Cow genome map
| Conread name: | Pig1-55B21 | 
| Conread position: | 2-315 | 
| Cow position: | chr6:33302352-33302022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 8.00141e-43 | 
| Alignm gaps (pig, cow): | 10, 69 | 
| Conread position: | 3-361 | 
| Cow position: | chr6:18049091-18049462 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 137, 17 | 
| Conread position: | 3-393 | 
| Cow position: | chr6:19719657-19719252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 411 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 112, 10 | 
| Conread position: | 4-320 | 
| Cow position: | chr6:55688981-55688657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 8, 104 | 
| Conread position: | 4-386 | 
| Cow position: | chr6:12623411-12623011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 17 | 
| Conread position: | 4-386 | 
| Cow position: | chr6:32210689-32211085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 17 | 
| Conread position: | 4-386 | 
| Cow position: | chr6:36470627-36471027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 45 | 
| Conread position: | 4-386 | 
| Cow position: | chr6:47540471-47540064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 25 | 
| Conread position: | 4-386 | 
| Cow position: | chr6:58073987-58073577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 8, 17 | 
| Conread position: | 4-392 | 
| Cow position: | chr6:6201380-6201012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 8, 45 | 
| Conread position: | 4-393 | 
| Cow position: | chr6:53178578-53178169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 14 | 
| Conread position: | 4-393 | 
| Cow position: | chr6:65862631-65862218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 325 | 
| Conread position: | 5-394 | 
| Cow position: | chr6:1770257-1770662 (view UCSC Genome Browser custom track) | 
| Alignm length: | 413 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 13 | 
| Conread position: | 6-363 | 
| Cow position: | chr6:1174561-1174938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 162 | 
| Conread position: | 6-386 | 
| Cow position: | chr6:4468695-4468304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 42 | 
| Conread position: | 6-386 | 
| Cow position: | chr6:35181321-35181704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 129, 17 | 
| Conread position: | 6-393 | 
| Cow position: | chr6:44099023-44098620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 15 | 
| Conread position: | 6-395 | 
| Cow position: | chr6:11637815-11638208 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 8.00141e-43 | 
| Alignm gaps (pig, cow): | 175, 15 | 
| Conread position: | 7-395 | 
| Cow position: | chr6:43039992-43039592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 205, 14 | 
| Conread position: | 15-386 | 
| Cow position: | chr6:65711757-65711367 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 16-310 | 
| Cow position: | chr6:61631681-61631997 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 53, 211 | 
| Conread position: | 16-386 | 
| Cow position: | chr6:1886736-1887107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 119, 62 | 
| Conread position: | 16-393 | 
| Cow position: | chr6:607194-606795 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 287 | 
| Conread position: | 16-393 | 
| Cow position: | chr6:32867278-32867673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 119, 343 | 
| Conread position: | 18-386 | 
| Cow position: | chr6:53345722-53345337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 325 | 
| Conread position: | 20-386 | 
| Cow position: | chr6:34075942-34075566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 165, 57 | 
| Conread position: | 20-386 | 
| Cow position: | chr6:46571041-46570666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 8.00141e-43 | 
| Alignm gaps (pig, cow): | 173, 28 | 
| Conread position: | 20-391 | 
| Cow position: | chr6:66303925-66304304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 178, 16 | 
| Conread position: | 20-395 | 
| Cow position: | chr6:6470847-6471239 (view UCSC Genome Browser custom track) | 
| Alignm length: | 398 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 123 | 
| Conread position: | 21-393 | 
| Cow position: | chr6:18447585-18447981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 31 | 
| Conread position: | 21-393 | 
| Cow position: | chr6:67187609-67187228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 21, 33 | 
| Conread position: | 23-355 | 
| Cow position: | chr6:29485011-29484683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 157, 101 | 
| Conread position: | 23-391 | 
| Cow position: | chr6:42931185-42931562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 193 | 
| Conread position: | 23-393 | 
| Cow position: | chr6:14388651-14389044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 44, 122 | 
| Conread position: | 23-393 | 
| Cow position: | chr6:18418527-18418920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 44, 122 | 
| Conread position: | 23-393 | 
| Cow position: | chr6:26830597-26830209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 22, 42 | 
| Conread position: | 23-393 | 
| Cow position: | chr6:27541636-27541243 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 44, 122 | 
| Conread position: | 23-393 | 
| Cow position: | chr6:37736995-37736602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 44, 122 | 
| Conread position: | 23-393 | 
| Cow position: | chr6:41470992-41470599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 44, 122 | 
| Conread position: | 23-393 | 
| Cow position: | chr6:41822762-41823155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 44, 122 | 
