Cow genome map

Conread name: Pig1-47E13

Conread position: 1-126
Cow position: chr21:5898366-5898237 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 1-126
Cow position: chr21:18790527-18790401 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 5, 32

Conread position: 1-126
Cow position: chr21:19258857-19258983 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 104
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 1-127
Cow position: chr21:45971136-45971008 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 52, 10

Conread position: 1-130
Cow position: chr21:395903-396036 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 1-130
Cow position: chr21:734629-734758 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 110
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 55, 39

Conread position: 1-130
Cow position: chr21:868890-868755 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 110
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 1-130
Cow position: chr21:3585333-3585199 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-130
Cow position: chr21:8213243-8213112 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 1-130
Cow position: chr21:17265966-17265831 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 128

Conread position: 1-130
Cow position: chr21:25383059-25383195 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 1-130
Cow position: chr21:30256234-30256105 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 59, 76

Conread position: 1-130
Cow position: chr21:41597847-41597980 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 55, 9

Conread position: 1-130
Cow position: chr21:41610201-41610339 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 1-130
Cow position: chr21:41974339-41974209 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 1-130
Cow position: chr21:42841562-42841428 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 1-130
Cow position: chr21:44592174-44592040 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 1-131
Cow position: chr21:12461932-12461796 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-131
Cow position: chr21:21907393-21907264 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 69, 34

Conread position: 1-131
Cow position: chr21:31159437-31159567 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 61, 74

Conread position: 1-131
Cow position: chr21:40266160-40266291 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 52, 119

Conread position: 1-138
Cow position: chr21:1511328-1511466 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 1-170
Cow position: chr21:13036867-13036698 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 71, 60

Conread position: 1-171
Cow position: chr21:8206807-8206984 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 95

Conread position: 1-187
Cow position: chr21:17642949-17642748 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 155
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 56, 82

Conread position: 1-195
Cow position: chr21:1059115-1059318 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 54, 22

Conread position: 1-195
Cow position: chr21:15544185-15543979 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 131, 34

Conread position: 1-198
Cow position: chr21:4098908-4099110 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 132

Conread position: 1-198
Cow position: chr21:15911438-15911641 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 161
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 59, 134

Conread position: 1-205
Cow position: chr21:24797692-24797896 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 59, 133

Conread position: 1-205
Cow position: chr21:42209594-42209375 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 59, 145

Conread position: 2-130
Cow position: chr21:957709-957839 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 114

Conread position: 2-130
Cow position: chr21:42463652-42463525 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 120, 59

Conread position: 2-130
Cow position: chr21:47363700-47363565 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 2-131
Cow position: chr21:1764830-1764698 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 8

Conread position: 2-131
Cow position: chr21:6051539-6051673 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 2-131
Cow position: chr21:7581869-7581735 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 2-162
Cow position: chr21:33563044-33563203 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 57, 76

Conread position: 2-215
Cow position: chr21:7768474-7768707 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 174
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 48, 0

Conread position: 3-128
Cow position: chr21:12207765-12207635 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 5-130
Cow position: chr21:36795642-36795772 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 5-130
Cow position: chr21:42007422-42007293 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 36, 0

Conread position: 5-131
Cow position: chr21:17062963-17063091 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 106
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 5-174
Cow position: chr21:47764078-47763906 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 130
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 50, 101

Conread position: 6-129
Cow position: chr21:23672789-23672913 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 6-130
Cow position: chr21:46470226-46470352 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 6-141
Cow position: chr21:5464790-5464928 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 54, 35

Conread position: 8-198
Cow position: chr21:44861071-44860877 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 124, 52

Conread position: 9-126
Cow position: chr21:41579799-41579921 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 9-127
Cow position: chr21:23460180-23460299 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 9-129
Cow position: chr21:30835409-30835531 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 104
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 47, 36

Conread position: 9-129
Cow position: chr21:32237325-32237447 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr21:21169449-21169327 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 9-130
Cow position: chr21:22210203-22210077 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr21:26244957-26245083 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr21:28924152-28924278 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 102
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr21:36508281-36508403 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 104
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr21:42562675-42562796 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 23

Conread position: 9-131
Cow position: chr21:10633594-10633471 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 107

Conread position: 9-141
Cow position: chr21:13585016-13584881 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 38

Conread position: 9-170
Cow position: chr21:38900817-38900989 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 51, 84

Conread position: 9-197
Cow position: chr21:7823404-7823597 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 19, 83

Conread position: 9-198
Cow position: chr21:13395634-13395844 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 9-214
Cow position: chr21:6388042-6388249 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 122

Conread position: 10-128
Cow position: chr21:46132618-46132741 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 10-129
Cow position: chr21:13365387-13365510 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 10-129
Cow position: chr21:23322034-23321910 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 0

Conread position: 10-130
Cow position: chr21:10538211-10538086 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 10-130
Cow position: chr21:20318557-20318679 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 10-214
Cow position: chr21:29978716-29978497 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 167
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 50, 181

Conread position: 11-130
Cow position: chr21:36763106-36763230 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 11-136
Cow position: chr21:35647783-35647653 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 11-229
Cow position: chr21:7493222-7493019 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 44, 24

Conread position: 12-120
Cow position: chr21:17695617-17695507 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 47, 94

Conread position: 12-130
Cow position: chr21:15976679-15976801 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 47, 84

Conread position: 13-130
Cow position: chr21:32339693-32339571 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 102
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 44, 0

Conread position: 13-233
Cow position: chr21:38121148-38121376 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 160
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 42, 215

Conread position: 14-214
Cow position: chr21:9905801-9905598 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 47, 140

Conread position: 15-228
Cow position: chr21:13418181-13417966 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 77

Conread position: 18-130
Cow position: chr21:19927212-19927098 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 73

Conread position: 18-198
Cow position: chr21:33791324-33791134 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 154
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 42, 5

Conread position: 20-155
Cow position: chr21:26735463-26735598 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 69

Conread position: 23-131
Cow position: chr21:27569112-27569003 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 24-198
Cow position: chr21:44214185-44214374 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 24-207
Cow position: chr21:46973092-46972893 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 151
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 6

Conread position: 30-130
Cow position: chr21:29418636-29418737 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 85
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 33-233
Cow position: chr21:2785419-2785205 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 156
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 99, 28

Conread position: 58-222
Cow position: chr21:30205276-30205105 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 74, 113

Conread position: 61-204
Cow position: chr21:36817037-36817181 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 72

Conread position: 61-214
Cow position: chr21:9710631-9710472 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 96, 12

Conread position: 72-251
Cow position: chr21:34581580-34581393 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 139

Show alignments to all cow chromosomes.