283 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 5-173
Cow position: chr18:46048695-46048864 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 6

Conread position: 5-198
Cow position: chr18:40035938-40036128 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 55, 35

Conread position: 6-130
Cow position: chr18:4203985-4203858 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 6-130
Cow position: chr18:10656381-10656511 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 6-131
Cow position: chr18:27388527-27388656 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 102

Conread position: 6-138
Cow position: chr18:15025616-15025753 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 51, 122

Conread position: 7-200
Cow position: chr18:15301086-15301284 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 11, 130

Conread position: 8-128
Cow position: chr18:14888238-14888361 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 8-130
Cow position: chr18:27109347-27109220 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 8-170
Cow position: chr18:6075450-6075280 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 9-127
Cow position: chr18:2864044-2863921 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr18:247743-247623 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 15, 53

Conread position: 9-130
Cow position: chr18:4556220-4556097 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr18:5647759-5647885 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 9-130
Cow position: chr18:10322752-10322878 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 0

Conread position: 9-130
Cow position: chr18:11377311-11377436 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 74

Conread position: 9-130
Cow position: chr18:12058949-12059069 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 47, 23

Conread position: 9-130
Cow position: chr18:19883478-19883605 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 9-130
Cow position: chr18:23162839-23162958 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 9-130
Cow position: chr18:36458880-36459003 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 9-130
Cow position: chr18:37023604-37023478 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 9-130
Cow position: chr18:43020456-43020332 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 9-130
Cow position: chr18:46072409-46072535 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr18:51192794-51192668 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr18:51850611-51850492 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 14

Conread position: 9-154
Cow position: chr18:30586275-30586125 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 9-170
Cow position: chr18:50359278-50359454 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 142
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 48, 0

Conread position: 9-181
Cow position: chr18:2619267-2619088 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 155

Conread position: 9-198
Cow position: chr18:1732922-1732743 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 50, 84

Conread position: 9-201
Cow position: chr18:29390243-29390040 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 50

Conread position: 10-130
Cow position: chr18:19273149-19273024 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 10-130
Cow position: chr18:53642801-53642678 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 53, 46

Conread position: 10-170
Cow position: chr18:19849806-19849642 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 10-201
Cow position: chr18:46647209-46647003 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 157
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 49, 0

Conread position: 11-131
Cow position: chr18:45985677-45985552 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 5, 13

Conread position: 11-170
Cow position: chr18:5766361-5766537 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 11-173
Cow position: chr18:30341232-30341071 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 51, 143

Conread position: 13-215
Cow position: chr18:20462745-20462525 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 35, 199

Conread position: 14-130
Cow position: chr18:47410494-47410615 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 17-170
Cow position: chr18:380886-381045 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 120

Conread position: 17-170
Cow position: chr18:18568957-18569107 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 138, 34

Conread position: 18-198
Cow position: chr18:49981484-49981292 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 27, 120

Conread position: 26-198
Cow position: chr18:48242161-48242337 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 77, 31

Conread position: 33-252
Cow position: chr18:35582068-35581829 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 35-200
Cow position: chr18:28189751-28189566 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 36-213
Cow position: chr18:28297889-28297701 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 100

Conread position: 43-198
Cow position: chr18:26730852-26731016 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 98, 160

Conread position: 45-214
Cow position: chr18:33492342-33492528 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 168

Show alignments to all cow chromosomes.