| Conread position: | 23-393 | 
| Cow position: | chr6:43921704-43921318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 100, 19 | 
| Conread position: | 23-393 | 
| Cow position: | chr6:45752008-45751615 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 44, 122 | 
| Conread position: | 23-393 | 
| Cow position: | chr6:51870009-51869619 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 34, 121 | 
| Conread position: | 23-393 | 
| Cow position: | chr6:55721243-55720850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 44, 122 | 
| Conread position: | 23-393 | 
| Cow position: | chr6:56441005-56441398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 47, 123 | 
| Conread position: | 24-363 | 
| Cow position: | chr6:42565608-42565250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 22 | 
| Conread position: | 24-386 | 
| Cow position: | chr6:64431858-64431487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 6 | 
| Conread position: | 24-393 | 
| Cow position: | chr6:28559338-28558969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 167 | 
| Conread position: | 25-268 | 
| Cow position: | chr6:15242755-15242511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 45, 75 | 
| Conread position: | 25-293 | 
| Cow position: | chr6:16491999-16492274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 45, 12 | 
| Conread position: | 25-316 | 
| Cow position: | chr6:49443004-49442716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 110, 39 | 
| Conread position: | 25-324 | 
| Cow position: | chr6:24652269-24652578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 106, 35 | 
| Conread position: | 25-354 | 
| Cow position: | chr6:56843075-56842732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 115, 39 | 
| Conread position: | 25-360 | 
| Cow position: | chr6:60456750-60456398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 12 | 
| Conread position: | 25-361 | 
| Cow position: | chr6:11169624-11169276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 63, 90 | 
| Conread position: | 25-363 | 
| Cow position: | chr6:32916005-32916355 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 43 | 
| Conread position: | 25-364 | 
| Cow position: | chr6:44578477-44578832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 40, 70 | 
| Conread position: | 25-383 | 
| Cow position: | chr6:24031298-24030918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 25-386 | 
| Cow position: | chr6:7801446-7801820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 229 | 
| Conread position: | 25-386 | 
| Cow position: | chr6:13741614-13741238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 99 | 
| Conread position: | 25-386 | 
| Cow position: | chr6:14063742-14064117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 20 | 
| Conread position: | 25-386 | 
| Cow position: | chr6:16700178-16699812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 159 | 
| Conread position: | 25-386 | 
| Cow position: | chr6:16737939-16737561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 0 | 
| Conread position: | 25-386 | 
| Cow position: | chr6:36918256-36918632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 100, 52 | 
| Conread position: | 25-386 | 
| Cow position: | chr6:46667025-46666647 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 45, 78 | 
| Conread position: | 25-387 | 
| Cow position: | chr6:10605608-10605223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 25-393 | 
| Cow position: | chr6:2012938-2012555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 233 | 
| Conread position: | 25-393 | 
| Cow position: | chr6:2607535-2607146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 164 | 
| Conread position: | 25-393 | 
| Cow position: | chr6:5302490-5302867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 110, 28 | 
| Conread position: | 25-393 | 
| Cow position: | chr6:5958100-5958479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 90 | 
| Conread position: | 25-393 | 
| Cow position: | chr6:8209672-8210049 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 39 | 
| Conread position: | 25-393 | 
| Cow position: | chr6:14696452-14696839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 50, 21 | 
| Conread position: | 25-393 | 
| Cow position: | chr6:15046175-15046562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 110, 52 | 
| Conread position: | 25-393 | 
| Cow position: | chr6:18988132-18987754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 23 | 
| Conread position: | 25-393 | 
| Cow position: | chr6:21311835-21312223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 158 | 
| Conread position: | 25-393 | 
| Cow position: | chr6:25358994-25358609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 391 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 83 | 
| Conread position: | 25-393 | 
| Cow position: | chr6:28180050-28180431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 110, 35 | 
| Conread position: | 25-393 | 
| Cow position: | chr6:39358424-39358799 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 39 | 
| Conread position: | 25-393 | 
| Cow position: | chr6:42267780-42267398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 99, 29 | 
| Conread position: | 25-393 | 
| Cow position: | chr6:54647603-54647993 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 58, 52 | 
| Conread position: | 25-393 | 
| Cow position: | chr6:63252004-63252366 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 359, 112 | 
| Conread position: | 25-394 | 
| Cow position: | chr6:33865173-33865561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 39, 81 | 
| Conread position: | 26-352 | 
