Cow genome map
| Conread name: | Pig1-55B21 | 
| Conread position: | 1-393 | 
| Cow position: | chr3:16157564-16157154 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 89 | 
| Conread position: | 4-295 | 
| Cow position: | chr3:74088291-74088593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 8.00001e-41 | 
| Alignm gaps (pig, cow): | 8, 176 | 
| Conread position: | 4-310 | 
| Cow position: | chr3:27286108-27285783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 9.00054e-42 | 
| Alignm gaps (pig, cow): | 8, 315 | 
| Conread position: | 4-315 | 
| Cow position: | chr3:14263270-14262943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 8, 0 | 
| Conread position: | 4-331 | 
| Cow position: | chr3:20129821-20129480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 259 | 
| Conread position: | 4-331 | 
| Cow position: | chr3:54434850-54434505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 7 | 
| Conread position: | 4-386 | 
| Cow position: | chr3:31419578-31419172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 8, 62 | 
| Conread position: | 4-393 | 
| Cow position: | chr3:49650262-49649851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 20 | 
| Conread position: | 4-393 | 
| Cow position: | chr3:60933295-60932901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 15 | 
| Conread position: | 4-395 | 
| Cow position: | chr3:73764319-73764712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 20 | 
| Conread position: | 5-393 | 
| Cow position: | chr3:14717684-14717277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 8.00001e-41 | 
| Alignm gaps (pig, cow): | 65, 17 | 
| Conread position: | 6-363 | 
| Cow position: | chr3:79902378-79902003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 129, 0 | 
| Conread position: | 6-393 | 
| Cow position: | chr3:18184945-18184544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 340 | 
| Conread position: | 6-395 | 
| Cow position: | chr3:31225329-31224922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 181 | 
| Conread position: | 6-395 | 
| Cow position: | chr3:43528362-43528770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 18 | 
| Conread position: | 7-393 | 
| Cow position: | chr3:48811107-48811517 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 117 | 
| Conread position: | 7-395 | 
| Cow position: | chr3:61278782-61278382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 5, 12 | 
| Conread position: | 8-386 | 
| Cow position: | chr3:3164622-3165015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 168 | 
| Conread position: | 8-393 | 
| Cow position: | chr3:45183975-45184364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 66 | 
| Conread position: | 14-386 | 
| Cow position: | chr3:19711444-19711838 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 94 | 
| Conread position: | 15-288 | 
| Cow position: | chr3:83490949-83490660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 15-363 | 
| Cow position: | chr3:45524129-45523766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 120, 57 | 
| Conread position: | 15-386 | 
| Cow position: | chr3:25690655-25690272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 142 | 
| Conread position: | 15-393 | 
| Cow position: | chr3:72390948-72390556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 7e-40 | 
| Alignm gaps (pig, cow): | 38, 115 | 
| Conread position: | 15-393 | 
| Cow position: | chr3:79592019-79592418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 171 | 
| Conread position: | 18-386 | 
| Cow position: | chr3:80081960-80082340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 28 | 
| Conread position: | 20-386 | 
| Cow position: | chr3:45700688-45700312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 106, 22 | 
| Conread position: | 21-390 | 
| Cow position: | chr3:49218454-49218836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 65 | 
| Conread position: | 22-386 | 
| Cow position: | chr3:2335145-2334762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 140 | 
| Conread position: | 23-350 | 
| Cow position: | chr3:53046801-53047128 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 112, 25 | 
| Conread position: | 23-386 | 
| Cow position: | chr3:77496679-77496295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 355 | 
| Conread position: | 23-392 | 
| Cow position: | chr3:19691467-19691856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 59, 54 | 
| Conread position: | 23-392 | 
| Cow position: | chr3:20378702-20379081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 100, 118 | 
| Conread position: | 23-392 | 
| Cow position: | chr3:40519910-40520301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 65, 54 | 
| Conread position: | 23-393 | 
| Cow position: | chr3:303251-302859 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 37, 68 | 
| Conread position: | 23-393 | 
| Cow position: | chr3:2573558-2573165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 44, 122 | 
| Conread position: | 23-393 | 
| Cow position: | chr3:3595880-3596273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 44, 122 | 
| Conread position: | 23-393 | 
| Cow position: | chr3:6839062-6838670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 47, 122 | 
| Conread position: | 23-393 | 
| Cow position: | chr3:7767944-7767551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 44, 122 | 
| Conread position: | 23-393 | 
| Cow position: | chr3:13361477-13361084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 49, 122 | 
| Conread position: | 23-393 | 
| Cow position: | chr3:14144550-14144943 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 44, 122 | 
| Conread position: | 23-393 | 
| Cow position: | chr3:15233133-15233525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 9e-32 | 
| Alignm gaps (pig, cow): | 44, 83 | 
| Conread position: | 23-393 | 
| Cow position: | chr3:15687663-15688051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 108, 96 | 
| Conread position: | 23-393 | 
| Cow position: | chr3:16226895-16226512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 100, 118 | 
| Conread position: | 23-393 | 
| Cow position: | chr3:18393530-18393919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 137, 46 | 
| Conread position: | 23-393 | 
| Cow position: | chr3:26892521-26892128 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 44, 122 | 
| Conread position: | 23-393 | 
| Cow position: | chr3:28933934-28933541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 44, 122 | 
| Conread position: | 23-393 | 
| Cow position: | chr3:39232742-39232349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 44, 122 | 
