Cow genome map

Conread name: Pig1-57C11

Conread position: 2-218
Cow position: chr12:8310935-8310711 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 168
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 24, 172

Conread position: 2-237
Cow position: chr12:6406897-6407138 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 182
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 80

Conread position: 2-237
Cow position: chr12:8678369-8678615 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 26, 157

Conread position: 2-237
Cow position: chr12:11097991-11097745 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 188
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 26, 159

Conread position: 2-241
Cow position: chr12:21254906-21255149 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 179
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 69

Conread position: 2-241
Cow position: chr12:32653297-32653047 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 26, 157

Conread position: 2-244
Cow position: chr12:42860065-42860319 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 191
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 26, 159

Conread position: 2-249
Cow position: chr12:3360663-3360405 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 187
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 26, 170

Conread position: 2-249
Cow position: chr12:21426446-21426197 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 189
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 26, 62

Conread position: 2-249
Cow position: chr12:21883776-21883516 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 26, 47

Conread position: 2-289
Cow position: chr12:1402243-1401948 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 26, 159

Conread position: 3-212
Cow position: chr12:20998371-20998581 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 159

Conread position: 3-215
Cow position: chr12:21941528-21941311 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 168
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 158

Conread position: 3-236
Cow position: chr12:252308-252552 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 179
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 25, 42

Conread position: 3-237
Cow position: chr12:27933197-27933438 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 185
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 25, 158

Conread position: 3-249
Cow position: chr12:2282295-2282040 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 192
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 24, 38

Conread position: 3-249
Cow position: chr12:26141562-26141305 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 25, 80

Conread position: 3-249
Cow position: chr12:43031634-43031882 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 183
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 25, 61

Conread position: 3-256
Cow position: chr12:15951507-15951761 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 54

Conread position: 3-269
Cow position: chr12:21197581-21197305 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 196
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 25, 158

Conread position: 4-119
Cow position: chr12:42420662-42420778 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 4-227
Cow position: chr12:2546-2320 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 157

Conread position: 10-218
Cow position: chr12:22206003-22206218 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 151

Conread position: 10-249
Cow position: chr12:37558301-37558051 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 184
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 18, 158

Conread position: 11-249
Cow position: chr12:21207438-21207189 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 180
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 17, 148

Conread position: 13-237
Cow position: chr12:25101320-25101560 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 15, 81

Conread position: 33-196
Cow position: chr12:21901674-21901507 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 54, 130

Conread position: 49-219
Cow position: chr12:3630893-3630716 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 50, 44

Conread position: 123-256
Cow position: chr12:22121351-22121219 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 114
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 127, 39

Conread position: 246-458
Cow position: chr12:48579017-48578814 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 149
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 247-436
Cow position: chr12:17254323-17254134 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 131, 114

Conread position: 248-532
Cow position: chr12:9766699-9766983 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 206
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 8, 52

Conread position: 248-532
Cow position: chr12:31530479-31530186 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 7, 88

Conread position: 250-441
Cow position: chr12:583325-583522 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 250-448
Cow position: chr12:6958397-6958200 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 133
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 113, 0

Conread position: 250-500
Cow position: chr12:40157850-40158097 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 206, 89

Conread position: 250-534
Cow position: chr12:15429417-15429702 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 197
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 22, 50

Conread position: 251-409
Cow position: chr12:15151701-15151849 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 251-423
Cow position: chr12:2964222-2964053 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 20, 0

Conread position: 251-430
Cow position: chr12:46106967-46106789 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 146

Conread position: 251-493
Cow position: chr12:18563339-18563097 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 120, 90

Conread position: 251-497
Cow position: chr12:45092617-45092378 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 87

Conread position: 251-510
Cow position: chr12:6241504-6241232 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 251-531
Cow position: chr12:18582824-18583095 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 209, 14

Conread position: 251-532
Cow position: chr12:15089691-15089410 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 13

Conread position: 251-532
Cow position: chr12:16670443-16670162 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 116, 47

Conread position: 251-532
Cow position: chr12:25561542-25561267 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 200
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 208, 20

Conread position: 252-472
Cow position: chr12:14986924-14986704 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 166
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 10, 101

Conread position: 252-474
Cow position: chr12:24437456-24437682 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 252-475
Cow position: chr12:4512275-4512497 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 166
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 11, 16

