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Cow genome map

           
Conread name:
           
Pig1-57C11
        

               
Conread position:
               
2-151
               

               
Cow position:
               
chr10:42628493-42628347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
25, 56
               

               
Conread position:
               
2-195
               

               
Cow position:
               
chr10:25359224-25359031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
26, 167
               

               
Conread position:
               
2-196
               

               
Cow position:
               
chr10:34685720-34685524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
24, 48
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr10:19715221-19715465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
26, 124
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr10:38538669-38538911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr10:39041480-39041726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr10:57990139-57990384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr10:38345538-38345785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr10:37769647-37769397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
27, 159
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr10:62409027-62409280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr10:38546398-38546644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 93
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr10:280795-281053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
26, 158
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr10:4192387-4192646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
26, 167
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr10:39817525-39817777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
26, 74
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr10:41876743-41876490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
27, 114
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr10:47906605-47906349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
26, 164
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr10:55092935-55092681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
26, 180
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr10:62216431-62216187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
24, 57
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr10:41566935-41566658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
26, 160
               

               
Conread position:
               
2-273
               

               
Cow position:
               
chr10:14803659-14803375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
26, 69
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr10:22101066-22100787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr10:7282858-7283151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
27, 159
               

               
Conread position:
               
2-308
               

               
Cow position:
               
chr10:1375361-1375044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 154
               

               
Conread position:
               
3-152
               

               
Cow position:
               
chr10:61297154-61297005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
28, 89
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chr10:29633035-29633215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 89
               

               
Conread position:
               
3-196
               

               
Cow position:
               
chr10:58596328-58596134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 183
               

               
Conread position:
               
3-213
               

               
Cow position:
               
chr10:10581497-10581285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 159
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr10:21486740-21486498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
25, 158
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr10:29846786-29847032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
25, 165
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr10:37060754-37060509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
25, 158
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr10:276417-276185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr10:11685840-11686088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
25, 45
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr10:21467079-21466822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
25, 165
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr10:21740925-21741182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
25, 139
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr10:57559727-57559980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
111, 25
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr10:25498179-25497936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
23, 41
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr10:29696065-29695827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
23, 45
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr10:62778167-62777926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
23, 159
               

               
Conread position:
               
8-190
               

               
Cow position:
               
chr10:15862479-15862656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
25, 89
               

               
Conread position:
               
8-226
               

               
Cow position:
               
chr10:24299033-24299257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
18, 31
               

               
Conread position:
               
8-256
               

               
Cow position:
               
chr10:60489485-60489232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
10-228
               

               
Cow position:
               
chr10:19143522-19143750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
18, 43
               

               
Conread position:
               
10-244
               

               
Cow position:
               
chr10:19511424-19511185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
18, 151
               

               
Conread position:
               
10-248
               

               
Cow position:
               
chr10:32578120-32577869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr10:21400855-21401098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
104, 18
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr10:39179600-39179360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
18, 39
               

               
Conread position:
               
11-249
               

               
Cow position:
               
chr10:51952786-51953035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 157
               

               
Conread position:
               
11-249
               

               
Cow position:
               
chr10:54127275-54127042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 28
               

               
Conread position:
               
12-237
               

               
Cow position:
               
chr10:8289785-8289548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
16, 149
               

               
Conread position:
               
40-241
               

               
Cow position:
               
chr10:41157242-41157031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
72, 119
               

               
Conread position:
               
40-289
               

               
Cow position:
               
chr10:124105-123847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
19, 119
               

               
Conread position:
               
44-212
               

               
Cow position:
               
chr10:2123329-2123498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
67, 124
               

               
Conread position:
               
44-235
               

               
Cow position:
               
chr10:1938059-1938239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 116
               

               
Conread position:
               
46-192
               

               
Cow position:
               
chr10:46191170-46191019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
47-216
               

               
Cow position:
               
chr10:31523628-31523467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
49-237
               

               
Cow position:
               
chr10:32650518-32650320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
62, 111
               

               
Conread position:
               
52-262
               

               
Cow position:
               
chr10:42736281-42736065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
158-257
               

               
Cow position:
               
chr10:61296973-61296872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
102
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
209-499
               

               
Cow position:
               
chr10:35090284-35089991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
29, 53
               

               
Conread position:
               
215-534
               

               
Cow position:
               
chr10:6384751-6384443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
22, 48
               

               
Conread position:
               
226-421
               

               
Cow position:
               
chr10:58650982-58651167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
227-532
               

               
Cow position:
               
chr10:11081185-11080873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
237-462
               

               
Cow position:
               
chr10:27136482-27136706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
124, 27
               

               
Conread position:
               
237-532
               

               
Cow position:
               
chr10:7817325-7817017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
19, 47
               

               
Conread position:
               
239-534
               

               
Cow position:
               
chr10:14947457-14947169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
27, 114
               