| Conread position: | 23-393 | 
| Cow position: | chr3:41057990-41057597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 49, 122 | 
| Conread position: | 23-393 | 
| Cow position: | chr3:41568929-41569322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 44, 122 | 
| Conread position: | 23-393 | 
| Cow position: | chr3:56484224-56484617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 44, 122 | 
| Conread position: | 23-393 | 
| Cow position: | chr3:58913068-58912675 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 44, 122 | 
| Conread position: | 23-393 | 
| Cow position: | chr3:66603372-66603747 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 47, 123 | 
| Conread position: | 23-393 | 
| Cow position: | chr3:74061498-74061105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 49, 122 | 
| Conread position: | 23-393 | 
| Cow position: | chr3:75771109-75771497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 14, 28 | 
| Conread position: | 24-331 | 
| Cow position: | chr3:62999145-62999465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 46, 6 | 
| Conread position: | 24-386 | 
| Cow position: | chr3:42671179-42670801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 24 | 
| Conread position: | 24-393 | 
| Cow position: | chr3:2008122-2007740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 8.00001e-41 | 
| Alignm gaps (pig, cow): | 169, 45 | 
| Conread position: | 24-395 | 
| Cow position: | chr3:33633032-33633409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 111, 11 | 
| Conread position: | 25-277 | 
| Cow position: | chr3:80740424-80740177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 137, 37 | 
| Conread position: | 25-343 | 
| Cow position: | chr3:2674883-2674549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 12 | 
| Conread position: | 25-353 | 
| Cow position: | chr3:30358780-30359121 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 7e-40 | 
| Alignm gaps (pig, cow): | 110, 35 | 
| Conread position: | 25-354 | 
| Cow position: | chr3:39066192-39065843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 40, 339 | 
| Conread position: | 25-354 | 
| Cow position: | chr3:46007978-46007629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 46, 58 | 
| Conread position: | 25-354 | 
| Cow position: | chr3:49327797-49327456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 45, 98 | 
| Conread position: | 25-360 | 
| Cow position: | chr3:16656621-16656963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 42, 84 | 
| Conread position: | 25-360 | 
| Cow position: | chr3:45881765-45881412 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 283 | 
| Conread position: | 25-363 | 
| Cow position: | chr3:2630650-2630301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 83, 44 | 
| Conread position: | 25-363 | 
| Cow position: | chr3:6898203-6897861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 135, 39 | 
| Conread position: | 25-363 | 
| Cow position: | chr3:14446640-14446307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 110, 34 | 
| Conread position: | 25-363 | 
| Cow position: | chr3:36656914-36657273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 0 | 
| Conread position: | 25-363 | 
| Cow position: | chr3:56976136-56976486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 99, 45 | 
| Conread position: | 25-363 | 
| Cow position: | chr3:61678545-61678190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 23 | 
| Conread position: | 25-364 | 
| Cow position: | chr3:52017614-52017259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 35, 120 | 
| Conread position: | 25-380 | 
| Cow position: | chr3:14456049-14456419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 111, 256 | 
| Conread position: | 25-383 | 
| Cow position: | chr3:70565882-70566258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 0 | 
| Conread position: | 25-384 | 
| Cow position: | chr3:61262659-61262300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 169 | 
| Conread position: | 25-385 | 
| Cow position: | chr3:2680372-2680018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 45, 124 | 
| Conread position: | 25-385 | 
| Cow position: | chr3:55272191-55272554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 11 | 
| Conread position: | 25-386 | 
| Cow position: | chr3:2036154-2035776 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 110, 240 | 
| Conread position: | 25-386 | 
| Cow position: | chr3:14626302-14626678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 168, 42 | 
| Conread position: | 25-386 | 
| Cow position: | chr3:17710191-17709816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 7e-40 | 
| Alignm gaps (pig, cow): | 110, 35 | 
| Conread position: | 25-386 | 
| Cow position: | chr3:51033202-51032822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 25-392 | 
| Cow position: | chr3:18245564-18245945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 94, 117 | 
| Conread position: | 25-392 | 
| Cow position: | chr3:77276550-77276931 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 35 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:2506621-2507010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 294 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:2538108-2537727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 38, 117 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:2903434-2903827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 237 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:5536050-5536439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 45, 216 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:6265367-6264975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 9.00054e-42 | 
