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Cow genome map

           
Conread name:
           
Pig1-57C11
        

               
Conread position:
               
2-203
               

               
Cow position:
               
chr15:8098890-8098688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
27, 20
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr15:44828221-44828009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr15:19738643-19738868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
26, 161
               

               
Conread position:
               
2-235
               

               
Cow position:
               
chr15:22920532-22920297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 58
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr15:6156557-6156797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
109, 26
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr15:18576130-18575884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
26, 162
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr15:21960919-21960694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
24, 161
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr15:35747702-35747473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
24, 148
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr15:42490611-42490366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 84
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr15:42936120-42935878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chr15:8000836-8001069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
24, 169
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr15:50144912-50144655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
26, 173
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr15:525447-525698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr15:12421757-12422011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr15:32494979-32495230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
28, 167
               

               
Conread position:
               
2-245
               

               
Cow position:
               
chr15:2648250-2648501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
26, 80
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr15:6456696-6456440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 167
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr15:690209-689967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
29, 62
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr15:1519737-1519998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
26, 168
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr15:1771908-1771650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
26, 153
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr15:1781662-1781411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
26, 91
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr15:7186632-7186888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
105, 30
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr15:13428450-13428197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
26, 46
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr15:17080782-17081031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
26, 42
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr15:20748822-20748561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
27, 169
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr15:21877948-21878205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 57
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr15:28490737-28490984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
26, 48
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr15:50124529-50124786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
26, 70
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr15:6371433-6371677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
24, 86
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr15:6386887-6387149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 159
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr15:17039845-17040109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
26, 148
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr15:32692967-32692692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
26, 95
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr15:35734867-35734613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr15:42321009-42321265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
26, 158
               

               
Conread position:
               
2-257
               

               
Cow position:
               
chr15:370251-370530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
24, 179
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr15:4649243-4648990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
112, 26
               

               
Conread position:
               
2-290
               

               
Cow position:
               
chr15:6554446-6554748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
2-307
               

               
Cow position:
               
chr15:31358309-31357990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
2-309
               

               
Cow position:
               
chr15:24294497-24294186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
3-160
               

               
Cow position:
               
chr15:23157422-23157585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
3-160
               

               
Cow position:
               
chr15:25789785-25789946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
3-182
               

               
Cow position:
               
chr15:36648319-36648136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
3-190
               

               
Cow position:
               
chr15:14583196-14583383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 66
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chr15:38979323-38979128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 169
               

               
Conread position:
               
3-196
               

               
Cow position:
               
chr15:6650642-6650837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 41
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr15:3261999-3262201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
25, 38
               

               
Conread position:
               
3-212
               

               
Cow position:
               
chr15:10888015-10887805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
25, 71
               

               
Conread position:
               
3-227
               

               
Cow position:
               
chr15:41365588-41365358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
25, 166
               

               
Conread position:
               
3-228
               

               
Cow position:
               
chr15:4681629-4681395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
25, 155
               

               
Conread position:
               
3-236
               

               
Cow position:
               
chr15:24793462-24793225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 166
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr15:2076062-2075820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
25, 155
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr15:4764618-4764375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
25, 44
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr15:15347715-15347960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
25, 158
               

               
Conread position:
               
3-237
               

               
Cow position:
               
chr15:35754418-35754659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
25, 223
               

               
Conread position:
               
3-243
               

               
Cow position:
               
chr15:316924-317174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 158
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr15:51215999-51215745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
26, 158
               

               
Conread position:
               
3-248
               

               
Cow position:
               
chr15:17271966-17272228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 255
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr15:1763497-1763242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
25, 171
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr15:4143355-4143608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 79
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr15:7260033-7259776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
25, 136
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr15:11598706-11598963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
25, 165
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr15:22204708-22204965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
25, 165
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr15:32680140-32680403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
23, 51
               

               
Conread position:
               
3-254
               

               
Cow position:
               
chr15:4795085-4794824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
26, 41
               

               
Conread position:
               
3-255
               

               
Cow position:
               
chr15:2923921-2923661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
25, 95
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr15:35648809-35649054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
3-263
               

               
Cow position:
               
chr15:2011490-2011227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
25, 57
               

               
Conread position:
               
3-264
               

               
Cow position:
               
chr15:36642036-36641769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr15:7933383-7933105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 89
               

               
Conread position:
               
3-272
               

               
Cow position:
               
chr15:37391913-37391632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
25, 158
               

               
Conread position:
               
3-312
               

               
Cow position:
               
chr15:7836647-7836326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr15:7233716-7233514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
24, 60
               