| Cow position: | chr6:46205928-46205594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 78, 38 | 
| Conread position: | 26-386 | 
| Cow position: | chr6:13367211-13366839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 109, 63 | 
| Conread position: | 26-386 | 
| Cow position: | chr6:36928573-36928191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 45, 157 | 
| Conread position: | 26-386 | 
| Cow position: | chr6:49410773-49411136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 140, 24 | 
| Conread position: | 26-393 | 
| Cow position: | chr6:10332175-10332576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 44, 11 | 
| Conread position: | 26-393 | 
| Cow position: | chr6:47574823-47574467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 199, 112 | 
| Conread position: | 27-386 | 
| Cow position: | chr6:12551187-12550808 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 72 | 
| Conread position: | 27-386 | 
| Cow position: | chr6:45156026-45155663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 108, 187 | 
| Conread position: | 27-393 | 
| Cow position: | chr6:18961599-18961988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 45, 0 | 
| Conread position: | 27-393 | 
| Cow position: | chr6:23695911-23695530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 30 | 
| Conread position: | 29-386 | 
| Cow position: | chr6:8637190-8636816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 254 | 
| Conread position: | 30-384 | 
| Cow position: | chr6:18955120-18955491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 105, 12 | 
| Conread position: | 32-386 | 
| Cow position: | chr6:61548667-61549037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 91, 32 | 
| Conread position: | 33-386 | 
| Cow position: | chr6:2389618-2389987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 90, 31 | 
| Conread position: | 33-386 | 
| Cow position: | chr6:53271713-53271344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 90, 31 | 
| Conread position: | 33-392 | 
| Cow position: | chr6:16593986-16593628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 102, 8 | 
| Conread position: | 33-393 | 
| Cow position: | chr6:2898821-2898444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 90, 31 | 
| Conread position: | 33-393 | 
| Cow position: | chr6:9321343-9320962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 33-393 | 
| Cow position: | chr6:11402378-11402002 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 90, 31 | 
| Conread position: | 33-393 | 
| Cow position: | chr6:18502755-18503132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 90, 31 | 
| Conread position: | 33-393 | 
| Cow position: | chr6:19515909-19515532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 102, 31 | 
| Conread position: | 33-393 | 
| Cow position: | chr6:20580720-20581097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 90, 31 | 
| Conread position: | 33-393 | 
| Cow position: | chr6:21857794-21857418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 90, 31 | 
| Conread position: | 33-393 | 
| Cow position: | chr6:25376318-25375940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 91, 31 | 
| Conread position: | 33-393 | 
| Cow position: | chr6:27173900-27173523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 90, 31 | 
| Conread position: | 33-393 | 
| Cow position: | chr6:28293766-28294143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 90, 31 | 
| Conread position: | 33-393 | 
| Cow position: | chr6:33884024-33884401 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 90, 31 | 
| Conread position: | 33-393 | 
| Cow position: | chr6:40279111-40278734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 90, 31 | 
| Conread position: | 33-393 | 
| Cow position: | chr6:45592208-45591827 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 90, 31 | 
| Conread position: | 33-393 | 
| Cow position: | chr6:59052477-59052100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 90, 31 | 
| Conread position: | 33-393 | 
| Cow position: | chr6:65863383-65863006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 90, 31 | 
| Conread position: | 33-395 | 
| Cow position: | chr6:6181667-6182047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 91, 8 | 
| Conread position: | 34-363 | 
| Cow position: | chr6:63178178-63177833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-386 | 
| Cow position: | chr6:33489177-33489544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-386 | 
| Cow position: | chr6:38916981-38917349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-387 | 
| Cow position: | chr6:10865998-10865629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-392 | 
| Cow position: | chr6:45976557-45976182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr6:2196746-2196366 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr6:13531722-13531346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr6:16645929-16645553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr6:18474027-18474375 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr6:20174440-20174064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr6:21164361-21163985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr6:22736652-22737024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr6:23567550-23567926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 89, 29 | 
| Conread position: | 34-393 | 
| Cow position: | chr6:25207494-25207118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 89, 24 | 
| Conread position: | 34-393 | 
| Cow position: | chr6:27152733-27152357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr6:34016665-34017042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 89, 24 | 