Conread position: 252-519
Cow position: chr12:27176811-27176544 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 192
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 102, 11

Conread position: 252-519
Cow position: chr12:27192193-27192460 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 102, 11

Conread position: 252-532
Cow position: chr12:44622535-44622251 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 201
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 89, 19

Conread position: 253-458
Cow position: chr12:29316287-29316491 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 105, 64

Conread position: 253-488
Cow position: chr12:36261869-36261628 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 94, 0

Conread position: 253-496
Cow position: chr12:18123840-18123599 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 177
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 207, 18

Conread position: 253-514
Cow position: chr12:18513753-18514015 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 183
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 103, 11

Conread position: 253-531
Cow position: chr12:14223159-14222874 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 185
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 131

Conread position: 253-532
Cow position: chr12:42602062-42602345 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 191
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 88, 118

Conread position: 254-435
Cow position: chr12:19272517-19272695 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 255-530
Cow position: chr12:41218494-41218768 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 181
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 108, 130

Conread position: 255-532
Cow position: chr12:17031780-17031512 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 27, 10

Conread position: 260-534
Cow position: chr12:18420751-18421030 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 195
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 13, 134

Conread position: 262-530
Cow position: chr12:29357900-29358158 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 177
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 243, 17

Conread position: 262-532
Cow position: chr12:24032654-24032394 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 195, 30

Conread position: 265-532
Cow position: chr12:38774082-38774342 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 180
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 200, 83

Conread position: 266-416
Cow position: chr12:8711144-8710996 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 266-448
Cow position: chr12:31602660-31602841 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 129
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 98, 12

Conread position: 266-518
Cow position: chr12:5554175-5554425 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 181
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 194, 78

Conread position: 266-531
Cow position: chr12:20776767-20777025 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 191
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 117, 86

Conread position: 266-532
Cow position: chr12:18518834-18518563 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 194, 87

Conread position: 266-532
Cow position: chr12:33129416-33129159 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 82, 0

Conread position: 266-532
Cow position: chr12:37169787-37170046 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 41

Conread position: 266-534
Cow position: chr12:11057028-11056769 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 144, 33

Conread position: 266-534
Cow position: chr12:17080428-17080153 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 184
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 108, 76

Conread position: 267-445
Cow position: chr12:38679209-38679033 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 125
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 267-468
Cow position: chr12:29731472-29731273 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 193, 73

Conread position: 267-475
Cow position: chr12:23714833-23714627 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 193, 61

Conread position: 267-477
Cow position: chr12:2734750-2734958 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 193, 74

Conread position: 267-503
Cow position: chr12:17252042-17252275 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 193, 61

Conread position: 267-518
Cow position: chr12:19261356-19261104 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 180
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 71, 86

Conread position: 267-532
Cow position: chr12:22284961-22285222 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 187
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 122, 17

Conread position: 267-534
Cow position: chr12:30745877-30745610 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 93, 74

Conread position: 268-484
Cow position: chr12:45039267-45039050 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 175, 71

Conread position: 268-500
Cow position: chr12:12233041-12232810 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 144, 84

Conread position: 270-480
Cow position: chr12:33949058-33948851 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 189, 26

Conread position: 271-456
Cow position: chr12:44861100-44861287 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 127
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 271-534
Cow position: chr12:32169703-32169434 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 73, 43

Conread position: 272-404
Cow position: chr12:10611813-10611684 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 275-532
Cow position: chr12:15703342-15703606 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 28

Conread position: 275-532
Cow position: chr12:24116220-24116466 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 179
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 185, 66

Conread position: 276-518
Cow position: chr12:26777042-26777281 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 184, 65

Conread position: 277-532
Cow position: chr12:9143535-9143284 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 70, 21

Conread position: 279-532
Cow position: chr12:15122474-15122219 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 184
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 164, 73

Conread position: 284-530
Cow position: chr12:17269945-17269698 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 176, 68

Conread position: 289-532
Cow position: chr12:5631745-5631985 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 171, 28

Conread position: 294-532
Cow position: chr12:25917142-25917372 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 166, 81

Conread position: 296-532
Cow position: chr12:37770998-37770773 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 170
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 164, 16

Conread position: 326-532
Cow position: chr12:27037347-27037554 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 133, 170

Conread position: 336-532
Cow position: chr12:45820275-45820471 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 41, 18

Show alignments to all cow chromosomes.