Cow genome map

Conread name: Pig1-57C11

Conread position: 2-160
Cow position: chr11:7073010-7073162 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 26, 42

Conread position: 2-160
Cow position: chr11:44861062-44861226 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 2-182
Cow position: chr11:44157770-44157953 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 28, 159

Conread position: 2-196
Cow position: chr11:25527044-25526843 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 26, 109

Conread position: 2-219
Cow position: chr11:9157958-9158174 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 167
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 26, 38

Conread position: 2-222
Cow position: chr11:54209090-54208859 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 26, 159

Conread position: 2-227
Cow position: chr11:52462559-52462323 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 24, 166

Conread position: 2-237
Cow position: chr11:19103023-19103269 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 187
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 26, 159

Conread position: 2-237
Cow position: chr11:26125465-26125711 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 159

Conread position: 2-237
Cow position: chr11:37093599-37093845 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 190
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 26, 88

Conread position: 2-237
Cow position: chr11:53287992-53288224 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 130

Conread position: 2-237
Cow position: chr11:53432306-53432552 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 185
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 26, 158

Conread position: 2-242
Cow position: chr11:71329107-71328858 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 146

Conread position: 2-248
Cow position: chr11:37492181-37492418 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 24, 159

Conread position: 2-249
Cow position: chr11:12093224-12092973 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 159

Conread position: 2-249
Cow position: chr11:20921283-20921541 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 180
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 26, 95

Conread position: 2-249
Cow position: chr11:28230286-28230537 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 26, 62

Conread position: 2-249
Cow position: chr11:34020371-34020135 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 181
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 25, 57

Conread position: 2-249
Cow position: chr11:52418854-52418598 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 64

Conread position: 2-256
Cow position: chr11:9220547-9220812 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 78

Conread position: 2-256
Cow position: chr11:9659931-9660172 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 195
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 24, 161

Conread position: 2-256
Cow position: chr11:44496123-44496376 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 68

Conread position: 2-274
Cow position: chr11:28055131-28055414 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 207
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 26, 256

Conread position: 2-290
Cow position: chr11:85394346-85394643 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 217
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 26, 159

Conread position: 2-308
Cow position: chr11:38835954-38836275 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 229
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 26, 159

Conread position: 3-197
Cow position: chr11:66725962-66725772 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 25, 45

Conread position: 3-201
Cow position: chr11:40777270-40777471 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 125

Conread position: 3-211
Cow position: chr11:44507631-44507423 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 11

Conread position: 3-216
Cow position: chr11:77729064-77729277 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 158

Conread position: 3-236
Cow position: chr11:4028088-4028333 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 25, 158

Conread position: 3-237
Cow position: chr11:11987582-11987336 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 189
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 25, 159

Conread position: 3-237
Cow position: chr11:12358960-12359202 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 155

Conread position: 3-237
Cow position: chr11:23876766-23876521 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 25, 158

Conread position: 3-237
Cow position: chr11:24392788-24392544 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 188
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 25, 158

Conread position: 3-237
Cow position: chr11:43515169-43515416 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 25, 45

Conread position: 3-237
Cow position: chr11:72110499-72110742 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 182
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 44

Conread position: 3-241
Cow position: chr11:19064788-19065043 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 182
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 3-249
Cow position: chr11:32450329-32450074 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 186
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 25, 166

Conread position: 3-249
Cow position: chr11:45110594-45110342 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 25, 34

Conread position: 3-256
Cow position: chr11:8262234-8262494 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 32, 46

Conread position: 3-256
Cow position: chr11:8887688-8887932 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 23, 160

Conread position: 3-256
Cow position: chr11:10210501-10210750 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 54

Conread position: 3-256
Cow position: chr11:24677520-24677272 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 159

Conread position: 3-256
Cow position: chr11:28063152-28062891 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 156

Conread position: 3-312
Cow position: chr11:10846906-10846591 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 217
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 25, 45

Conread position: 4-213
Cow position: chr11:76375008-76375218 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 163
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 24, 78

Conread position: 4-240
Cow position: chr11:15998359-15998127 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 22, 163

