Cow genome map

Conread name: Pig1-47E13

Conread position: 1-112
Cow position: chr19:51401050-51400938 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-128
Cow position: chr19:50682482-50682353 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-128
Cow position: chr19:53840480-53840608 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 1-129
Cow position: chr19:20670946-20670813 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 1-129
Cow position: chr19:25807340-25807214 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 1-130
Cow position: chr19:729783-729653 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 5, 87

Conread position: 1-130
Cow position: chr19:2221115-2220981 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 1-130
Cow position: chr19:2965502-2965634 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 45, 91

Conread position: 1-130
Cow position: chr19:3216977-3217108 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 47, 26

Conread position: 1-130
Cow position: chr19:4503183-4503314 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 113
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 1-130
Cow position: chr19:6079398-6079272 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 59, 107

Conread position: 1-130
Cow position: chr19:19919501-19919368 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 122

Conread position: 1-130
Cow position: chr19:25410882-25410753 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 64, 57

Conread position: 1-130
Cow position: chr19:25526242-25526378 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 1-130
Cow position: chr19:26976107-26975973 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-130
Cow position: chr19:38111430-38111559 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 97
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 1-130
Cow position: chr19:39622828-39622696 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 1-130
Cow position: chr19:39649116-39648982 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 38, 0

Conread position: 1-130
Cow position: chr19:40051432-40051299 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 10

Conread position: 1-130
Cow position: chr19:41024185-41024318 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 9

Conread position: 1-130
Cow position: chr19:42235989-42236122 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 56, 9

Conread position: 1-131
Cow position: chr19:1664230-1664095 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 1-131
Cow position: chr19:31595261-31595396 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 1-131
Cow position: chr19:34758042-34757907 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 1-131
Cow position: chr19:52750798-52750663 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-138
Cow position: chr19:38664360-38664222 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 102
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 1-169
Cow position: chr19:39613205-39613022 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 100

Conread position: 1-170
Cow position: chr19:10971137-10970957 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 1-173
Cow position: chr19:21816927-21817099 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 59, 156

Conread position: 1-173
Cow position: chr19:34166332-34166502 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 10

Conread position: 1-173
Cow position: chr19:34608237-34608066 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 59, 153

Conread position: 1-173
Cow position: chr19:39254486-39254307 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 1-214
Cow position: chr19:15092172-15091939 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 1-216
Cow position: chr19:36245533-36245316 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 135

Conread position: 2-130
Cow position: chr19:2224135-2224009 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 2-130
Cow position: chr19:10081036-10081169 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 2-130
Cow position: chr19:11424354-11424223 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 2-130
Cow position: chr19:23304526-23304396 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 107
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 39, 8

Conread position: 2-130
Cow position: chr19:39781481-39781614 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 2-131
Cow position: chr19:4800704-4800837 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 9

Conread position: 2-131
Cow position: chr19:7637273-7637140 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 8

Conread position: 2-150
Cow position: chr19:17273771-17273626 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 128, 48

Conread position: 2-195
Cow position: chr19:10242544-10242745 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 58, 118

Conread position: 2-202
Cow position: chr19:2577527-2577723 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 173, 59

Conread position: 2-214
Cow position: chr19:30007153-30007389 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 3-130
Cow position: chr19:10114668-10114541 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 64

Conread position: 3-202
Cow position: chr19:3870569-3870790 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 5-131
Cow position: chr19:46094672-46094541 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 5-217
Cow position: chr19:46713601-46713819 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 55, 185

Conread position: 6-130
Cow position: chr19:8128270-8128399 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 6-130
Cow position: chr19:15863082-15862956 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 6-130
Cow position: chr19:37467096-37466967 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 6-194
Cow position: chr19:47986824-47987030 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 54, 189

Conread position: 8-129
Cow position: chr19:43560568-43560686 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 8-162
Cow position: chr19:22134182-22134024 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 9-126
Cow position: chr19:24956269-24956151 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 9-127
Cow position: chr19:990443-990323 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 9-129
Cow position: chr19:13316450-13316328 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr19:6344042-6344167 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 51, 88

Conread position: 9-130
Cow position: chr19:7675202-7675328 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr19:15362732-15362601 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 9-130
Cow position: chr19:25652788-25652666 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 0

Conread position: 9-130
Cow position: chr19:36624449-36624328 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 53, 65

Conread position: 9-130
Cow position: chr19:43373007-43373133 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 9-130
Cow position: chr19:43647381-43647511 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 9-131
Cow position: chr19:16694064-16693936 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 9-173
Cow position: chr19:15887352-15887182 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 9-174
Cow position: chr19:36845218-36845387 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 148

Conread position: 9-195
Cow position: chr19:48829847-48829670 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 148, 18

Conread position: 9-198
Cow position: chr19:41695693-41695485 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 161
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 173

Conread position: 9-201
Cow position: chr19:21176773-21176555 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 9-204
Cow position: chr19:39385073-39384853 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 10-130
Cow position: chr19:11191647-11191526 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 10-130
Cow position: chr19:49290485-49290363 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 10-135
Cow position: chr19:268323-268453 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 11-130
Cow position: chr19:33237144-33237268 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 11-170
Cow position: chr19:28037936-28037765 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 11-218
Cow position: chr19:6531857-6532085 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 169
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 69

Conread position: 12-130
Cow position: chr19:7676106-7675986 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 13-131
Cow position: chr19:25763086-25763206 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 13-201
Cow position: chr19:20310661-20310479 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 14-130
Cow position: chr19:11866334-11866217 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 44, 61

Conread position: 17-130
Cow position: chr19:30551993-30552111 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 0

Conread position: 17-161
Cow position: chr19:38500143-38500297 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 20-141
Cow position: chr19:17068836-17068959 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 23-213
Cow position: chr19:37560211-37560005 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 39, 0

Conread position: 27-207
Cow position: chr19:32763379-32763549 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 30-130
Cow position: chr19:52356241-52356346 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 30-173
Cow position: chr19:39586117-39585971 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 32, 131

Conread position: 33-130
Cow position: chr19:6417605-6417703 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 86
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 0

Conread position: 34-131
Cow position: chr19:8034353-8034255 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 84
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 36-208
Cow position: chr19:23409601-23409785 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 57-202
Cow position: chr19:42904032-42904184 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 99, 24

Conread position: 61-185
Cow position: chr19:36832381-36832505 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 91, 71

Conread position: 72-205
Cow position: chr19:32666757-32666902 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 63, 0

Show alignments to all cow chromosomes.