Cow genome map
| Conread name: | Pig1-47E13 |
| Conread position: | 1-112 |
| Cow position: | chr28:25283176-25283286 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 1-128 |
| Cow position: | chr28:26922392-26922260 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 1-128 |
| Cow position: | chr28:27161350-27161219 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 57, 90 |
| Conread position: | 1-129 |
| Cow position: | chr28:21598276-21598141 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 1-129 |
| Cow position: | chr28:24706873-24707006 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-130 |
| Cow position: | chr28:3143897-3143768 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 59, 10 |
| Conread position: | 1-130 |
| Cow position: | chr28:4765650-4765786 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-130 |
| Cow position: | chr28:5867703-5867831 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 55, 38 |
| Conread position: | 1-130 |
| Cow position: | chr28:7388791-7388662 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 59, 49 |
| Conread position: | 1-130 |
| Cow position: | chr28:20313254-20313387 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 1-141 |
| Cow position: | chr28:15043885-15043741 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-149 |
| Cow position: | chr28:13176705-13176560 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 1-170 |
| Cow position: | chr28:13865822-13865990 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 59, 94 |
| Conread position: | 1-170 |
| Cow position: | chr28:23724486-23724302 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1-170 |
| Cow position: | chr28:26372717-26372888 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 9, 46 |
| Conread position: | 1-171 |
| Cow position: | chr28:5235858-5236042 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 54, 15 |
| Conread position: | 1-198 |
| Cow position: | chr28:555480-555689 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 56, 176 |
| Conread position: | 1-198 |
| Cow position: | chr28:25762998-25763204 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 56, 107 |
| Conread position: | 1-198 |
| Cow position: | chr28:26719319-26719534 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 1-201 |
| Cow position: | chr28:22571686-22571477 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 36, 40 |
| Conread position: | 1-205 |
| Cow position: | chr28:20397394-20397184 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 55, 136 |
| Conread position: | 1-207 |
| Cow position: | chr28:5205247-5205464 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 1-213 |
| Cow position: | chr28:16085301-16085518 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 174 |
| Conread position: | 1-245 |
| Cow position: | chr28:21008690-21008424 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 5, 220 |
| Conread position: | 2-127 |
| Cow position: | chr28:1538143-1538268 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 51, 103 |
| Conread position: | 2-130 |
| Cow position: | chr28:7698001-7697872 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 2-130 |
| Cow position: | chr28:25399850-25399978 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 106 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 2-130 |
| Cow position: | chr28:32174606-32174739 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 44, 19 |
| Conread position: | 2-130 |
| Cow position: | chr28:32179674-32179803 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 2-169 |
| Cow position: | chr28:30746753-30746572 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 2-170 |
| Cow position: | chr28:11866688-11866501 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 2-194 |
| Cow position: | chr28:25249331-25249535 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 2-207 |
| Cow position: | chr28:5931334-5931559 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 8 |
| Conread position: | 2-214 |
| Cow position: | chr28:10297833-10298058 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 60, 36 |
| Conread position: | 3-129 |
| Cow position: | chr28:26743604-26743735 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 103 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 3-169 |
| Cow position: | chr28:22813241-22813414 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 7 |
| Conread position: | 3-198 |
| Cow position: | chr28:19216800-19217016 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 3-200 |
| Cow position: | chr28:23007752-23007537 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 58, 211 |
| Conread position: | 3-201 |
| Cow position: | chr28:32365822-32366025 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 57, 126 |
| Conread position: | 4-125 |
| Cow position: | chr28:11786739-11786612 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 4-205 |
| Cow position: | chr28:25728178-25728394 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 123, 166 |
| Conread position: | 5-130 |
| Cow position: | chr28:7437482-7437362 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 57, 75 |
| Conread position: | 5-173 |
| Cow position: | chr28:19295149-19294984 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 131, 114 |
| Conread position: | 5-202 |
| Cow position: | chr28:31649066-31649271 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 103, 51 |
| Conread position: | 6-231 |
| Cow position: | chr28:8291410-8291650 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 47, 35 |
| Conread position: | 9-130 |
| Cow position: | chr28:2898973-2899099 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 9-130 |
| Cow position: | chr28:4355529-4355656 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 35 |
| Conread position: | 9-130 |
| Cow position: | chr28:6059486-6059360 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 103 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 9-130 |
| Cow position: | chr28:7008994-7008868 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 9-130 |
| Cow position: | chr28:18354344-18354217 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 9-130 |
| Cow position: | chr28:18770068-18770190 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 9-130 |
| Cow position: | chr28:19222166-19222041 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 48, 14 |
| Conread position: | 9-130 |
| Cow position: | chr28:29434444-29434318 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 9-197 |
| Cow position: | chr28:23793327-23793117 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 51, 103 |
| Conread position: | 9-198 |
| Cow position: | chr28:5193315-5193527 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 9-198 |
| Cow position: | chr28:19564244-19564031 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 9-201 |
| Cow position: | chr28:4881256-4881042 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 9-203 |
| Cow position: | chr28:21046592-21046380 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 10-130 |
| Cow position: | chr28:8149647-8149522 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 103 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 10-200 |
| Cow position: | chr28:8513495-8513302 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 62, 33 |
| Conread position: | 11-209 |
| Cow position: | chr28:7156823-7157027 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 49, 126 |
| Conread position: | 13-131 |
| Cow position: | chr28:7132099-7131977 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 13-198 |
| Cow position: | chr28:11816678-11816480 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 15-130 |
| Cow position: | chr28:19039029-19038909 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 23-170 |
| Cow position: | chr28:26784243-26784089 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 34, 91 |
| Conread position: | 23-195 |
| Cow position: | chr28:17728101-17727911 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 61 |
| Conread position: | 25-214 |
| Cow position: | chr28:21207368-21207156 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 60-233 |
| Cow position: | chr28:16767556-16767373 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 76, 148 |
Show alignments to all cow chromosomes.