| Conread position: | 34-393 | 
| Cow position: | chr6:37217676-37217321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 101, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr6:41158263-41158639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr6:41835358-41834982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr6:45765063-45765439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr6:45900935-45901311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr6:45938337-45937961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 85, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr6:52482403-52482027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr6:56888461-56888094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 178, 30 | 
| Conread position: | 34-393 | 
| Cow position: | chr6:61051065-61051441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 89, 30 | 
| Conread position: | 38-361 | 
| Cow position: | chr6:48169853-48169510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 19, 46 | 
| Conread position: | 38-386 | 
| Cow position: | chr6:60673455-60673090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 31, 112 | 
| Conread position: | 41-393 | 
| Cow position: | chr6:56502212-56501845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 306 | 
| Conread position: | 49-363 | 
| Cow position: | chr6:46948855-46948525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 86, 15 | 
| Conread position: | 49-363 | 
| Cow position: | chr6:67818307-67818637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-385 | 
| Cow position: | chr6:6596475-6596126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 113, 0 | 
| Conread position: | 49-386 | 
| Cow position: | chr6:76399-76751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 86, 15 | 
| Conread position: | 49-386 | 
| Cow position: | chr6:1797668-1797315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-386 | 
| Cow position: | chr6:19569894-19570241 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 81, 15 | 
| Conread position: | 49-386 | 
| Cow position: | chr6:20552205-20552563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 22, 97 | 
| Conread position: | 49-386 | 
| Cow position: | chr6:28184278-28184631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-386 | 
| Cow position: | chr6:56079876-56080227 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 75, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:2090301-2089940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 86, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:2867417-2867778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:3153256-3152894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 74, 9 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:7137300-7137660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:7449538-7449177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:7466608-7466969 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:9235555-9235194 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 62, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:10013840-10013479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:10612760-10612389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 259 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 79, 28 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:11020701-11020340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:11452824-11453185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:16417648-16418009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 75, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:17631726-17632088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:18803017-18803377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:18911691-18912052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 90, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:19819487-19819126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:21712749-21712388 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:22042970-22043328 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 86, 17 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:23879016-23879377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:26666981-26667343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 366 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:27093545-27093905 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:27525957-27526323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:28000355-28000714 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:28700522-28700883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 66, 9 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:36258997-36258636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 86, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:36902053-36901692 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:38061654-38061294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:40250762-40251121 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 90, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:43050051-43049693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 163, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:43394566-43394216 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 28 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:43955595-43955234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:46465723-46465361 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 8.00141e-43 | 
