Cow genome map

Conread name: Pig1-47E13

Conread position: 1-124
Cow position: chr6:38614830-38614951 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 1-126
Cow position: chr6:21061870-21061745 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 55, 61

Conread position: 1-129
Cow position: chr6:9751043-9750913 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 1-129
Cow position: chr6:37692762-37692893 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 35

Conread position: 1-130
Cow position: chr6:582261-582128 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 1-130
Cow position: chr6:17412547-17412422 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 1-130
Cow position: chr6:17997308-17997175 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 1-130
Cow position: chr6:18144202-18144342 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 49, 0

Conread position: 1-130
Cow position: chr6:19446265-19446395 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 59, 9

Conread position: 1-130
Cow position: chr6:19681516-19681380 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 1-130
Cow position: chr6:33450958-33450831 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 59, 9

Conread position: 1-130
Cow position: chr6:35990225-35990089 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 59, 0

Conread position: 1-130
Cow position: chr6:37199516-37199393 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 1-130
Cow position: chr6:54867528-54867662 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 1-130
Cow position: chr6:55535738-55535607 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 95

Conread position: 1-130
Cow position: chr6:67806004-67805870 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 0

Conread position: 1-131
Cow position: chr6:17068635-17068502 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 54, 12

Conread position: 1-131
Cow position: chr6:47799304-47799439 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 109
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 1-138
Cow position: chr6:36011916-36012054 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 133

Conread position: 1-149
Cow position: chr6:8788026-8787873 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 1-169
Cow position: chr6:37395391-37395202 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 1-170
Cow position: chr6:7119608-7119428 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 1-170
Cow position: chr6:38218680-38218844 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 54, 9

Conread position: 1-173
Cow position: chr6:1703815-1703981 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 59, 95

Conread position: 1-173
Cow position: chr6:21535048-21535224 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 54, 137

Conread position: 1-173
Cow position: chr6:56986637-56986464 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 57, 133

Conread position: 1-189
Cow position: chr6:48469011-48469200 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 59, 125

Conread position: 1-195
Cow position: chr6:67281906-67282118 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 59, 22

Conread position: 1-198
Cow position: chr6:41656031-41655816 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 1-198
Cow position: chr6:47885012-47884806 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 160
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 154, 60

Conread position: 1-198
Cow position: chr6:65259476-65259271 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 59, 9

Conread position: 1-212
Cow position: chr6:37463034-37463259 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 169
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 59, 9

Conread position: 1-214
Cow position: chr6:21231535-21231760 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 221

Conread position: 2-126
Cow position: chr6:5114037-5113912 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 2-129
Cow position: chr6:6343438-6343574 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 2-130
Cow position: chr6:10224213-10224336 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 2-130
Cow position: chr6:23401980-23401848 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 58, 0

Conread position: 2-130
Cow position: chr6:37783412-37783545 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 2-130
Cow position: chr6:46330937-46331065 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 118

Conread position: 2-130
Cow position: chr6:47339344-47339211 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 2-130
Cow position: chr6:60667425-60667555 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 45, 96

Conread position: 2-130
Cow position: chr6:64431949-64432083 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 0

Conread position: 2-131
Cow position: chr6:143362-143229 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 2-131
Cow position: chr6:67214761-67214895 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 111
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 58, 0

Conread position: 2-132
Cow position: chr6:44078530-44078661 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 51

Conread position: 2-136
Cow position: chr6:19292814-19292953 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 14

Conread position: 2-165
Cow position: chr6:60740026-60740195 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 2-170
Cow position: chr6:26450326-26450502 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 59, 0

Conread position: 2-170
Cow position: chr6:44623621-44623790 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 122

Conread position: 2-170
Cow position: chr6:45596520-45596344 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 99

Conread position: 2-170
Cow position: chr6:63047605-63047778 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 55, 8

Conread position: 2-197
Cow position: chr6:54490721-54490508 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 58, 93

Conread position: 2-198
Cow position: chr6:37149201-37149421 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 162
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 15

Conread position: 2-204
Cow position: chr6:23532670-23532891 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 167
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 58, 8

Conread position: 2-207
Cow position: chr6:58370770-58370995 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 127, 59

Conread position: 3-170
Cow position: chr6:17090615-17090783 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 16

Conread position: 3-202
Cow position: chr6:28156146-28155930 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 57, 0

Conread position: 4-170
Cow position: chr6:9008598-9008424 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 56, 0

Conread position: 5-130
Cow position: chr6:1429655-1429784 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 104
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 55, 118

Conread position: 5-151
Cow position: chr6:16707030-16707177 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 55, 129

Conread position: 5-170
Cow position: chr6:18988227-18988393 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 57, 154

Conread position: 5-198
Cow position: chr6:40032206-40032419 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 46, 173

Conread position: 5-217
Cow position: chr6:40774317-40774108 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 132

Conread position: 6-170
Cow position: chr6:12338009-12338192 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 9-124
Cow position: chr6:12845399-12845514 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 51, 75

Conread position: 9-129
Cow position: chr6:19013090-19013207 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 9-130
Cow position: chr6:528265-528139 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr6:1103720-1103595 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 107

Conread position: 9-130
Cow position: chr6:15242853-15242981 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 9-130
Cow position: chr6:19131449-19131575 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr6:24781536-24781415 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 56, 93

Conread position: 9-130
Cow position: chr6:38641516-38641637 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 9-130
Cow position: chr6:54573278-54573404 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 9-130
Cow position: chr6:59069605-59069475 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 9-131
Cow position: chr6:28178928-28178809 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 9-141
Cow position: chr6:32268865-32268732 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 105
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 53, 0

Conread position: 9-160
Cow position: chr6:51969096-51969250 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 47, 147

Conread position: 9-170
Cow position: chr6:34196132-34195960 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 132
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 9-170
Cow position: chr6:57287642-57287469 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 14

Conread position: 9-171
Cow position: chr6:38771304-38771474 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 124, 0

Conread position: 9-190
Cow position: chr6:2623800-2623989 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 56, 14

Conread position: 9-195
Cow position: chr6:20196280-20196090 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 154

Conread position: 9-195
Cow position: chr6:61575844-61576041 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 44, 37

Conread position: 9-198
Cow position: chr6:6067683-6067474 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 158
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 51, 0

Conread position: 9-201
Cow position: chr6:15300810-15300598 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 163
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 10-129
Cow position: chr6:43787891-43787767 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 10-130
Cow position: chr6:6060552-6060427 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 10-130
Cow position: chr6:10176282-10176157 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 10-130
Cow position: chr6:21235062-21235188 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 10-130
Cow position: chr6:35993604-35993728 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 109

Conread position: 10-198
Cow position: chr6:16288038-16287828 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 11-126
Cow position: chr6:21110972-21111092 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 11-170
Cow position: chr6:21736864-21736700 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 121, 59

Conread position: 11-195
Cow position: chr6:36470541-36470342 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 11-198
Cow position: chr6:33917819-33917618 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 123

Conread position: 18-204
Cow position: chr6:51933582-51933784 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 100

Conread position: 19-215
Cow position: chr6:16352324-16352118 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 42, 5

Conread position: 23-141
Cow position: chr6:60516658-60516780 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 0

Conread position: 25-155
Cow position: chr6:30825731-30825599 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 28-242
Cow position: chr6:41226792-41226567 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 32, 188

Conread position: 64-204
Cow position: chr6:49581065-49580926 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 118
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 62, 71

Show alignments to all cow chromosomes.