Conread position: 8-231
Cow position: chr11:81853131-81853367 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 169
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 18, 79

Conread position: 8-258
Cow position: chr11:31925657-31925404 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 20, 69

Conread position: 10-185
Cow position: chr11:33195157-33195335 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 18, 150

Conread position: 10-237
Cow position: chr11:29669174-29669408 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 151

Conread position: 10-249
Cow position: chr11:3492467-3492220 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 184
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 104, 18

Conread position: 10-249
Cow position: chr11:4041606-4041854 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 19, 54

Conread position: 10-249
Cow position: chr11:9736497-9736740 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 54

Conread position: 10-249
Cow position: chr11:37477661-37477910 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 179
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 161

Conread position: 10-249
Cow position: chr11:67847112-67847360 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 18, 150

Conread position: 10-254
Cow position: chr11:7687376-7687114 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 181
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 165

Conread position: 10-277
Cow position: chr11:57628592-57628872 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 199
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 18, 158

Conread position: 12-241
Cow position: chr11:52530482-52530251 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 16, 156

Conread position: 13-237
Cow position: chr11:41171241-41171469 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 170
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 15, 171

Conread position: 27-249
Cow position: chr11:39798836-39799068 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 87, 140

Conread position: 32-249
Cow position: chr11:67449922-67449700 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 165
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 82, 43

Conread position: 37-227
Cow position: chr11:30125809-30126001 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 159
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 75, 25

Conread position: 38-249
Cow position: chr11:9607244-9607456 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 165
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 76, 127

Conread position: 41-256
Cow position: chr11:7112879-7112656 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 71, 10

Conread position: 49-254
Cow position: chr11:65162120-65162328 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 14

Conread position: 55-249
Cow position: chr11:15983055-15982851 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 112

Conread position: 59-237
Cow position: chr11:4271423-4271619 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 109

Conread position: 138-249
Cow position: chr11:56179241-56179132 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 92, 40

Conread position: 156-349
Cow position: chr11:25316059-25315875 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 166-528
Cow position: chr11:63998815-63999168 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 6

Conread position: 194-467
Cow position: chr11:22884659-22884396 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 27

Conread position: 219-534
Cow position: chr11:11125897-11125578 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 214
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 29, 80

Conread position: 237-454
Cow position: chr11:57767402-57767186 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 14

Conread position: 241-485
Cow position: chr11:18447295-18447529 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 219, 7

Conread position: 242-533
Cow position: chr11:68913351-68913059 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 198
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 114, 137

Conread position: 247-534
Cow position: chr11:2917390-2917670 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 213, 94

Conread position: 248-407
Cow position: chr11:6784404-6784251 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 15, 0

Conread position: 248-436
Cow position: chr11:44614964-44615153 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 149, 101

Conread position: 248-437
Cow position: chr11:63201458-63201266 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 66, 99

Conread position: 248-438
Cow position: chr11:4621236-4621419 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 248-494
Cow position: chr11:42884584-42884832 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 171
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 105, 14

Conread position: 248-531
Cow position: chr11:15772511-15772796 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 194
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 86, 113

Conread position: 248-532
Cow position: chr11:39060404-39060682 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 204
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 212, 23

Conread position: 248-532
Cow position: chr11:53773885-53773595 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 106, 135

Conread position: 250-417
Cow position: chr11:12768597-12768431 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 115

Conread position: 250-418
Cow position: chr11:70821244-70821076 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 106, 128

Conread position: 250-458
Cow position: chr11:3175869-3175665 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 44

Conread position: 250-458
Cow position: chr11:48315200-48315405 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 250-460
Cow position: chr11:56115137-56114928 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 92

Conread position: 250-532
Cow position: chr11:5961503-5961229 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 189
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 101, 15

Conread position: 251-458
Cow position: chr11:30986834-30986633 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 251-513
Cow position: chr11:25119737-25119997 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 184
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 208, 99

Conread position: 251-528
Cow position: chr11:62239940-62239665 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 185
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 206, 77

Conread position: 251-531
Cow position: chr11:55911447-55911716 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 11, 168