| Alignm gaps (pig, cow): | 89, 336 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:49580140-49579779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:54886572-54886933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:55239733-55239372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:55388779-55388419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:57309264-57308903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 75, 15 | 
| Conread position: | 49-393 | 
| Cow position: | chr6:63040292-63040653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-394 | 
| Cow position: | chr6:6568199-6568553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 49-395 | 
| Cow position: | chr6:9226559-9226198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 74, 15 | 
| Conread position: | 51-363 | 
| Cow position: | chr6:8599682-8599351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 84, 24 | 
| Conread position: | 51-386 | 
| Cow position: | chr6:65871794-65871453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 13, 104 | 
| Conread position: | 51-391 | 
| Cow position: | chr6:53740333-53739975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 37, 13 | 
| Conread position: | 51-393 | 
| Cow position: | chr6:48872316-48872674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 73, 13 | 
| Conread position: | 51-393 | 
| Cow position: | chr6:49794999-49794640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 72, 13 | 
| Conread position: | 51-393 | 
| Cow position: | chr6:51296326-51296668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 73, 91 | 
| Conread position: | 52-350 | 
| Cow position: | chr6:43789333-43789644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 25, 91 | 
| Conread position: | 52-352 | 
| Cow position: | chr6:58748102-58747785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 72, 90 | 
| Conread position: | 52-386 | 
| Cow position: | chr6:8206228-8205877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 72, 43 | 
| Conread position: | 52-386 | 
| Cow position: | chr6:10266090-10266445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 30, 23 | 
| Conread position: | 52-386 | 
| Cow position: | chr6:25789695-25790048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 52-386 | 
| Cow position: | chr6:28111800-28112148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 160, 86 | 
| Conread position: | 52-386 | 
| Cow position: | chr6:33509473-33509125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 88, 238 | 
| Conread position: | 52-386 | 
| Cow position: | chr6:45665894-45666250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 18, 62 | 
| Conread position: | 52-393 | 
| Cow position: | chr6:181501-181860 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 52-393 | 
| Cow position: | chr6:707036-706676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 52-393 | 
| Cow position: | chr6:6614326-6613973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 22, 107 | 
| Conread position: | 52-393 | 
| Cow position: | chr6:8753417-8753776 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 83, 216 | 
| Conread position: | 52-393 | 
| Cow position: | chr6:9737219-9737582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 20, 268 | 
| Conread position: | 52-393 | 
| Cow position: | chr6:17865432-17865073 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 11, 113 | 
| Conread position: | 52-393 | 
| Cow position: | chr6:20451995-20451638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 160, 72 | 
| Conread position: | 52-393 | 
| Cow position: | chr6:38872488-38872846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 52-393 | 
| Cow position: | chr6:46391584-46391227 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 81, 76 | 
| Conread position: | 52-393 | 
| Cow position: | chr6:47039191-47039529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 161, 70 | 
| Conread position: | 52-393 | 
| Cow position: | chr6:51718597-51718237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 52-393 | 
| Cow position: | chr6:60877337-60876977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 72, 90 | 
| Conread position: | 52-393 | 
| Cow position: | chr6:64721181-64720829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 160, 64 | 
| Conread position: | 52-395 | 
| Cow position: | chr6:2185461-2185822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 79, 67 | 
| Conread position: | 52-395 | 
| Cow position: | chr6:67544400-67544762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 83, 0 | 
| Conread position: | 53-316 | 
| Cow position: | chr6:43345569-43345844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 82, 100 | 
| Conread position: | 53-363 | 
| Cow position: | chr6:17414561-17414890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 87, 30 | 
| Conread position: | 54-316 | 
| Cow position: | chr6:68272238-68272511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 71, 90 | 
| Conread position: | 54-361 | 
| Cow position: | chr6:46634142-46633826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 70, 101 | 
| Conread position: | 54-386 | 
| Cow position: | chr6:4389739-4389402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 131, 28 | 
| Conread position: | 54-386 | 
| Cow position: | chr6:28343539-28343191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 81, 28 | 
| Conread position: | 54-386 | 
| Cow position: | chr6:66235367-66235029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 57, 87 | 
| Conread position: | 54-393 | 
| Cow position: | chr6:3444787-3445132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 3e-35 | 
| Alignm gaps (pig, cow): | 158, 10 | 
| Conread position: | 54-393 | 
| Cow position: | chr6:15937964-15938312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 81, 9 | 