               
Conread position:
               
240-522
               

               
Cow position:
               
chr10:16598896-16598604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
26, 146
               

               
Conread position:
               
244-488
               

               
Cow position:
               
chr10:23310827-23311074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
26, 7
               

               
Conread position:
               
245-534
               

               
Cow position:
               
chr10:57059076-57059373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
6, 144
               

               
Conread position:
               
246-532
               

               
Cow position:
               
chr10:22888620-22888904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
6, 28
               

               
Conread position:
               
246-534
               

               
Cow position:
               
chr10:45371253-45370964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
213, 183
               

               
Conread position:
               
248-458
               

               
Cow position:
               
chr10:19679303-19679083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
249-442
               

               
Cow position:
               
chr10:57095012-57095199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
249-480
               

               
Cow position:
               
chr10:38205524-38205749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
211, 92
               

               
Conread position:
               
249-504
               

               
Cow position:
               
chr10:4711790-4711535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
102, 14
               

               
Conread position:
               
249-534
               

               
Cow position:
               
chr10:56733221-56732944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
102, 53
               

               
Conread position:
               
250-427
               

               
Cow position:
               
chr10:21348804-21348971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
250-459
               

               
Cow position:
               
chr10:24971141-24971342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
250-532
               

               
Cow position:
               
chr10:10148838-10148566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
210, 13
               

               
Conread position:
               
250-532
               

               
Cow position:
               
chr10:33215987-33215712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 69
               

               
Conread position:
               
250-532
               

               
Cow position:
               
chr10:62353647-62353375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
116, 15
               

               
Conread position:
               
251-416
               

               
Cow position:
               
chr10:33694560-33694402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 91
               

               
Conread position:
               
251-432
               

               
Cow position:
               
chr10:61039309-61039130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
152, 14
               

               
Conread position:
               
251-457
               

               
Cow position:
               
chr10:55069397-55069195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
251-458
               

               
Cow position:
               
chr10:34903664-34903464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
251-458
               

               
Cow position:
               
chr10:46799327-46799127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
251-496
               

               
Cow position:
               
chr10:34661142-34661379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
76, 14
               

               
Conread position:
               
251-531
               

               
Cow position:
               
chr10:37818366-37818644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
75, 20
               

               
Conread position:
               
251-532
               

               
Cow position:
               
chr10:10750066-10750341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
83, 37
               

               
Conread position:
               
251-532
               

               
Cow position:
               
chr10:34646266-34646537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
209, 20
               

               
Conread position:
               
251-532
               

               
Cow position:
               
chr10:59572083-59571813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
209, 83
               

               
Conread position:
               
251-532
               

               
Cow position:
               
chr10:61509757-61510029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 20
               

               
Conread position:
               
251-534
               

               
Cow position:
               
chr10:9675288-9675550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
251-534
               

               
Cow position:
               
chr10:60491073-60491349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
252-458
               

               
Cow position:
               
chr10:40999049-40998841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
21, 102
               

               
Conread position:
               
252-460
               

               
Cow position:
               
chr10:6719167-6718957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
101, 132
               

               
Conread position:
               
252-480
               

               
Cow position:
               
chr10:10027764-10027536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
104, 133
               

               
Conread position:
               
252-484
               

               
Cow position:
               
chr10:5784065-5784291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
99, 14
               

               
Conread position:
               
252-488
               

               
Cow position:
               
chr10:38995424-38995182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
90, 19
               

               
Conread position:
               
252-494
               

               
Cow position:
               
chr10:37425952-37426187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
208, 11
               

               
Conread position:
               
252-518
               

               
Cow position:
               
chr10:6490067-6489795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
99, 13
               

               
Conread position:
               
252-530
               

               
Cow position:
               
chr10:23346118-23346390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
208, 14
               

               
Conread position:
               
252-532
               

               
Cow position:
               
chr10:15817609-15817881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
204, 19
               

               
Conread position:
               
252-532
               

               
Cow position:
               
chr10:61921954-61922229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
210, 19
               

               
Conread position:
               
252-534
               

               
Cow position:
               
chr10:1978482-1978759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 100
               

               
Conread position:
               
252-534
               

               
Cow position:
               
chr10:19191940-19191669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
208, 17
               

               
Conread position:
               
253-419
               

               
Cow position:
               
chr10:31202566-31202400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 33
               

               
Conread position:
               
253-458
               

               
Cow position:
               
chr10:37507963-37508162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
253-474
               

               
Cow position:
               
chr10:11112811-11112591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
149, 28
               

               
Conread position:
               
253-494
               

               
Cow position:
               
chr10:8853740-8853498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
14, 67
               

               
Conread position:
               
253-532
               

               
Cow position:
               
chr10:15868446-15868161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
12, 129
               

               
Conread position:
               
