Cow genome map

Conread name: Pig1-47E13

Conread position: 1-125
Cow position: chr22:45846111-45846239 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 80

Conread position: 1-126
Cow position: chr22:23372896-23372766 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 1-128
Cow position: chr22:7074354-7074479 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 107
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 61, 10

Conread position: 1-128
Cow position: chr22:30643166-30643034 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-129
Cow position: chr22:2502794-2502926 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 1-129
Cow position: chr22:13878149-13878278 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 38

Conread position: 1-130
Cow position: chr22:530601-530476 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 1-130
Cow position: chr22:534467-534601 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-130
Cow position: chr22:4075919-4075784 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 1-130
Cow position: chr22:4583529-4583663 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 124

Conread position: 1-130
Cow position: chr22:8840574-8840707 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 53, 9

Conread position: 1-130
Cow position: chr22:8882983-8883113 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 1-130
Cow position: chr22:10285938-10286072 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 115
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 8

Conread position: 1-130
Cow position: chr22:13286423-13286550 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 1-130
Cow position: chr22:14372146-14372272 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 5, 56

Conread position: 1-130
Cow position: chr22:16044448-16044314 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 113

Conread position: 1-130
Cow position: chr22:17814201-17814334 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 1-130
Cow position: chr22:21530391-21530257 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 112
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 13

Conread position: 1-130
Cow position: chr22:23176473-23176339 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-130
Cow position: chr22:23398436-23398302 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 1-130
Cow position: chr22:24175921-24175794 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 0

Conread position: 1-130
Cow position: chr22:28665251-28665385 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 59, 0

Conread position: 1-130
Cow position: chr22:28704152-28704286 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 1-130
Cow position: chr22:30269380-30269510 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 77

Conread position: 1-130
Cow position: chr22:32698732-32698862 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 1-130
Cow position: chr22:34726634-34726766 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 5, 104

Conread position: 1-130
Cow position: chr22:37029636-37029506 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 1-130
Cow position: chr22:42050542-42050672 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 1-131
Cow position: chr22:12315779-12315913 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 57, 90

Conread position: 1-131
Cow position: chr22:36433002-36432870 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-141
Cow position: chr22:27274730-27274587 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 56, 27

Conread position: 1-142
Cow position: chr22:17125553-17125696 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-149
Cow position: chr22:11458790-11458936 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 112

Conread position: 1-170
Cow position: chr22:2523930-2524109 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 1-170
Cow position: chr22:14509509-14509332 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 1-173
Cow position: chr22:4156849-4156675 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 56, 136

Conread position: 1-181
Cow position: chr22:21890388-21890210 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 69, 157

Conread position: 1-195
Cow position: chr22:41245216-41245424 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 49, 142

Conread position: 1-198
Cow position: chr22:5384622-5384830 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 5, 98

Conread position: 1-198
Cow position: chr22:24915803-24916026 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 163
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 1-205
Cow position: chr22:14381626-14381844 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 5, 0

Conread position: 1-223
Cow position: chr22:8733370-8733126 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 59, 217

Conread position: 1-240
Cow position: chr22:11344478-11344724 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 126

Conread position: 2-129
Cow position: chr22:3842589-3842718 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 2-129
Cow position: chr22:12188511-12188380 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 26

Conread position: 2-129
Cow position: chr22:12195598-12195467 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 26

Conread position: 2-130
Cow position: chr22:4310402-4310271 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 2-130
Cow position: chr22:10553716-10553583 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 113
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 55, 0

Conread position: 2-130
Cow position: chr22:13841109-13841241 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 47, 0

Conread position: 2-130
Cow position: chr22:28058082-28057948 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 109
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 26, 0

Conread position: 2-141
Cow position: chr22:31153922-31154068 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 55, 0

Conread position: 2-170
Cow position: chr22:12749932-12749751 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 2-173
Cow position: chr22:47555820-47555994 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 44

Conread position: 3-117
Cow position: chr22:26339724-26339843 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 3-203
Cow position: chr22:26017772-26017559 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 5-126
Cow position: chr22:26074892-26075019 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 5-130
Cow position: chr22:2912614-2912488 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 55, 101

Conread position: 5-172
Cow position: chr22:6097045-6096876 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 55, 141

Conread position: 5-198
Cow position: chr22:27322286-27322494 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 6-130
Cow position: chr22:3950225-3950354 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 107
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 40, 0

Conread position: 7-200
Cow position: chr22:27581418-27581623 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 50, 33

Conread position: 8-130
Cow position: chr22:27047431-27047311 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 57, 38

Conread position: 8-170
Cow position: chr22:15668493-15668324 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 124, 49

Conread position: 8-214
Cow position: chr22:3945353-3945559 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 120, 54

Conread position: 9-114
Cow position: chr22:43291921-43291816 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 87
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 9-128
Cow position: chr22:6326420-6326544 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 9-129
Cow position: chr22:12946198-12946081 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 9-129
Cow position: chr22:14924756-14924631 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 9-129
Cow position: chr22:24628680-24628557 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 9-130
Cow position: chr22:877491-877617 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr22:8287163-8287285 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr22:9372497-9372623 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 9-130
Cow position: chr22:10533574-10533695 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 9-130
Cow position: chr22:11130846-11130972 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr22:12968093-12967967 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr22:13222091-13222219 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 37, 0

Conread position: 9-130
Cow position: chr22:23857022-23857148 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr22:25539975-25540101 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 9-130
Cow position: chr22:28120696-28120826 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 9-131
Cow position: chr22:6936237-6936359 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 52, 84

Conread position: 9-131
Cow position: chr22:10339139-10339016 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 9-141
Cow position: chr22:8090552-8090419 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 9-149
Cow position: chr22:13735039-13734899 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 65

Conread position: 9-158
Cow position: chr22:30049590-30049438 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 137

Conread position: 9-170
Cow position: chr22:29842728-29842562 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 51, 128

Conread position: 9-173
Cow position: chr22:43237432-43237266 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 51, 129

Conread position: 9-201
Cow position: chr22:25943451-25943658 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 48, 128

Conread position: 9-212
Cow position: chr22:31599415-31599612 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 51, 74

Conread position: 9-214
Cow position: chr22:10292943-10293142 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 41

Conread position: 9-214
Cow position: chr22:23675987-23675762 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 165
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 123, 219

Conread position: 10-129
Cow position: chr22:12678445-12678321 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 10-144
Cow position: chr22:34616283-34616422 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 50, 0

Conread position: 11-170
Cow position: chr22:28672123-28672294 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 49, 0

Conread position: 11-198
Cow position: chr22:4036561-4036752 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 10

Conread position: 13-219
Cow position: chr22:25742969-25742748 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 14-126
Cow position: chr22:3239893-3240006 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 31, 104

Conread position: 17-130
Cow position: chr22:3486788-3486676 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 45

Conread position: 17-131
Cow position: chr22:12902863-12902752 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 17-198
Cow position: chr22:4054605-4054407 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 22, 18

Conread position: 35-195
Cow position: chr22:4026823-4026992 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 133

Show alignments to all cow chromosomes.