| Alignm gaps (pig, cow): | 52, 0 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:9843443-9843043 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 38, 332 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:10244688-10244297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:14280699-14280313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 52 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:15052096-15052458 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 39 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:18459666-18460051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 22 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:18887441-18887047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:21302575-21302961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 52 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:26894517-26894140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 53 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:28675845-28675458 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 0 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:29887566-29887949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 50 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:55085327-55085720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 234 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:59865507-59865117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 42, 120 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:60092723-60093107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 51, 121 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:60389491-60389119 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 161, 14 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:61171655-61172018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 191, 27 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:66609987-66610371 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 39 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:73708904-73708524 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 143, 81 | 
| Conread position: | 25-393 | 
| Cow position: | chr3:83201668-83202020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 45, 102 | 
| Conread position: | 25-394 | 
| Cow position: | chr3:81102359-81101973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 51, 257 | 
| Conread position: | 25-395 | 
| Cow position: | chr3:8901275-8900879 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 52 | 
| Conread position: | 25-395 | 
| Cow position: | chr3:62826763-62827142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 199 | 
| Conread position: | 26-382 | 
| Cow position: | chr3:15746600-15746953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 49, 125 | 
| Conread position: | 26-393 | 
| Cow position: | chr3:6689853-6689465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 159 | 
| Conread position: | 27-393 | 
| Cow position: | chr3:23169212-23169600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 295 | 
| Conread position: | 30-316 | 
| Cow position: | chr3:51013989-51014279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 93, 34 | 
| Conread position: | 30-386 | 
| Cow position: | chr3:79208148-79208508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 185 | 
| Conread position: | 32-375 | 
| Cow position: | chr3:10958380-10958721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 151 | 
| Conread position: | 32-386 | 
| Cow position: | chr3:30816183-30815813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 91, 32 | 
| Conread position: | 33-383 | 
| Cow position: | chr3:40205188-40205554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 90, 31 | 
| Conread position: | 33-386 | 
| Cow position: | chr3:50218003-50217634 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 90, 31 | 
| Conread position: | 33-393 | 
| Cow position: | chr3:1438577-1438200 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 9e-32 | 
| Alignm gaps (pig, cow): | 90, 31 | 
| Conread position: | 33-393 | 
| Cow position: | chr3:12981874-12982250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 104, 31 | 
| Conread position: | 33-393 | 
| Cow position: | chr3:12986340-12986716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 104, 31 | 
| Conread position: | 33-393 | 
| Cow position: | chr3:14261447-14261069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 102, 31 | 
| Conread position: | 33-393 | 
| Cow position: | chr3:28472373-28472012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 90, 31 | 
| Conread position: | 33-393 | 
| Cow position: | chr3:36861096-36861469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 90, 31 | 
| Conread position: | 33-393 | 
| Cow position: | chr3:49604433-49604809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 90, 31 | 
| Conread position: | 33-393 | 
| Cow position: | chr3:49975515-49975892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 90, 31 | 
| Conread position: | 34-386 | 
| Cow position: | chr3:7154793-7155161 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-386 | 
| Cow position: | chr3:18907864-18907506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 178, 30 | 
| Conread position: | 34-386 | 
| Cow position: | chr3:48073164-48073535 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 83, 22 | 
| Conread position: | 34-392 | 
| Cow position: | chr3:45946512-45946887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:2833525-2833901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:2922643-2922268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:8331290-8330913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:11418560-11418184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:18874672-18875046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:23598025-23598401 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:27687349-27687725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:28668675-28669051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:30753596-30753220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:32356763-32356388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:32411553-32411929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 101, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:35044173-35043797 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:35341853-35342229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:36417753-36417377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:38748395-38748018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:39920935-39921310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:41396381-41396005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:46261383-46261005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:47720260-47719884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:49287175-49286799 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:51857864-51857488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:52011783-52011407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 101, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:52045006-52045382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr3:68869743-68870117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 101, 9 | 
| Conread position: | 35-352 | 
| Cow position: | chr3:60514097-60514430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 9e-32 | 