253-532
               

               
Cow position:
               
chr10:39228351-39228057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
253-534
               

               
Cow position:
               
chr10:46195971-46195694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
254-419
               

               
Cow position:
               
chr10:10104967-10104805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
254-476
               

               
Cow position:
               
chr10:39258302-39258530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
23, 138
               

               
Conread position:
               
254-531
               

               
Cow position:
               
chr10:33666031-33665751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
18, 87
               

               
Conread position:
               
254-531
               

               
Cow position:
               
chr10:36531537-36531819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 123
               

               
Conread position:
               
254-532
               

               
Cow position:
               
chr10:37529088-37529354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
189, 11
               

               
Conread position:
               
254-534
               

               
Cow position:
               
chr10:30369639-30369915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
205, 37
               

               
Conread position:
               
255-458
               

               
Cow position:
               
chr10:43459867-43460067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
255-489
               

               
Cow position:
               
chr10:49634252-49634019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
205, 79
               

               
Conread position:
               
255-532
               

               
Cow position:
               
chr10:24756596-24756328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
18, 44
               

               
Conread position:
               
260-532
               

               
Cow position:
               
chr10:39874958-39875238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
16, 224
               

               
Conread position:
               
261-466
               

               
Cow position:
               
chr10:14542052-14541848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 5
               

               
Conread position:
               
261-495
               

               
Cow position:
               
chr10:10153186-10152955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
197, 80
               

               
Conread position:
               
261-533
               

               
Cow position:
               
chr10:23390135-23390406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
11, 66
               

               
Conread position:
               
262-440
               

               
Cow position:
               
chr10:4329812-4329994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
262-532
               

               
Cow position:
               
chr10:35792108-35791842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
42, 199
               

               
Conread position:
               
262-534
               

               
Cow position:
               
chr10:31534918-31534640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
89, 124
               

               
Conread position:
               
264-532
               

               
Cow position:
               
chr10:48407311-48407047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
196, 38
               

               
Conread position:
               
265-510
               

               
Cow position:
               
chr10:54848955-54848712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
11, 77
               

               
Conread position:
               
265-530
               

               
Cow position:
               
chr10:66320903-66321169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 109
               

               
Conread position:
               
265-532
               

               
Cow position:
               
chr10:11463483-11463754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 132
               

               
Conread position:
               
265-532
               

               
Cow position:
               
chr10:38370275-38370547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 105
               

               
Conread position:
               
265-534
               

               
Cow position:
               
chr10:6852439-6852173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
199, 13
               

               
Conread position:
               
266-364
               

               
Cow position:
               
chr10:52824997-52825095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
99
               

               
Alignm identity:
               
82
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
266-423
               

               
Cow position:
               
chr10:14668574-14668418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
266-442
               

               
Cow position:
               
chr10:16641754-16641930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
124, 91
               

               
Conread position:
               
266-459
               

               
Cow position:
               
chr10:59417062-59417251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
266-467
               

               
Cow position:
               
chr10:49029824-49029624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
163, 86
               

               
Conread position:
               
266-488
               

               
Cow position:
               
chr10:46886323-46886110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
194, 30
               

               
Conread position:
               
266-488
               

               
Cow position:
               
chr10:60697453-60697670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
194, 91
               

               
Conread position:
               
266-495
               

               
Cow position:
               
chr10:5599823-5600059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
76, 220
               

               
Conread position:
               
266-499
               

               
Cow position:
               
chr10:16414399-16414630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
194, 86
               

               
Conread position:
               
266-518
               

               
Cow position:
               
chr10:35245777-35246024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
194, 68
               

               
Conread position:
               
266-518
               

               
Cow position:
               
chr10:43586108-43586362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
22, 89
               

               
Conread position:
               
266-529
               

               
Cow position:
               
chr10:23055917-23056164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
194, 33
               

               
Conread position:
               
266-531
               

               
Cow position:
               
chr10:50558754-50559014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
194, 51
               

               
Conread position:
               
266-532
               

               
Cow position:
               
chr10:22390773-22390502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
11, 87
               

               
Conread position:
               
266-532
               

               
Cow position:
               
chr10:28841128-28840864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
145, 36
               

               
Conread position:
               
266-532
               

               
Cow position:
               
chr10:31027465-31027734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 260
               

               
Conread position:
               
266-532
               

               
Cow position:
               
chr10:55395803-55396066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
193, 68
               

               
Conread position:
               
266-534
               

               
Cow position:
               
chr10:20095943-20095665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
96, 86
               

               
Conread position:
               
266-534
               

               
Cow position:
               
chr10:21657588-21657333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
194, 51
               

               
Conread position:
               
266-534
               

               
Cow position:
               
chr10:31400723-31400985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
85, 36
               

               
Conread position:
               
266-534
               

               
Cow position:
               
chr10:40163758-40164026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
194, 86
               