| Conread position: | 54-393 | 
| Cow position: | chr6:25822114-25822466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 5e-39 | 
| Alignm gaps (pig, cow): | 82, 0 | 
| Conread position: | 54-393 | 
| Cow position: | chr6:55040326-55040685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 70, 90 | 
| Conread position: | 54-395 | 
| Cow position: | chr6:1783882-1784235 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 58 | 
| Conread position: | 54-395 | 
| Cow position: | chr6:16411085-16410734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 81, 223 | 
| Conread position: | 55-393 | 
| Cow position: | chr6:16765502-16765859 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 17, 328 | 
| Conread position: | 56-387 | 
| Cow position: | chr6:42106165-42106506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 79, 66 | 
| Conread position: | 56-393 | 
| Cow position: | chr6:31548541-31548897 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 9e-34 | 
| Alignm gaps (pig, cow): | 68, 87 | 
| Conread position: | 58-382 | 
| Cow position: | chr6:2668421-2668764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 58-386 | 
| Cow position: | chr6:65016004-65016349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 75, 205 | 
| Conread position: | 59-386 | 
| Cow position: | chr6:39093629-39093306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 61, 89 | 
| Conread position: | 59-393 | 
| Cow position: | chr6:60516615-60516262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 72, 228 | 
| Conread position: | 60-361 | 
| Cow position: | chr6:7130987-7131282 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 73, 154 | 
| Conread position: | 60-362 | 
| Cow position: | chr6:32268986-32269288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 25, 53 | 
| Conread position: | 60-393 | 
| Cow position: | chr6:17050406-17050052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 60-395 | 
| Cow position: | chr6:9732950-9733301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 23 | 
| Conread position: | 64-364 | 
| Cow position: | chr6:19171165-19170846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 71, 0 | 
| Conread position: | 64-393 | 
| Cow position: | chr6:6557901-6557553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 59, 77 | 
| Conread position: | 64-393 | 
| Cow position: | chr6:11032313-11032661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 59, 77 | 
| Conread position: | 64-393 | 
| Cow position: | chr6:25363581-25363233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 59, 77 | 
| Conread position: | 64-393 | 
| Cow position: | chr6:30708167-30708515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 59, 77 | 
| Conread position: | 64-393 | 
| Cow position: | chr6:55361986-55361638 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 59, 77 | 
| Conread position: | 70-387 | 
| Cow position: | chr6:27870648-27870293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 55, 196 | 
| Conread position: | 70-393 | 
| Cow position: | chr6:25374084-25374426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 53, 71 | 
| Conread position: | 75-386 | 
| Cow position: | chr6:58390005-58390334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 48, 66 | 
| Conread position: | 75-393 | 
| Cow position: | chr6:27240112-27240431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 109 | 
| Conread position: | 77-386 | 
| Cow position: | chr6:7009584-7009285 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 50, 70 | 
| Conread position: | 78-392 | 
| Cow position: | chr6:33460954-33460625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 46, 0 | 
| Conread position: | 78-393 | 
| Cow position: | chr6:42421127-42420800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 131, 62 | 
| Conread position: | 85-363 | 
| Cow position: | chr6:20245943-20245647 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 88-393 | 
| Cow position: | chr6:33451822-33451503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 47, 7 | 
| Conread position: | 88-393 | 
| Cow position: | chr6:50973300-50973622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 37, 84 | 
| Conread position: | 91-354 | 
| Cow position: | chr6:38233836-38233565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 49, 77 | 
| Conread position: | 91-393 | 
| Cow position: | chr6:58370430-58370099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 44, 0 | 
| Conread position: | 94-384 | 
| Cow position: | chr6:27887907-27887613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 6.99949e-42 | 
| Alignm gaps (pig, cow): | 41, 116 | 
| Conread position: | 96-393 | 
| Cow position: | chr6:55763235-55762922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 4e-37 | 
| Alignm gaps (pig, cow): | 113, 44 | 
| Conread position: | 100-392 | 
| Cow position: | chr6:21590561-21590260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 35, 75 | 
| Conread position: | 107-386 | 
| Cow position: | chr6:7835857-7835570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 23, 19 | 
| Conread position: | 115-393 | 
| Cow position: | chr6:63094636-63094339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 128-395 | 
| Cow position: | chr6:15310051-15310333 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 84, 10 | 
| Conread position: | 133-363 | 
| Cow position: | chr6:63714331-63714576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 79, 48 | 
| Conread position: | 133-393 | 
| Cow position: | chr6:11185383-11185106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 133-393 | 
| Cow position: | chr6:13597210-13597487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 133-393 | 