| Alignm gaps (pig, cow): | 88, 29 | 
| Conread position: | 35-386 | 
| Cow position: | chr3:8556939-8557304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 100, 38 | 
| Conread position: | 37-393 | 
| Cow position: | chr3:26920740-26920365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 91 | 
| Conread position: | 37-395 | 
| Cow position: | chr3:15658335-15657968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 32, 54 | 
| Conread position: | 38-386 | 
| Cow position: | chr3:35884109-35884476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 26, 55 | 
| Conread position: | 41-389 | 
| Cow position: | chr3:3032235-3031874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 62 | 
| Conread position: | 43-393 | 
| Cow position: | chr3:11254312-11254677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 79 | 
| Conread position: | 44-394 | 
| Cow position: | chr3:79094229-79094597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 130 | 
| Conread position: | 46-393 | 
| Cow position: | chr3:48241456-48241081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 224 | 
| Conread position: | 48-363 | 
| Cow position: | chr3:58060780-58061104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 22, 98 | 
| Conread position: | 48-386 | 
| Cow position: | chr3:77271430-77271800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 48-393 | 
| Cow position: | chr3:26219225-26219591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 271 | 
| Conread position: | 48-393 | 
| Cow position: | chr3:47987466-47987100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 87, 16 | 
| Conread position: | 49-354 | 
| Cow position: | chr3:69486535-69486214 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 86, 15 | 
| Conread position: | 49-363 | 
| Cow position: | chr3:580178-579848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 86, 15 | 
| Conread position: | 49-363 | 
| Cow position: | chr3:35805811-35805481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-384 | 
| Cow position: | chr3:50941014-50941365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-386 | 
| Cow position: | chr3:3618799-3618446 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-386 | 
| Cow position: | chr3:13311004-13311353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 86, 21 | 
| Conread position: | 49-386 | 
| Cow position: | chr3:14889298-14888945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-386 | 
| Cow position: | chr3:20843571-20843924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-386 | 
| Cow position: | chr3:24266196-24265843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 90, 15 | 
| Conread position: | 49-386 | 
| Cow position: | chr3:24442104-24442461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 33, 26 | 
| Conread position: | 49-386 | 
| Cow position: | chr3:30352280-30351929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-386 | 
| Cow position: | chr3:40049884-40049531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-386 | 
| Cow position: | chr3:52487114-52486762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 90, 285 | 
| Conread position: | 49-386 | 
| Cow position: | chr3:53879267-53879620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-386 | 
| Cow position: | chr3:64654633-64654280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-386 | 
| Cow position: | chr3:68716712-68717066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:1035086-1034725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 86, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:2075779-2075418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:6885144-6884783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:7245109-7245471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 85, 11 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:8240757-8240397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 75, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:13248022-13248383 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 75, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:13326334-13326695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:14681080-14680719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 9e-32 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:15417465-15417104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:18051923-18052284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:18863436-18863075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:19882048-19881687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:20796291-20795930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 86, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:21594280-21593919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:22490620-22490260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 86, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:24557577-24557938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:26802079-26801722 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 70, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:28764424-28764785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 70, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:29461186-29461547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:30301988-30301627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:30328671-30329032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:32619012-32619375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:35613141-35612780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 70, 9 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:36122173-36121813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:37150410-37150769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:42277256-42277616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 59, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:42976317-42976677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:43085432-43085093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:43524741-43525102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:44927812-44927451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:45098238-45097877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 86, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:45749253-45748892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:46683831-46683471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 74, 13 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:49610217-49610578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:50960212-50959851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:51520068-51520429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 9e-32 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:51870058-51869697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:53519776-53519417 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 75, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:55837834-55837479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 163, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:59747823-59748184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 88, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:61200788-61200427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:65323004-65323352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:65474426-65474065 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:77188274-77187919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 7e-40 | 