Conread position: 251-533
Cow position: chr11:63866463-63866738 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 206
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 132, 20

Conread position: 251-534
Cow position: chr11:44032204-44031917 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 216
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 209, 20

Conread position: 252-441
Cow position: chr11:29782355-29782174 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 54, 0

Conread position: 252-453
Cow position: chr11:42206613-42206418 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 252-500
Cow position: chr11:17889528-17889783 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 173
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 132

Conread position: 252-530
Cow position: chr11:45435275-45435000 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 203
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 15, 57

Conread position: 252-532
Cow position: chr11:8437490-8437772 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 203
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 21, 51

Conread position: 252-534
Cow position: chr11:29308780-29308490 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 190
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 101, 130

Conread position: 253-427
Cow position: chr11:63484136-63483965 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 18, 0

Conread position: 253-435
Cow position: chr11:53651836-53651655 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 18

Conread position: 253-480
Cow position: chr11:3896502-3896731 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 18

Conread position: 253-505
Cow position: chr11:64077305-64077564 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 178
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 126, 110

Conread position: 253-531
Cow position: chr11:81134972-81135248 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 206, 97

Conread position: 253-532
Cow position: chr11:53778817-53778533 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 189
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 90, 242

Conread position: 254-415
Cow position: chr11:81340346-81340506 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 100

Conread position: 254-427
Cow position: chr11:81175794-81175619 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 254-475
Cow position: chr11:47784976-47784747 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 210

Conread position: 255-435
Cow position: chr11:54872567-54872745 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 9

Conread position: 255-474
Cow position: chr11:63165456-63165673 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 205, 73

Conread position: 255-534
Cow position: chr11:62812758-62813036 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 209
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 31, 16

Conread position: 257-409
Cow position: chr11:81928319-81928467 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 47, 85

Conread position: 258-533
Cow position: chr11:50152622-50152899 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 98, 8

Conread position: 259-485
Cow position: chr11:4225277-4225060 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 201, 13

Conread position: 259-494
Cow position: chr11:11469466-11469694 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 166
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 201, 25

Conread position: 260-512
Cow position: chr11:1932298-1932556 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 176
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 260-512
Cow position: chr11:75285566-75285830 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 124, 101

Conread position: 260-532
Cow position: chr11:45646408-45646677 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 201
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 112, 22

Conread position: 260-534
Cow position: chr11:81167841-81168116 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 180
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 202, 110

Conread position: 261-530
Cow position: chr11:34646784-34646507 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 198
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 90, 0

Conread position: 261-532
Cow position: chr11:17676186-17676453 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 197, 92

Conread position: 262-442
Cow position: chr11:77241890-77241713 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 127
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 262-532
Cow position: chr11:67614737-67615011 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 193
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 198, 90

Conread position: 262-533
Cow position: chr11:41293615-41293901 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 198
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 11, 245

Conread position: 262-534
Cow position: chr11:2575719-2575988 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 67

Conread position: 262-534
Cow position: chr11:15339244-15338981 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 189
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 38

Conread position: 262-534
Cow position: chr11:35212983-35213253 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 188
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 73, 43

Conread position: 262-534
Cow position: chr11:49872699-49872971 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 196
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 86, 167

Conread position: 262-534
Cow position: chr11:55494852-55494593 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 190
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 198, 43

Conread position: 262-534
Cow position: chr11:62620564-62620295 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 199
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 78, 99

Conread position: 264-485
Cow position: chr11:30894817-30895040 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 75, 96

Conread position: 264-528
Cow position: chr11:41985862-41986122 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 192, 95

Conread position: 265-508
Cow position: chr11:72292746-72292494 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 242

Conread position: 265-532
Cow position: chr11:27248673-27248410 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 87

Conread position: 266-406
Cow position: chr11:63977239-63977101 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 266-420
Cow position: chr11:65431701-65431548 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 266-495
Cow position: chr11:897848-897625 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 194, 37

Conread position: 266-504
Cow position: chr11:83323761-83323509 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 123, 86

Conread position: 266-508
Cow position: chr11:15017242-15016998 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 92, 211