| Cow position: | chr6:19707388-19707111 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 133-393 | 
| Cow position: | chr6:24757539-24757816 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 133-393 | 
| Cow position: | chr6:26771162-26771440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 42, 0 | 
| Conread position: | 133-393 | 
| Cow position: | chr6:39080876-39080599 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 42, 52 | 
| Conread position: | 133-393 | 
| Cow position: | chr6:49963204-49963481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 133-393 | 
| Cow position: | chr6:50755832-50755555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 133-393 | 
| Cow position: | chr6:59076752-59077030 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 134-393 | 
| Cow position: | chr6:20268485-20268211 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 78, 160 | 
| Conread position: | 139-326 | 
| Cow position: | chr6:31927850-31927650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 139-388 | 
| Cow position: | chr6:10706104-10706371 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 69, 206 | 
| Conread position: | 140-393 | 
| Cow position: | chr6:46246304-46246563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 262 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 54, 7 | 
| Conread position: | 140-393 | 
| Cow position: | chr6:49445070-49444801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 146-393 | 
| Cow position: | chr6:44598105-44598369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 66, 0 | 
| Conread position: | 153-393 | 
| Cow position: | chr6:60380087-60379845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 170-331 | 
| Cow position: | chr6:43788751-43788921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 42, 146 | 
| Conread position: | 204-363 | 
| Cow position: | chr6:3484533-3484693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 162 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 21, 150 | 
| Conread position: | 205-320 | 
| Cow position: | chr6:45690887-45691003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 205-328 | 
| Cow position: | chr6:49685281-49685157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 205-331 | 
| Cow position: | chr6:15943972-15944105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 134 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 205-331 | 
| Cow position: | chr6:49694157-49694034 (view UCSC Genome Browser custom track) | 
| Alignm length: | 128 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 20, 46 | 
| Conread position: | 205-341 | 
| Cow position: | chr6:40774648-40774784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 20, 101 | 
| Conread position: | 205-354 | 
| Cow position: | chr6:12629736-12629591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 20, 54 | 
| Conread position: | 205-361 | 
| Cow position: | chr6:28977325-28977484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 205-361 | 
| Cow position: | chr6:53140671-53140829 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 205-362 | 
| Cow position: | chr6:143636-143794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 119 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 21, 150 | 
| Conread position: | 205-363 | 
| Cow position: | chr6:19695264-19695105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 205-384 | 
| Cow position: | chr6:38440691-38440505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 205-385 | 
| Cow position: | chr6:21396346-21396527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 205-386 | 
| Cow position: | chr6:19045060-19044880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 21, 32 | 
| Conread position: | 205-386 | 
| Cow position: | chr6:23248384-23248568 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 205-386 | 
| Cow position: | chr6:26914820-26914639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 18, 126 | 
| Conread position: | 205-386 | 
| Cow position: | chr6:39330660-39330842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-386 | 
| Cow position: | chr6:50114568-50114386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 20, 149 | 
| Conread position: | 205-386 | 
| Cow position: | chr6:52697488-52697306 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 125 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 205-386 | 
| Cow position: | chr6:59296506-59296325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 21, 61 | 
| Conread position: | 205-391 | 
| Cow position: | chr6:28136610-28136423 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-392 | 
| Cow position: | chr6:23532324-23532129 (view UCSC Genome Browser custom track) | 
| Alignm length: | 196 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:327491-327681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:6459981-6459791 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:10695581-10695392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 21, 28 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:14929316-14929126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:28675400-28675210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:29299088-29298898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:32665302-32665112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:40139425-40139613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 20, 61 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:41494966-41495156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:42131099-42131295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:44130981-44131171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:47640775-47640968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 