Cow genome map
| Conread name: | Pig1-47E13 | 
| Conread position: | 1-124 | 
| Cow position: | chr6:38614830-38614951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 1-126 | 
| Cow position: | chr6:21061870-21061745 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 55, 61 | 
| Conread position: | 1-129 | 
| Cow position: | chr6:9751043-9750913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 1-129 | 
| Cow position: | chr6:37692762-37692893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 59, 35 | 
| Conread position: | 1-130 | 
| Cow position: | chr6:582261-582128 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 1-130 | 
| Cow position: | chr6:17412547-17412422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 1-130 | 
| Cow position: | chr6:17997308-17997175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 1-130 | 
| Cow position: | chr6:18144202-18144342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 1-130 | 
| Cow position: | chr6:19446265-19446395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 132 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 59, 9 | 
| Conread position: | 1-130 | 
| Cow position: | chr6:19681516-19681380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 1-130 | 
| Cow position: | chr6:33450958-33450831 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 59, 9 | 
| Conread position: | 1-130 | 
| Cow position: | chr6:35990225-35990089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 112 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 1-130 | 
| Cow position: | chr6:37199516-37199393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 68, 0 | 
| Conread position: | 1-130 | 
| Cow position: | chr6:54867528-54867662 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 1-130 | 
| Cow position: | chr6:55535738-55535607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 46, 95 | 
| Conread position: | 1-130 | 
| Cow position: | chr6:67806004-67805870 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 1-131 | 
| Cow position: | chr6:17068635-17068502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 54, 12 | 
| Conread position: | 1-131 | 
| Cow position: | chr6:47799304-47799439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 136 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 1-138 | 
| Cow position: | chr6:36011916-36012054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 61, 133 | 
| Conread position: | 1-149 | 
| Cow position: | chr6:8788026-8787873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 1-169 | 
| Cow position: | chr6:37395391-37395202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 1-170 | 
| Cow position: | chr6:7119608-7119428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 1-170 | 
| Cow position: | chr6:38218680-38218844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 54, 9 | 
| Conread position: | 1-173 | 
| Cow position: | chr6:1703815-1703981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 174 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 59, 95 | 
| Conread position: | 1-173 | 
| Cow position: | chr6:21535048-21535224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 54, 137 | 
| Conread position: | 1-173 | 
| Cow position: | chr6:56986637-56986464 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 57, 133 | 
| Conread position: | 1-189 | 
| Cow position: | chr6:48469011-48469200 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 59, 125 | 
| Conread position: | 1-195 | 
| Cow position: | chr6:67281906-67282118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 59, 22 | 
| Conread position: | 1-198 | 
| Cow position: | chr6:41656031-41655816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 1-198 | 
| Cow position: | chr6:47885012-47884806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 209 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 154, 60 | 
| Conread position: | 1-198 | 
| Cow position: | chr6:65259476-65259271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 59, 9 | 
| Conread position: | 1-212 | 
| Cow position: | chr6:37463034-37463259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 59, 9 | 
| Conread position: | 1-214 | 
| Cow position: | chr6:21231535-21231760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 59, 221 | 
| Conread position: | 2-126 | 
| Cow position: | chr6:5114037-5113912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 2-129 | 
| Cow position: | chr6:6343438-6343574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 137 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 2-130 | 
| Cow position: | chr6:10224213-10224336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 8, 0 | 
| Conread position: | 2-130 | 
| Cow position: | chr6:23401980-23401848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 2-130 | 
| Cow position: | chr6:37783412-37783545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 2-130 | 
| Cow position: | chr6:46330937-46331065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 60, 118 | 
| Conread position: | 2-130 | 
| Cow position: | chr6:47339344-47339211 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 2-130 | 
| Cow position: | chr6:60667425-60667555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 45, 96 | 
| Conread position: | 2-130 | 
| Cow position: | chr6:64431949-64432083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 2-131 | 
| Cow position: | chr6:143362-143229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 2-131 | 
| Cow position: | chr6:67214761-67214895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 135 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 2-132 | 
| Cow position: | chr6:44078530-44078661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 58, 51 | 
| Conread position: | 2-136 | 
| Cow position: | chr6:19292814-19292953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 141 | 
| Alignm identity: | 109 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 58, 14 | 
| Conread position: | 2-165 | 
| Cow position: | chr6:60740026-60740195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 2-170 | 
| Cow position: | chr6:26450326-26450502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 59, 0 | 
| Conread position: | 2-170 | 
| Cow position: | chr6:44623621-44623790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 44, 122 | 
| Conread position: | 2-170 | 
| Cow position: | chr6:45596520-45596344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 45, 99 | 
| Conread position: | 2-170 | 
| Cow position: | chr6:63047605-63047778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 55, 8 | 