| Alignm gaps (pig, cow): | 113, 94 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:78471993-78472353 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:79669109-79668748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:80741869-80741508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr3:81064422-81064062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 50-393 | 
| Cow position: | chr3:62611746-62611382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 14, 119 | 
| Conread position: | 51-386 | 
| Cow position: | chr3:22089449-22089803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 13, 45 | 
| Conread position: | 51-393 | 
| Cow position: | chr3:20476495-20476136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 72, 13 | 
| Conread position: | 51-393 | 
| Cow position: | chr3:55110014-55110374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 51-393 | 
| Cow position: | chr3:66887190-66887555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 33, 26 | 
| Conread position: | 52-352 | 
| Cow position: | chr3:55058287-55057970 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 52-362 | 
| Cow position: | chr3:37041256-37040941 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 133, 0 | 
| Conread position: | 52-386 | 
| Cow position: | chr3:21178256-21178611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 17, 93 | 
| Conread position: | 52-386 | 
| Cow position: | chr3:23735270-23735625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 52-386 | 
| Cow position: | chr3:24433374-24433022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 52-386 | 
| Cow position: | chr3:73211813-73211474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 83, 195 | 
| Conread position: | 52-392 | 
| Cow position: | chr3:46753843-46753479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 72, 35 | 
| Conread position: | 52-393 | 
| Cow position: | chr3:11385502-11385144 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 83, 245 | 
| Conread position: | 52-393 | 
| Cow position: | chr3:20225985-20225625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 52-393 | 
| Cow position: | chr3:40827683-40827323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 52-393 | 
| Cow position: | chr3:49415854-49416214 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 52-393 | 
| Cow position: | chr3:64216572-64216209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 9e-32 | 
| Alignm gaps (pig, cow): | 64, 94 | 
| Conread position: | 52-393 | 
| Cow position: | chr3:66624184-66623823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 79, 61 | 
| Conread position: | 52-393 | 
| Cow position: | chr3:75037844-75038204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 52-393 | 
| Cow position: | chr3:81374255-81374614 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 84, 0 | 
| Conread position: | 52-395 | 
| Cow position: | chr3:11410274-11410639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 61, 90 | 
| Conread position: | 52-395 | 
| Cow position: | chr3:29282755-29282389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 13, 97 | 
| Conread position: | 52-395 | 
| Cow position: | chr3:66828948-66829315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 30, 23 | 
| Conread position: | 52-395 | 
| Cow position: | chr3:78110939-78110580 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 84, 30 | 
| Conread position: | 53-361 | 
| Cow position: | chr3:48252718-48252397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 73, 47 | 
| Conread position: | 53-386 | 
| Cow position: | chr3:30701152-30700796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 241 | 
| Conread position: | 53-386 | 
| Cow position: | chr3:54960018-54959677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 211 | 
| Conread position: | 53-386 | 
| Cow position: | chr3:83437275-83437625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 82, 22 | 
| Conread position: | 53-391 | 
| Cow position: | chr3:45214808-45215163 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 53-393 | 
| Cow position: | chr3:7566591-7566945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 53-393 | 
| Cow position: | chr3:15388039-15387674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 53-393 | 
| Cow position: | chr3:65085929-65085571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 54-295 | 
| Cow position: | chr3:49119204-49119450 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 77, 161 | 
| Conread position: | 54-363 | 
| Cow position: | chr3:4864690-4865017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 54-386 | 
| Cow position: | chr3:14725124-14724775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 89 | 
| Conread position: | 54-386 | 
| Cow position: | chr3:18917927-18917576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 81, 0 | 
| Conread position: | 54-386 | 
| Cow position: | chr3:22919514-22919165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 83, 10 | 
| Conread position: | 54-386 | 
| Cow position: | chr3:50762951-50762599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 80, 145 | 
| Conread position: | 54-386 | 
| Cow position: | chr3:59691730-59691389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 16 | 
| Conread position: | 54-393 | 
| Cow position: | chr3:3836607-3836970 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 43, 318 | 
| Conread position: | 54-393 | 
| Cow position: | chr3:11333491-11333841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 81, 120 | 
| Conread position: | 54-393 | 
| Cow position: | chr3:11447824-11447474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 81, 120 | 