               
Conread position:
               
267-457
               

               
Cow position:
               
chr10:14188441-14188624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
267-497
               

               
Cow position:
               
chr10:23341068-23340850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
148, 0
               

               
Conread position:
               
267-504
               

               
Cow position:
               
chr10:17150046-17149816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
193, 11
               

               
Conread position:
               
267-530
               

               
Cow position:
               
chr10:28395129-28395390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
267-530
               

               
Cow position:
               
chr10:46327865-46327602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 86
               

               
Conread position:
               
267-532
               

               
Cow position:
               
chr10:2613541-2613278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
193, 68
               

               
Conread position:
               
267-532
               

               
Cow position:
               
chr10:5151527-5151254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 153
               

               
Conread position:
               
267-532
               

               
Cow position:
               
chr10:27118788-27119055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
110, 66
               

               
Conread position:
               
267-532
               

               
Cow position:
               
chr10:30353025-30352759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
119, 81
               

               
Conread position:
               
267-532
               

               
Cow position:
               
chr10:63940946-63940684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
96, 120
               

               
Conread position:
               
267-534
               

               
Cow position:
               
chr10:54504778-54504515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
192, 99
               

               
Conread position:
               
268-526
               

               
Cow position:
               
chr10:57786510-57786253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
141, 73
               

               
Conread position:
               
268-530
               

               
Cow position:
               
chr10:8093149-8093404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
191, 70
               

               
Conread position:
               
268-532
               

               
Cow position:
               
chr10:3364011-3364273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
192, 34
               

               
Conread position:
               
268-532
               

               
Cow position:
               
chr10:58043953-58044219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
66, 97
               

               
Conread position:
               
268-534
               

               
Cow position:
               
chr10:23506315-23506581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 34
               

               
Conread position:
               
268-534
               

               
Cow position:
               
chr10:31362045-31362304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
191, 73
               

               
Conread position:
               
269-489
               

               
Cow position:
               
chr10:49923193-49923421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
269-504
               

               
Cow position:
               
chr10:7383444-7383676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
188, 60
               

               
Conread position:
               
270-489
               

               
Cow position:
               
chr10:2857219-2857001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 83
               

               
Conread position:
               
270-531
               

               
Cow position:
               
chr10:37415954-37415700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
187, 47
               

               
Conread position:
               
271-464
               

               
Cow position:
               
chr10:58148999-58149190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
271-497
               

               
Cow position:
               
chr10:9575878-9576105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
190, 81
               

               
Conread position:
               
271-518
               

               
Cow position:
               
chr10:31803307-31803557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
25, 63
               

               
Conread position:
               
272-532
               

               
Cow position:
               
chr10:52695557-52695817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
188, 81
               

               
Conread position:
               
275-458
               

               
Cow position:
               
chr10:53563951-53564135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
275-530
               

               
Cow position:
               
chr10:29379804-29380047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
185, 78
               

               
Conread position:
               
275-532
               

               
Cow position:
               
chr10:6505519-6505264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
29, 59
               

               
Conread position:
               
275-532
               

               
Cow position:
               
chr10:30216550-30216796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
185, 79
               

               
Conread position:
               
275-532
               

               
Cow position:
               
chr10:30522897-30523153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
185, 77
               

               
Conread position:
               
275-534
               

               
Cow position:
               
chr10:39124302-39124037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
65, 79
               

               
Conread position:
               
278-530
               

               
Cow position:
               
chr10:53674991-53674737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
15, 66
               

               
Conread position:
               
279-530
               

               
Cow position:
               
chr10:56828157-56828405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
181, 74
               

               
Conread position:
               
287-484
               

               
Cow position:
               
chr10:32503586-32503384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
297-531
               

               
Cow position:
               
chr10:21422017-21422247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
163, 55
               

               
Conread position:
               
303-500
               

               
Cow position:
               
chr10:37295532-37295729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 56
               

               
Conread position:
               
333-532
               

               
Cow position:
               
chr10:48573568-48573770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 173
               

               
Conread position:
               
344-532
               

               
Cow position:
               
chr10:6199120-6198929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
18, 45
               

               
Conread position:
               
344-532
               

               
Cow position:
               
chr10:8449602-8449411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
353-531
               

               
Cow position:
               
chr10:37668066-37668245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
108, 31
               

               
Conread position:
               
353-532
               

               
Cow position:
               
chr10:22633535-22633713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
107, 140
               

               
Conread position:
               
353-532
               

               
Cow position:
               
chr10:44421815-44421995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
107, 79
               

               
Conread position:
               
353-534
               

               
Cow position:
               
chr10:37768393-37768211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
106, 19
               

               
Conread position:
               
354-532
               

               
Cow position:
               
chr10:53405562-53405387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
106, 130
               
Show alignments to all cow chromosomes.