Conread position: 266-526
Cow position: chr11:4636991-4637250 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 96, 87

Conread position: 266-532
Cow position: chr11:1625038-1625306 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 193
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 95, 118

Conread position: 266-532
Cow position: chr11:27747102-27746843 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 194, 75

Conread position: 266-532
Cow position: chr11:35580445-35580175 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 266-532
Cow position: chr11:40818449-40818720 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 185
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 178, 14

Conread position: 266-532
Cow position: chr11:67600962-67600700 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 176
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 187, 85

Conread position: 266-533
Cow position: chr11:17721617-17721888 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 85, 0

Conread position: 266-533
Cow position: chr11:46922703-46922982 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 108, 93

Conread position: 266-533
Cow position: chr11:83043183-83043447 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 194, 68

Conread position: 266-534
Cow position: chr11:11558352-11558083 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 193
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 96, 23

Conread position: 266-534
Cow position: chr11:20238860-20238587 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 0

Conread position: 267-405
Cow position: chr11:32586943-32587079 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 267-494
Cow position: chr11:80639369-80639597 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 176, 45

Conread position: 267-518
Cow position: chr11:13061071-13061305 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 193, 52

Conread position: 267-530
Cow position: chr11:29960475-29960215 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 195
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 193, 26

Conread position: 267-531
Cow position: chr11:30830440-30830697 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 193, 32

Conread position: 267-532
Cow position: chr11:52380689-52380956 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 194
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 193, 238

Conread position: 267-532
Cow position: chr11:62789310-62789046 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 193
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 195, 74

Conread position: 268-532
Cow position: chr11:33409084-33409343 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 192, 34

Conread position: 269-459
Cow position: chr11:6255828-6256012 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 270-526
Cow position: chr11:30867357-30867104 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 171
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 190, 71

Conread position: 271-534
Cow position: chr11:48544615-48544347 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 189
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 118, 77

Conread position: 272-512
Cow position: chr11:24602136-24601901 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 30

Conread position: 272-534
Cow position: chr11:80564475-80564208 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 190
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 77, 106

Conread position: 275-531
Cow position: chr11:17036357-17036611 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 185, 67

Conread position: 276-442
Cow position: chr11:15278844-15279005 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 279-477
Cow position: chr11:34467733-34467541 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 279-533
Cow position: chr11:77319583-77319329 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 180
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 181, 73

Conread position: 279-534
Cow position: chr11:18910713-18910963 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 176
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 208, 73

Conread position: 280-508
Cow position: chr11:18852073-18851850 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 180, 70

Conread position: 280-532
Cow position: chr11:47772212-47772475 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 188
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 50, 0

Conread position: 292-532
Cow position: chr11:39499513-39499271 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 183
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 78, 61

Conread position: 297-534
Cow position: chr11:34121351-34121110 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 65, 57

Conread position: 303-534
Cow position: chr11:3393067-3393296 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 165
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 156, 38

Conread position: 306-534
Cow position: chr11:23586784-23586551 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 12

Conread position: 326-531
Cow position: chr11:377519-377725 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 140
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 132, 32

Conread position: 326-532
Cow position: chr11:26845473-26845677 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 134, 28

Conread position: 333-531
Cow position: chr11:28644202-28644003 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 127, 26

Conread position: 333-534
Cow position: chr11:35803251-35803049 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 20

Conread position: 334-531
Cow position: chr11:16342111-16342312 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 153
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 7, 0

Conread position: 334-532
Cow position: chr11:48272316-48272115 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 335-534
Cow position: chr11:69076025-69075824 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 127, 116

Conread position: 338-534
Cow position: chr11:69119406-69119207 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 143
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 13, 162

Conread position: 344-534
Cow position: chr11:44636649-44636842 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 116, 17

Conread position: 354-532
Cow position: chr11:65767295-65767115 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 356-534
Cow position: chr11:10213475-10213650 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 104, 41

Conread position: 359-530
Cow position: chr11:28168332-28168505 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 386-534
Cow position: chr11:54218778-54218632 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 74, 106

Show alignments to all cow chromosomes.