| Conread position: | 54-393 | 
| Cow position: | chr3:27242696-27243046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 5e-36 | 
| Alignm gaps (pig, cow): | 136, 84 | 
| Conread position: | 54-393 | 
| Cow position: | chr3:30179910-30179552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 118 | 
| Conread position: | 54-393 | 
| Cow position: | chr3:38096894-38096538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 64, 12 | 
| Conread position: | 54-393 | 
| Cow position: | chr3:64294504-64294147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 81, 124 | 
| Conread position: | 54-393 | 
| Cow position: | chr3:84418960-84419314 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 158, 83 | 
| Conread position: | 55-393 | 
| Cow position: | chr3:36670595-36670955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 56-331 | 
| Cow position: | chr3:76155536-76155248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 153, 82 | 
| Conread position: | 56-393 | 
| Cow position: | chr3:76865427-76865069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 9, 87 | 
| Conread position: | 58-386 | 
| Cow position: | chr3:14437998-14438343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 66, 88 | 
| Conread position: | 58-386 | 
| Cow position: | chr3:23203682-23204027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 66, 84 | 
| Conread position: | 58-386 | 
| Cow position: | chr3:63177334-63176985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 112, 80 | 
| Conread position: | 58-393 | 
| Cow position: | chr3:2364268-2364622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 66, 84 | 
| Conread position: | 58-393 | 
| Cow position: | chr3:15954254-15954607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 58-393 | 
| Cow position: | chr3:78023456-78023810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 66, 84 | 
| Conread position: | 59-386 | 
| Cow position: | chr3:20780054-20780403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 41, 99 | 
| Conread position: | 60-354 | 
| Cow position: | chr3:59514932-59514631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 119 | 
| Conread position: | 60-358 | 
| Cow position: | chr3:35299495-35299180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 203 | 
| Conread position: | 61-374 | 
| Cow position: | chr3:17331588-17331257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 61-393 | 
| Cow position: | chr3:54766940-54766591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 47, 64 | 
| Conread position: | 62-327 | 
| Cow position: | chr3:50069596-50069324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 73, 13 | 
| Conread position: | 64-386 | 
| Cow position: | chr3:1760476-1760136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 59, 77 | 
| Conread position: | 64-393 | 
| Cow position: | chr3:20388485-20388833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 59, 77 | 
| Conread position: | 64-393 | 
| Cow position: | chr3:47758694-47758346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 59, 77 | 
| Conread position: | 64-393 | 
| Cow position: | chr3:49930260-49930608 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 59, 77 | 
| Conread position: | 64-393 | 
| Cow position: | chr3:58767097-58766766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 9, 70 | 
| Conread position: | 64-393 | 
| Cow position: | chr3:77472015-77472363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 64-393 | 
| Cow position: | chr3:80444521-80444869 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 60, 79 | 
| Conread position: | 64-393 | 
| Cow position: | chr3:81057541-81057889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 59, 77 | 
| Conread position: | 64-395 | 
| Cow position: | chr3:225915-226257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 148, 79 | 
| Conread position: | 65-387 | 
| Cow position: | chr3:63687947-63688286 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 72, 251 | 
| Conread position: | 70-385 | 
| Cow position: | chr3:62623825-62624156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 65, 83 | 
| Conread position: | 70-393 | 
| Cow position: | chr3:6754663-6754323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 53, 23 | 
| Conread position: | 71-316 | 
| Cow position: | chr3:26832826-26833079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 257 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 122, 69 | 
| Conread position: | 71-393 | 
| Cow position: | chr3:64015192-64015533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 64, 0 | 
| Conread position: | 75-393 | 
| Cow position: | chr3:71231212-71230875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 77-382 | 
| Cow position: | chr3:50123707-50124019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 99, 69 | 
| Conread position: | 77-393 | 
| Cow position: | chr3:43189292-43189629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 341 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 47, 60 | 
| Conread position: | 78-354 | 
| Cow position: | chr3:24872541-24872266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 145, 26 | 
| Conread position: | 84-393 | 
| Cow position: | chr3:19942846-19942520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 122, 0 | 
| Conread position: | 87-393 | 
| Cow position: | chr3:13084579-13084904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 75, 56 | 
| Conread position: | 88-347 | 
| Cow position: | chr3:4319205-4319473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 0 | 
| Conread position: | 94-386 | 
| Cow position: | chr3:58971674-58971380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 41, 116 | 
| Conread position: | 94-392 | 
| Cow position: | chr3:4049997-4049671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 72, 43 | 
| Conread position: | 102-386 | 
| Cow position: | chr3:34556448-34556744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 91, 25 | 
| Conread position: | 106-350 | 
| Cow position: | chr3:8591570-8591827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 106, 69 | 
| Conread position: | 115-385 | 
| Cow position: | chr3:73930638-73930921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 9e-32 | 
| Alignm gaps (pig, cow): | 20, 64 | 
| Conread position: | 117-386 | 
| Cow position: | chr3:15192112-15191830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 126-386 | 
| Cow position: | chr3:51256859-51256584 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 86, 12 | 
| Conread position: | 133-393 | 