               
Conread position:
               
4-227
               

               
Cow position:
               
chr15:6277851-6278081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
22, 49
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr15:6594420-6594674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
24, 92
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr15:7544284-7544030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
24, 143
               

               
Conread position:
               
4-262
               

               
Cow position:
               
chr15:327813-327549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
25, 55
               

               
Conread position:
               
5-202
               

               
Cow position:
               
chr15:17291859-17291657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
23, 58
               

               
Conread position:
               
5-248
               

               
Cow position:
               
chr15:32722775-32723025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
26, 47
               

               
Conread position:
               
7-232
               

               
Cow position:
               
chr15:1236802-1236575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
21, 151
               

               
Conread position:
               
8-187
               

               
Cow position:
               
chr15:17682795-17682974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
18, 150
               

               
Conread position:
               
8-237
               

               
Cow position:
               
chr15:4384675-4384435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
20, 153
               

               
Conread position:
               
8-249
               

               
Cow position:
               
chr15:51800141-51799901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
18, 54
               

               
Conread position:
               
9-244
               

               
Cow position:
               
chr15:18333428-18333670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
19, 152
               

               
Conread position:
               
10-236
               

               
Cow position:
               
chr15:32709943-32709709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 66
               

               
Conread position:
               
10-237
               

               
Cow position:
               
chr15:2902751-2902984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
18, 151
               

               
Conread position:
               
10-237
               

               
Cow position:
               
chr15:44069191-44068959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 151
               

               
Conread position:
               
10-241
               

               
Cow position:
               
chr15:55599-55365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr15:18268589-18268826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
18, 54
               

               
Conread position:
               
10-252
               

               
Cow position:
               
chr15:21816349-21816592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 54
               

               
Conread position:
               
10-356
               

               
Cow position:
               
chr15:17787748-17788107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
14, 23
               

               
Conread position:
               
11-154
               

               
Cow position:
               
chr15:4670820-4670674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
11-243
               

               
Cow position:
               
chr15:45886203-45885972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 91
               

               
Conread position:
               
16-308
               

               
Cow position:
               
chr15:21666627-21666935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
14, 79
               

               
Conread position:
               
27-249
               

               
Cow position:
               
chr15:8673167-8673398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
88, 31
               

               
Conread position:
               
32-249
               

               
Cow position:
               
chr15:6184478-6184282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
32-256
               

               
Cow position:
               
chr15:10479313-10479543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
43, 73
               

               
Conread position:
               
33-226
               

               
Cow position:
               
chr15:21448449-21448249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
39-218
               

               
Cow position:
               
chr15:4630545-4630732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
60, 122
               

               
Conread position:
               
40-186
               

               
Cow position:
               
chr15:4677874-4677724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
49-249
               

               
Cow position:
               
chr15:2593439-2593649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
65, 118
               

               
Conread position:
               
52-255
               

               
Cow position:
               
chr15:49676395-49676188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
159, 104
               

               
Conread position:
               
64-267
               

               
Cow position:
               
chr15:36627260-36627469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
70, 103
               

               
Conread position:
               
101-249
               

               
Cow position:
               
chr15:53338369-53338212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
13, 66
               

               
Conread position:
               
190-492
               

               
Cow position:
               
chr15:30316746-30316451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 55
               

               
Conread position:
               
224-456
               

               
Cow position:
               
chr15:29927809-29928043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
22, 12
               

               
Conread position:
               
233-454
               

               
Cow position:
               
chr15:12045684-12045461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
123, 38
               

               
Conread position:
               
234-449
               

               
Cow position:
               
chr15:46059214-46059433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
110, 14
               

               
Conread position:
               
240-427
               

               
Cow position:
               
chr15:40844758-40844571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
111, 88
               

               
Conread position:
               
242-489
               

               
Cow position:
               
chr15:26896834-26896579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
244-467
               

               
Cow position:
               
chr15:34223735-34223957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
42, 27
               

               
Conread position:
               
248-456
               

               
Cow position:
               
chr15:12974207-12974417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
96, 17
               

               
Conread position:
               
248-532
               

               
Cow position:
               
chr15:51307795-51307526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
212, 17
               

               
Conread position:
               
249-528
               

               
Cow position:
               
chr15:19554054-19553773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
107, 247
               

               
Conread position:
               
250-435
               

               
Cow position:
               
chr15:40000799-40000978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
51, 92
               

               
Conread position:
               
250-484
               

               
Cow position:
               
chr15:19002412-19002168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
250-522
               

