Cow genome map
| Conread name: | Pig1-47E13 |
| Conread position: | 1-126 |
| Cow position: | chr23:1742331-1742457 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-129 |
| Cow position: | chr23:27544801-27544934 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-130 |
| Cow position: | chr23:1398065-1397931 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 5, 11 |
| Conread position: | 1-130 |
| Cow position: | chr23:4726768-4726899 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 60, 107 |
| Conread position: | 1-130 |
| Cow position: | chr23:10554034-10553901 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 10 |
| Conread position: | 1-130 |
| Cow position: | chr23:26283698-26283830 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 55, 96 |
| Conread position: | 1-130 |
| Cow position: | chr23:35247342-35247475 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 10 |
| Conread position: | 1-130 |
| Cow position: | chr23:35503757-35503880 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-130 |
| Cow position: | chr23:38455205-38455070 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-131 |
| Cow position: | chr23:36172492-36172632 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-169 |
| Cow position: | chr23:38732223-38732395 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 24, 43 |
| Conread position: | 1-173 |
| Cow position: | chr23:28529974-28529804 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 143, 56 |
| Conread position: | 1-197 |
| Cow position: | chr23:23904354-23904145 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 136 |
| Conread position: | 1-214 |
| Cow position: | chr23:17484866-17484651 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 131, 15 |
| Conread position: | 1-217 |
| Cow position: | chr23:6035410-6035631 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 58, 100 |
| Conread position: | 1-237 |
| Cow position: | chr23:14838773-14838517 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 9, 249 |
| Conread position: | 2-120 |
| Cow position: | chr23:4562860-4562983 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-129 |
| Cow position: | chr23:21309437-21309306 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 115 |
| Conread position: | 2-130 |
| Cow position: | chr23:1936668-1936535 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 2-130 |
| Cow position: | chr23:5723520-5723642 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 2-131 |
| Cow position: | chr23:15743066-15743199 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 2-171 |
| Cow position: | chr23:5603310-5603131 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 2-196 |
| Cow position: | chr23:23409708-23409915 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 58, 76 |
| Conread position: | 2-198 |
| Cow position: | chr23:7696533-7696743 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 2-204 |
| Cow position: | chr23:40081488-40081709 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 2-213 |
| Cow position: | chr23:22414325-22414112 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 115 |
| Conread position: | 2-217 |
| Cow position: | chr23:19872702-19872478 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 68, 44 |
| Conread position: | 3-130 |
| Cow position: | chr23:4104373-4104503 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 4-130 |
| Cow position: | chr23:20435088-20434956 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 4-152 |
| Cow position: | chr23:40781307-40781458 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 132 |
| Conread position: | 4-170 |
| Cow position: | chr23:29345787-29345612 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 5-128 |
| Cow position: | chr23:4054195-4054323 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 104 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 5-130 |
| Cow position: | chr23:6592722-6592600 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 5-130 |
| Cow position: | chr23:9734388-9734516 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 5-130 |
| Cow position: | chr23:16700064-16699934 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 5-141 |
| Cow position: | chr23:10876376-10876519 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 6-198 |
| Cow position: | chr23:5732530-5732739 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 8-130 |
| Cow position: | chr23:3244488-3244361 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 8-130 |
| Cow position: | chr23:25864719-25864590 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 35, 28 |
| Conread position: | 8-131 |
| Cow position: | chr23:20002238-20002363 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 8-131 |
| Cow position: | chr23:21446100-21446225 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 8-214 |
| Cow position: | chr23:18322442-18322232 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 52, 156 |
| Conread position: | 9-113 |
| Cow position: | chr23:19371093-19370984 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 9-128 |
| Cow position: | chr23:18402308-18402184 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 9-129 |
| Cow position: | chr23:29479870-29479991 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 9-130 |
| Cow position: | chr23:360708-360581 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 9-130 |
| Cow position: | chr23:3835613-3835488 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 9-130 |
| Cow position: | chr23:13599324-13599448 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 9-130 |
| Cow position: | chr23:14569519-14569393 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 9-130 |
| Cow position: | chr23:30950936-30951063 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 9-130 |
| Cow position: | chr23:35656394-35656515 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 97 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 51, 10 |
| Conread position: | 9-130 |
| Cow position: | chr23:39775707-39775833 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 27, 104 |
| Conread position: | 9-131 |
| Cow position: | chr23:22298052-22297930 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-131 |
| Cow position: | chr23:24701098-24700976 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 33, 39 |
| Conread position: | 9-138 |
| Cow position: | chr23:4795155-4795285 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 64, 49 |
| Conread position: | 9-141 |
| Cow position: | chr23:12334192-12334328 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 9-149 |
| Cow position: | chr23:30655828-30655687 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 9-170 |
| Cow position: | chr23:31970552-31970385 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 9-193 |
| Cow position: | chr23:14895692-14895502 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 47, 180 |
| Conread position: | 9-214 |
| Cow position: | chr23:20388669-20388460 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 51, 179 |
| Conread position: | 9-216 |
| Cow position: | chr23:15287156-15286932 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 109 |
| Conread position: | 10-128 |
| Cow position: | chr23:37118727-37118608 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 10-130 |
| Cow position: | chr23:4336052-4336174 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 16, 7 |
| Conread position: | 10-209 |
| Cow position: | chr23:39573267-39573052 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 46, 95 |
| Conread position: | 11-130 |
| Cow position: | chr23:1767812-1767938 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 11-170 |
| Cow position: | chr23:39753100-39753267 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 113 |
| Conread position: | 11-214 |
| Cow position: | chr23:9652500-9652290 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 49, 106 |
| Conread position: | 14-209 |
| Cow position: | chr23:23197333-23197541 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 27-130 |
| Cow position: | chr23:32546265-32546163 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 37-198 |
| Cow position: | chr23:18417104-18417278 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 51-210 |
| Cow position: | chr23:22674393-22674228 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
Show alignments to all cow chromosomes.