| Cow position: | chr3:11123191-11122914 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 133-393 | 
| Cow position: | chr3:12932681-12932404 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 133-393 | 
| Cow position: | chr3:19959509-19959232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 133-393 | 
| Cow position: | chr3:29328019-29328296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 133-393 | 
| Cow position: | chr3:34819474-34819751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 133-393 | 
| Cow position: | chr3:69273810-69273533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 134-346 | 
| Cow position: | chr3:36082069-36082296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 59, 147 | 
| Conread position: | 139-393 | 
| Cow position: | chr3:24343955-24344226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 141-395 | 
| Cow position: | chr3:24572164-24572436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 149-392 | 
| Cow position: | chr3:68583561-68583814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 256 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 22, 161 | 
| Conread position: | 149-393 | 
| Cow position: | chr3:25012030-25011769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 63, 0 | 
| Conread position: | 151-386 | 
| Cow position: | chr3:73459951-73459701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 57, 122 | 
| Conread position: | 171-386 | 
| Cow position: | chr3:29360470-29360683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 9, 35 | 
| Conread position: | 171-391 | 
| Cow position: | chr3:65413594-65413820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 9, 35 | 
| Conread position: | 204-386 | 
| Cow position: | chr3:26993928-26993744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 21, 62 | 
| Conread position: | 204-386 | 
| Cow position: | chr3:61856733-61856551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 204-393 | 
| Cow position: | chr3:12323492-12323303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 135, 21 | 
| Conread position: | 205-343 | 
| Cow position: | chr3:64998482-64998343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 105 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 205-350 | 
| Cow position: | chr3:48242103-48242249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 205-361 | 
| Cow position: | chr3:51506584-51506422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 20, 134 | 
| Conread position: | 205-362 | 
| Cow position: | chr3:66118544-66118702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-363 | 
| Cow position: | chr3:30384906-30384748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 128, 86 | 
| Conread position: | 205-366 | 
| Cow position: | chr3:22716644-22716806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 163 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 205-374 | 
| Cow position: | chr3:26065436-26065267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 20, 79 | 
| Conread position: | 205-379 | 
| Cow position: | chr3:17895473-17895292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 205-383 | 
| Cow position: | chr3:68628042-68628220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 20, 78 | 
| Conread position: | 205-384 | 
| Cow position: | chr3:17937192-17937370 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 20, 92 | 
| Conread position: | 205-384 | 
| Cow position: | chr3:58383621-58383441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 205-385 | 
| Cow position: | chr3:38863502-38863322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 20, 75 | 
| Conread position: | 205-386 | 
| Cow position: | chr3:16890374-16890192 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 20, 113 | 
| Conread position: | 205-386 | 
| Cow position: | chr3:25691389-25691208 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 20, 94 | 
| Conread position: | 205-386 | 
| Cow position: | chr3:26554055-26554251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 205-386 | 
| Cow position: | chr3:39171845-39172034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 205-386 | 
| Cow position: | chr3:42371386-42371568 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-386 | 
| Cow position: | chr3:45668228-45668409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 20, 114 | 
| Conread position: | 205-386 | 
| Cow position: | chr3:56476244-56476061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 20, 99 | 
| Conread position: | 205-386 | 
| Cow position: | chr3:69419257-69419440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 20, 105 | 
| Conread position: | 205-389 | 
| Cow position: | chr3:15057951-15058129 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 18, 61 | 
| Conread position: | 205-392 | 
| Cow position: | chr3:47629911-47630099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 21, 121 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:56733-56920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 21, 74 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:2024827-2024639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 19, 56 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:2525103-2524913 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:2865827-2866017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:3062075-3061885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 21, 152 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:6171299-6171109 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:9639204-9639392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 20, 53 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:9641207-9641017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:18606739-18606550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 18, 128 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:27544675-27544871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 19, 41 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:29573254-29573444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:29596031-29595841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:39970235-39970430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 20, 73 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:40005695-40005505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:41053252-41053062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:42595135-42595330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 20, 166 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:50205400-50205210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:51338349-51338539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:55836257-55836445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 21, 121 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:56704915-56705116 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:67929612-67929805 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 21, 146 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:68156140-68155949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:70074278-70074466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 21, 146 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:70894396-70894212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 20, 126 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:73762809-73762999 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 20, 122 | 