               
Cow position:
               
chr15:40834988-40835258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
207, 102
               

               
Conread position:
               
250-532
               

               
Cow position:
               
chr15:20391402-20391121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 13
               

               
Conread position:
               
250-532
               

               
Cow position:
               
chr15:21941975-21941690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
101, 137
               

               
Conread position:
               
250-532
               

               
Cow position:
               
chr15:24967679-24967943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
249, 13
               

               
Conread position:
               
250-532
               

               
Cow position:
               
chr15:30471105-30470816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
92, 21
               

               
Conread position:
               
251-456
               

               
Cow position:
               
chr15:20566791-20566990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
251-496
               

               
Cow position:
               
chr15:22532126-22532369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
17, 102
               

               
Conread position:
               
251-532
               

               
Cow position:
               
chr15:13395421-13395704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
10, 118
               

               
Conread position:
               
251-534
               

               
Cow position:
               
chr15:36353540-36353826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
36, 111
               

               
Conread position:
               
252-409
               

               
Cow position:
               
chr15:47920271-47920119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 19
               

               
Conread position:
               
252-432
               

               
Cow position:
               
chr15:27975997-27975817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
252-463
               

               
Cow position:
               
chr15:25595652-25595443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
99, 60
               

               
Conread position:
               
252-494
               

               
Cow position:
               
chr15:7751037-7750793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
252-511
               

               
Cow position:
               
chr15:26851345-26851092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
176, 11
               

               
Conread position:
               
252-528
               

               
Cow position:
               
chr15:52316936-52317208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
206, 19
               

               
Conread position:
               
252-532
               

               
Cow position:
               
chr15:1857601-1857880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
119, 65
               

               
Conread position:
               
252-532
               

               
Cow position:
               
chr15:5717592-5717866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
252-532
               

               
Cow position:
               
chr15:25571938-25571654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
19, 131
               

               
Conread position:
               
253-458
               

               
Cow position:
               
chr15:41475950-41475750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
253-509
               

               
Cow position:
               
chr15:14474212-14474475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 121
               

               
Conread position:
               
253-532
               

               
Cow position:
               
chr15:31137589-31137312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
139, 98
               

               
Conread position:
               
253-532
               

               
Cow position:
               
chr15:42888959-42888684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
98, 132
               

               
Conread position:
               
253-532
               

               
Cow position:
               
chr15:44658241-44658510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
19, 89
               

               
Conread position:
               
254-474
               

               
Cow position:
               
chr15:2931694-2931468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
85, 102
               

               
Conread position:
               
254-494
               

               
Cow position:
               
chr15:38652726-38652482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
99, 131
               

               
Conread position:
               
254-532
               

               
Cow position:
               
chr15:17762783-17763061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
26, 177
               

               
Conread position:
               
254-534
               

               
Cow position:
               
chr15:16261208-16261469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
206, 17
               

               
Conread position:
               
255-437
               

               
Cow position:
               
chr15:840269-840089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
256-532
               

               
Cow position:
               
chr15:4694629-4694899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
24, 29
               

               
Conread position:
               
260-500
               

               
Cow position:
               
chr15:43626347-43626595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
260-530
               

               
Cow position:
               
chr15:24616450-24616723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 108
               

               
Conread position:
               
261-528
               

               
Cow position:
               
chr15:20459429-20459155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 208
               

               
Conread position:
               
262-435
               

               
Cow position:
               
chr15:18704048-18703878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
262-453
               

               
Cow position:
               
chr15:46284033-46283842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
10, 90
               

               
Conread position:
               
262-458
               

               
Cow position:
               
chr15:848532-848727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
166, 36
               

               
Conread position:
               
262-488
               

               
Cow position:
               
chr15:49131942-49132170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
11, 79
               

               
Conread position:
               
262-494
               

               
Cow position:
               
chr15:31495333-31495105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
203, 75
               

               
Conread position:
               
262-504
               

               
Cow position:
               
chr15:21822042-21821795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
71, 122
               

               
Conread position:
               
262-528
               

               
Cow position:
               
chr15:34284522-34284261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
135, 22
               

               
Conread position:
               
262-532
               

               
Cow position:
               
chr15:36846302-36846021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
84, 178
               

               
Conread position:
               
262-532
               

               
Cow position:
               
chr15:36952314-36952046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
198, 36
               

               
Conread position:
               
262-534
               

               
Cow position:
               
chr15:1722956-1722693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
195, 75
               

               
Conread position:
               
