Cow genome map
| Conread name: | Pig1-47E13 |
| Conread position: | 1-128 |
| Cow position: | chr25:30816858-30816990 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-129 |
| Cow position: | chr25:6687919-6688047 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 52, 45 |
| Conread position: | 1-129 |
| Cow position: | chr25:22730798-22730930 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 59, 92 |
| Conread position: | 1-130 |
| Cow position: | chr25:10504367-10504238 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 61, 9 |
| Conread position: | 1-130 |
| Cow position: | chr25:21893307-21893441 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-130 |
| Cow position: | chr25:23779361-23779227 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 44, 9 |
| Conread position: | 1-130 |
| Cow position: | chr25:23817872-23817737 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 1-130 |
| Cow position: | chr25:34242135-34242001 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 104 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-131 |
| Cow position: | chr25:11585488-11585622 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 1-141 |
| Cow position: | chr25:19478645-19478789 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 10 |
| Conread position: | 1-144 |
| Cow position: | chr25:8961740-8961887 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 1-198 |
| Cow position: | chr25:12778569-12778364 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 58, 134 |
| Conread position: | 1-200 |
| Cow position: | chr25:16400304-16400110 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 155, 48 |
| Conread position: | 1-203 |
| Cow position: | chr25:14720714-14720934 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 1-214 |
| Cow position: | chr25:26654880-26655106 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 1-216 |
| Cow position: | chr25:35109300-35109078 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 59, 162 |
| Conread position: | 2-129 |
| Cow position: | chr25:26701000-26701127 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 58, 116 |
| Conread position: | 2-130 |
| Cow position: | chr25:9269318-9269446 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-130 |
| Cow position: | chr25:26160935-26161072 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 2-198 |
| Cow position: | chr25:24984440-24984230 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 3-129 |
| Cow position: | chr25:22751036-22750905 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 4-169 |
| Cow position: | chr25:36081849-36082026 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 5-126 |
| Cow position: | chr25:12807016-12807137 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 55, 22 |
| Conread position: | 5-131 |
| Cow position: | chr25:4221630-4221499 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 6-121 |
| Cow position: | chr25:10359600-10359719 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 6-126 |
| Cow position: | chr25:6258857-6258984 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 8-214 |
| Cow position: | chr25:10364358-10364151 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 52, 104 |
| Conread position: | 9-126 |
| Cow position: | chr25:38982075-38982192 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 91 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 9-130 |
| Cow position: | chr25:13503410-13503537 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 9-130 |
| Cow position: | chr25:25716627-25716748 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 95 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 51, 110 |
| Conread position: | 9-130 |
| Cow position: | chr25:26072580-26072458 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 9-130 |
| Cow position: | chr25:28187967-28187842 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 51, 15 |
| Conread position: | 9-130 |
| Cow position: | chr25:30656669-30656546 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 9-131 |
| Cow position: | chr25:5920058-5920184 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 51, 120 |
| Conread position: | 9-131 |
| Cow position: | chr25:13272546-13272673 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 9-131 |
| Cow position: | chr25:13443433-13443306 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 9-141 |
| Cow position: | chr25:27801259-27801396 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 9-173 |
| Cow position: | chr25:20008109-20008276 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 45, 129 |
| Conread position: | 9-174 |
| Cow position: | chr25:30619041-30619213 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 10-130 |
| Cow position: | chr25:17403462-17403582 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 50, 9 |
| Conread position: | 10-170 |
| Cow position: | chr25:22241948-22242109 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 139, 37 |
| Conread position: | 11-130 |
| Cow position: | chr25:15218115-15218235 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 11-170 |
| Cow position: | chr25:34379126-34378964 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 126 |
| Conread position: | 12-130 |
| Cow position: | chr25:7581451-7581324 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 12-192 |
| Cow position: | chr25:26089832-26089636 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 49, 16 |
| Conread position: | 13-138 |
| Cow position: | chr25:36019685-36019557 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 15-131 |
| Cow position: | chr25:7380856-7380735 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 19-198 |
| Cow position: | chr25:12840731-12840547 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 162 |
| Conread position: | 25-195 |
| Cow position: | chr25:13321175-13321353 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 35, 112 |
| Conread position: | 25-205 |
| Cow position: | chr25:23998931-23998736 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 30, 186 |
| Conread position: | 29-213 |
| Cow position: | chr25:35625035-35624847 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 31, 106 |
Show alignments to all cow chromosomes.