| Conread position: | 205-393 | 
| Cow position: | chr3:78260886-78261076 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-395 | 
| Cow position: | chr3:16333239-16333052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 195 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 20, 97 | 
| Conread position: | 205-395 | 
| Cow position: | chr3:34392463-34392649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 21, 66 | 
| Conread position: | 205-395 | 
| Cow position: | chr3:57743382-57743190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 20, 58 | 
| Conread position: | 205-395 | 
| Cow position: | chr3:58033845-58034033 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 20, 98 | 
| Conread position: | 206-393 | 
| Cow position: | chr3:73936367-73936564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 211-305 | 
| Cow position: | chr3:77005132-77005037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 96 | 
| Alignm identity: | 81 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 211-384 | 
| Cow position: | chr3:20389756-20389935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 211-386 | 
| Cow position: | chr3:3890022-3890199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 211-386 | 
| Cow position: | chr3:50768328-50768152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 211-386 | 
| Cow position: | chr3:73467240-73467059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 211-386 | 
| Cow position: | chr3:74391087-74391263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 211-386 | 
| Cow position: | chr3:80760030-80759854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 211-392 | 
| Cow position: | chr3:76923490-76923671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 14, 31 | 
| Conread position: | 211-393 | 
| Cow position: | chr3:4031569-4031385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 211-393 | 
| Cow position: | chr3:14065004-14065188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 211-393 | 
| Cow position: | chr3:19793865-19794050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 13, 68 | 
| Conread position: | 211-393 | 
| Cow position: | chr3:27784787-27784597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 211-393 | 
| Cow position: | chr3:30908294-30908483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 14, 122 | 
| Conread position: | 211-393 | 
| Cow position: | chr3:33693277-33693089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 14, 6 | 
| Conread position: | 211-393 | 
| Cow position: | chr3:45647308-45647125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 14, 29 | 
| Conread position: | 211-393 | 
| Cow position: | chr3:52418592-52418404 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 9e-21 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 211-393 | 
| Cow position: | chr3:70321300-70321484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 211-393 | 
| Cow position: | chr3:75157538-75157721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 14, 90 | 
| Conread position: | 211-394 | 
| Cow position: | chr3:60892284-60892100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 14, 34 | 
| Conread position: | 212-331 | 
| Cow position: | chr3:51609420-51609300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 212-367 | 
| Cow position: | chr3:23876298-23876142 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 118 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 212-386 | 
| Cow position: | chr3:29507203-29507025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 13, 125 | 
| Conread position: | 212-386 | 
| Cow position: | chr3:54877461-54877286 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 212-393 | 
| Cow position: | chr3:524781-524598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 212-393 | 
| Cow position: | chr3:43825021-43825205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 212-393 | 
| Cow position: | chr3:67624627-67624809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 13, 167 | 
| Conread position: | 212-393 | 
| Cow position: | chr3:72668531-72668714 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 213-393 | 
| Cow position: | chr3:21778958-21779140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 214-393 | 
| Cow position: | chr3:7476081-7476262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 214-393 | 
| Cow position: | chr3:19752917-19753098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 214-393 | 
| Cow position: | chr3:42847162-42846981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 214-395 | 
| Cow position: | chr3:29311964-29311781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 215-393 | 
| Cow position: | chr3:69945327-69945506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 10, 121 | 
| Conread position: | 217-392 | 
| Cow position: | chr3:20519885-20519706 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 8, 0 | 
| Conread position: | 218-393 | 
| Cow position: | chr3:54608199-54608375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 168, 0 | 
| Conread position: | 222-386 | 
| Cow position: | chr3:37628698-37628528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 237-358 | 
| Cow position: | chr3:17461778-17461656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 123 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 96, 0 | 
| Conread position: | 246-394 | 
| Cow position: | chr3:51234718-51234868 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 247-363 | 
| Cow position: | chr3:68586626-68586510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 255-393 | 
| Cow position: | chr3:15153427-15153288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 140 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 131, 0 | 
Show alignments to all cow chromosomes.