265-528
               

               
Cow position:
               
chr15:662576-662319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
113, 72
               

               
Conread position:
               
265-532
               

               
Cow position:
               
chr15:3700397-3700132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 87
               

               
Conread position:
               
265-534
               

               
Cow position:
               
chr15:275531-275807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 172
               

               
Conread position:
               
266-428
               

               
Cow position:
               
chr15:10199222-10199379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
266-435
               

               
Cow position:
               
chr15:26849643-26849480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
266-435
               

               
Cow position:
               
chr15:49483515-49483685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
87, 102
               

               
Conread position:
               
266-458
               

               
Cow position:
               
chr15:28099000-28099192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
7, 33
               

               
Conread position:
               
266-470
               

               
Cow position:
               
chr15:10153560-10153759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
87, 153
               

               
Conread position:
               
266-479
               

               
Cow position:
               
chr15:11909058-11908848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
194, 145
               

               
Conread position:
               
266-481
               

               
Cow position:
               
chr15:50332864-50333085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
68, 98
               

               
Conread position:
               
266-485
               

               
Cow position:
               
chr15:36887728-36887944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
194, 84
               

               
Conread position:
               
266-498
               

               
Cow position:
               
chr15:17870403-17870158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
266-528
               

               
Cow position:
               
chr15:10457139-10456863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 166
               

               
Conread position:
               
266-528
               

               
Cow position:
               
chr15:38827426-38827175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
189, 61
               

               
Conread position:
               
266-532
               

               
Cow position:
               
chr15:10442622-10442350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 198
               

               
Conread position:
               
266-532
               

               
Cow position:
               
chr15:22553652-22553385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
192, 92
               

               
Conread position:
               
266-532
               

               
Cow position:
               
chr15:36259708-36259449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
193, 55
               

               
Conread position:
               
266-534
               

               
Cow position:
               
chr15:16112283-16112557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
66, 131
               

               
Conread position:
               
267-507
               

               
Cow position:
               
chr15:47844198-47843962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
193, 25
               

               
Conread position:
               
267-532
               

               
Cow position:
               
chr15:12304529-12304795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
193, 94
               

               
Conread position:
               
267-532
               

               
Cow position:
               
chr15:49784391-49784131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
190, 85
               

               
Conread position:
               
267-534
               

               
Cow position:
               
chr15:14987885-14988147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
193, 77
               

               
Conread position:
               
268-500
               

               
Cow position:
               
chr15:53716325-53716558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
191, 100
               

               
Conread position:
               
269-448
               

               
Cow position:
               
chr15:5690994-5691168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
270-532
               

               
Cow position:
               
chr15:47042750-47042474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
34, 247
               

               
Conread position:
               
271-480
               

               
Cow position:
               
chr15:14964266-14964065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
192, 90
               

               
Conread position:
               
271-503
               

               
Cow position:
               
chr15:27063623-27063394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
189, 23
               

               
Conread position:
               
271-532
               

               
Cow position:
               
chr15:3695531-3695788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
185, 63
               

               
Conread position:
               
271-534
               

               
Cow position:
               
chr15:24994617-24994358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
189, 23
               

               
Conread position:
               
279-509
               

               
Cow position:
               
chr15:25906820-25907042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
181, 62
               

               
Conread position:
               
279-529
               

               
Cow position:
               
chr15:5420980-5420730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
158, 62
               

               
Conread position:
               
279-532
               

               
Cow position:
               
chr15:33306022-33306263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
181, 28
               

               
Conread position:
               
281-532
               

               
Cow position:
               
chr15:8353945-8354197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
179, 77
               

               
Conread position:
               
281-532
               

               
Cow position:
               
chr15:14888733-14888487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
179, 53
               

               
Conread position:
               
284-534
               

               
Cow position:
               
chr15:23696995-23696755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
136, 48
               

               
Conread position:
               
287-534
               

               
Cow position:
               
chr15:33643001-33643248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
124, 76
               

               
Conread position:
               
326-532
               

               
Cow position:
               
chr15:6530898-6530694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
134, 27
               

               
Conread position:
               
333-531
               

               
Cow position:
               
chr15:26718965-26718768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
127, 94
               

               
Conread position:
               
345-491
               

               
Cow position:
               
chr15:16307390-16307537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
115, 9
               

               
Conread position:
               
349-532
               

               
Cow position:
               
chr15:44237388-44237572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
110, 143
               

               
Conread position:
               
353-532
               

               
Cow position:
               
chr15:46868739-46868558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
106, 48
               
Show alignments to all cow chromosomes.