18, 67 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:47988783-47988593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 20, 98 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:51386132-51385934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 31, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:52478720-52478911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 8e-32 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:53918006-53918196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:53933127-53933315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 20, 61 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:55041150-55040960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:55170335-55170152 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 20, 114 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:55289298-55289488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:56556740-56556930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:59620363-59620172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 205-393 | 
| Cow position: | chr6:61136890-61136698 (view UCSC Genome Browser custom track) | 
| Alignm length: | 194 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 8e-33 | 
| Alignm gaps (pig, cow): | 20, 97 | 
| Conread position: | 205-395 | 
| Cow position: | chr6:1637085-1637277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 205-395 | 
| Cow position: | chr6:20515447-20515255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 205-395 | 
| Cow position: | chr6:50983905-50983713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 206-393 | 
| Cow position: | chr6:65898300-65898488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 19, 77 | 
| Conread position: | 209-386 | 
| Cow position: | chr6:15182605-15182428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 179 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 16, 57 | 
| Conread position: | 211-331 | 
| Cow position: | chr6:51581677-51581800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 211-353 | 
| Cow position: | chr6:66874044-66873901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 14, 89 | 
| Conread position: | 211-386 | 
| Cow position: | chr6:9322856-9322682 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 14, 155 | 
| Conread position: | 211-386 | 
| Cow position: | chr6:26697199-26697374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 211-386 | 
| Cow position: | chr6:53461308-53461481 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 14, 59 | 
| Conread position: | 211-386 | 
| Cow position: | chr6:68048966-68048791 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 14, 35 | 
| Conread position: | 211-393 | 
| Cow position: | chr6:6067972-6068155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 14, 111 | 
| Conread position: | 211-393 | 
| Cow position: | chr6:25773761-25773942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 14, 111 | 
| Conread position: | 211-395 | 
| Cow position: | chr6:6038388-6038579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 14, 128 | 
| Conread position: | 212-361 | 
| Cow position: | chr6:67304496-67304346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 151 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 212-393 | 
| Cow position: | chr6:34475893-34476074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 11, 88 | 
| Conread position: | 212-393 | 
| Cow position: | chr6:38896157-38896340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 131 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 13, 57 | 
| Conread position: | 212-393 | 
| Cow position: | chr6:67950644-67950463 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 11, 85 | 
| Conread position: | 212-394 | 
| Cow position: | chr6:14949795-14949979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 213-386 | 
| Cow position: | chr6:16103534-16103710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 177 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 213-395 | 
| Cow position: | chr6:19060137-19059953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 214-393 | 
| Cow position: | chr6:21541792-21541606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 188 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 11, 147 | 
| Conread position: | 215-393 | 
| Cow position: | chr6:451402-451582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 181 | 
| Alignm identity: | 126 | 
| Alignm E-value: | 9e-23 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 215-393 | 
| Cow position: | chr6:54865483-54865661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 130 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 8, 85 | 
| Conread position: | 216-393 | 
| Cow position: | chr6:642882-643061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 180 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 216-393 | 
| Cow position: | chr6:36830905-36830714 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 219-393 | 
| Cow position: | chr6:65905155-65904979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 5, 114 | 
| Conread position: | 222-392 | 
| Cow position: | chr6:45160681-45160851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 164, 110 | 
| Conread position: | 222-393 | 
| Cow position: | chr6:39897209-39897381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 173 | 
| Alignm identity: | 120 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 164, 0 | 
| Conread position: | 223-393 | 
| Cow position: | chr6:36892565-36892394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 163, 0 | 
Show alignments to all cow chromosomes.