| Conread position: | 2-197 | 
| Cow position: | chr6:54490721-54490508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 58, 93 | 
| Conread position: | 2-198 | 
| Cow position: | chr6:37149201-37149421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 23, 15 | 
| Conread position: | 2-204 | 
| Cow position: | chr6:23532670-23532891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 58, 8 | 
| Conread position: | 2-207 | 
| Cow position: | chr6:58370770-58370995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 127, 59 | 
| Conread position: | 3-170 | 
| Cow position: | chr6:17090615-17090783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 57, 16 | 
| Conread position: | 3-202 | 
| Cow position: | chr6:28156146-28155930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 4-170 | 
| Cow position: | chr6:9008598-9008424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 5-130 | 
| Cow position: | chr6:1429655-1429784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 55, 118 | 
| Conread position: | 5-151 | 
| Cow position: | chr6:16707030-16707177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 149 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 55, 129 | 
| Conread position: | 5-170 | 
| Cow position: | chr6:18988227-18988393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 57, 154 | 
| Conread position: | 5-198 | 
| Cow position: | chr6:40032206-40032419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 46, 173 | 
| Conread position: | 5-217 | 
| Cow position: | chr6:40774317-40774108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 55, 132 | 
| Conread position: | 6-170 | 
| Cow position: | chr6:12338009-12338192 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 9-124 | 
| Cow position: | chr6:12845399-12845514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 51, 75 | 
| Conread position: | 9-129 | 
| Cow position: | chr6:19013090-19013207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 9-130 | 
| Cow position: | chr6:528265-528139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 9-130 | 
| Cow position: | chr6:1103720-1103595 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 51, 107 | 
| Conread position: | 9-130 | 
| Cow position: | chr6:15242853-15242981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 129 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 9-130 | 
| Cow position: | chr6:19131449-19131575 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 9-130 | 
| Cow position: | chr6:24781536-24781415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 56, 93 | 
| Conread position: | 9-130 | 
| Cow position: | chr6:38641516-38641637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 9-130 | 
| Cow position: | chr6:54573278-54573404 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 9-130 | 
| Cow position: | chr6:59069605-59069475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 131 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 9-131 | 
| Cow position: | chr6:28178928-28178809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 56, 0 | 
| Conread position: | 9-141 | 
| Cow position: | chr6:32268865-32268732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 53, 0 | 
| Conread position: | 9-160 | 
| Cow position: | chr6:51969096-51969250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 47, 147 | 
| Conread position: | 9-170 | 
| Cow position: | chr6:34196132-34195960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 9-170 | 
| Cow position: | chr6:57287642-57287469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 175 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 48, 14 | 
| Conread position: | 9-171 | 
| Cow position: | chr6:38771304-38771474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 124, 0 | 
| Conread position: | 9-190 | 
| Cow position: | chr6:2623800-2623989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 56, 14 | 
| Conread position: | 9-195 | 
| Cow position: | chr6:20196280-20196090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 53, 154 | 
| Conread position: | 9-195 | 
| Cow position: | chr6:61575844-61576041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 44, 37 | 
| Conread position: | 9-198 | 
| Cow position: | chr6:6067683-6067474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 9-201 | 
| Cow position: | chr6:15300810-15300598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 10-129 | 
| Cow position: | chr6:43787891-43787767 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 10-130 | 
| Cow position: | chr6:6060552-6060427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 10-130 | 
| Cow position: | chr6:10176282-10176157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 10-130 | 
| Cow position: | chr6:21235062-21235188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 10-130 | 
| Cow position: | chr6:35993604-35993728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 102 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 50, 109 | 
| Conread position: | 10-198 | 
| Cow position: | chr6:16288038-16287828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 211 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 11-126 | 
| Cow position: | chr6:21110972-21111092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 11-170 | 
| Cow position: | chr6:21736864-21736700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 121, 59 | 
| Conread position: | 11-195 | 
| Cow position: | chr6:36470541-36470342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 200 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 11-198 | 
| Cow position: | chr6:33917819-33917618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 205 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 46, 123 | 
| Conread position: | 18-204 | 
| Cow position: | chr6:51933582-51933784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 42, 100 | 
| Conread position: | 19-215 | 
| Cow position: | chr6:16352324-16352118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 42, 5 | 
| Conread position: | 23-141 | 
| Cow position: | chr6:60516658-60516780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 37, 0 | 
| Conread position: | 25-155 | 
| Cow position: | chr6:30825731-30825599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 28-242 | 
| Cow position: | chr6:41226792-41226567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 32, 188 | 
| Conread position: | 64-204 | 
| Cow position: | chr6:49581065-49580926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 144 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 62, 71 | 
Show alignments to all cow chromosomes.
