Cow genome map

Conread name: Pig1-57C11

Conread position: 2-160
Cow position: chr20:5483996-5483837 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 41

Conread position: 2-182
Cow position: chr20:28160586-28160403 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 26, 159

Conread position: 2-183
Cow position: chr20:4799840-4800023 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 24, 95

Conread position: 2-195
Cow position: chr20:8313628-8313822 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 25, 156

Conread position: 2-204
Cow position: chr20:12438956-12439159 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 158
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 26, 152

Conread position: 2-204
Cow position: chr20:18315774-18315979 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 162
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 24, 62

Conread position: 2-236
Cow position: chr20:15064574-15064322 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 188
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 26, 0

Conread position: 2-237
Cow position: chr20:5534747-5534507 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 159

Conread position: 2-237
Cow position: chr20:23798687-23798442 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 187
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 26, 62

Conread position: 2-237
Cow position: chr20:25851185-25851426 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 184
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 26, 159

Conread position: 2-237
Cow position: chr20:29947991-29947745 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 186
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 26, 159

Conread position: 2-237
Cow position: chr20:30684144-30683898 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 185
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 26, 90

Conread position: 2-242
Cow position: chr20:7116665-7116917 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 188
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 26, 159

Conread position: 2-249
Cow position: chr20:19437763-19437512 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 26, 62

Conread position: 2-264
Cow position: chr20:10102741-10103011 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 27, 50

Conread position: 3-159
Cow position: chr20:3270522-3270367 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 111, 25

Conread position: 3-160
Cow position: chr20:28565796-28565957 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 27, 0

Conread position: 3-183
Cow position: chr20:10846274-10846454 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 26, 154

Conread position: 3-190
Cow position: chr20:24614354-24614165 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 23, 158

Conread position: 3-194
Cow position: chr20:3032742-3032547 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 23, 170

Conread position: 3-212
Cow position: chr20:8004709-8004919 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 162
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 25, 158

Conread position: 3-237
Cow position: chr20:21914130-21913898 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 25, 89

Conread position: 3-237
Cow position: chr20:23469856-23470101 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 25, 158

Conread position: 3-244
Cow position: chr20:13762710-13762461 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 190
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 25, 158

Conread position: 3-249
Cow position: chr20:11276489-11276724 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 25, 56

Conread position: 3-249
Cow position: chr20:31124210-31123953 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 25, 165

Conread position: 4-263
Cow position: chr20:21393376-21393105 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 190
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 24, 157

Conread position: 8-233
Cow position: chr20:28593543-28593309 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 171
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 20, 56

Conread position: 10-205
Cow position: chr20:15098073-15098272 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 38

Conread position: 10-237
Cow position: chr20:27868994-27868757 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 18, 150

Conread position: 10-249
Cow position: chr20:822547-822305 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 182
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 39

Conread position: 12-307
Cow position: chr20:15291843-15291534 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 217
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 16, 149

Conread position: 27-308
Cow position: chr20:35119026-35118736 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 208
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 84, 64

Conread position: 31-157
Cow position: chr20:19005854-19005980 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 46

Conread position: 40-259
Cow position: chr20:22206300-22206072 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 22, 119

Conread position: 52-249
Cow position: chr20:13681330-13681527 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 157
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 62, 118

Conread position: 222-467
Cow position: chr20:27315264-27315023 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 164
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 131

Conread position: 226-532
Cow position: chr20:28982981-28982677 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 221
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 6, 15

Conread position: 226-534
Cow position: chr20:7756352-7756648 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 25, 75

Conread position: 231-488
Cow position: chr20:2204407-2204665 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 37, 123

Conread position: 231-532
Cow position: chr20:12126021-12126326 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 31, 11

Conread position: 233-532
Cow position: chr20:11548452-11548743 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 203
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 13, 30

Conread position: 236-532
Cow position: chr20:15548619-15548922 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 32, 14

Conread position: 248-467
Cow position: chr20:26040836-26041057 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 212, 0

Conread position: 248-494
Cow position: chr20:35444844-35445090 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 166
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 7, 51

Conread position: 250-448
Cow position: chr20:26387712-26387522 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 192, 13

Conread position: 250-503
Cow position: chr20:26996792-26996536 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 182
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 98, 16

Conread position: 250-532
Cow position: chr20:5078895-5078602 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 196
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 83, 263

Conread position: 251-500
Cow position: chr20:7425936-7426188 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 19, 105

Conread position: 251-507
Cow position: chr20:23846409-23846663 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 167, 14

Conread position: 251-531
Cow position: chr20:38515047-38514761 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 205
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 104, 144

Conread position: 251-532
Cow position: chr20:11611940-11611662 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 185
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 21, 131

Conread position: 252-427
Cow position: chr20:23358238-23358411 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 93, 19

Conread position: 252-512
Cow position: chr20:11002661-11002394 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 183
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 75, 83

Conread position: 252-534
Cow position: chr20:7624004-7624272 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 193
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 208, 14

Conread position: 253-442
Cow position: chr20:24491772-24491960 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 144, 18

Conread position: 253-534
Cow position: chr20:398059-398328 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 196
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 207, 10

Conread position: 253-534
Cow position: chr20:39417646-39417919 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 190
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 32

Conread position: 254-532
Cow position: chr20:7737977-7738248 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 204
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 12, 95

Conread position: 254-532
Cow position: chr20:24070055-24069782 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 197
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 207, 16

Conread position: 255-531
Cow position: chr20:17251974-17251695 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 125

Conread position: 258-445
Cow position: chr20:27323520-27323331 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 95, 132

Conread position: 260-435
Cow position: chr20:22012638-22012471 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 261-532
Cow position: chr20:7438607-7438875 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 80

Conread position: 261-532
Cow position: chr20:12581708-12581978 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 91

Conread position: 262-455
Cow position: chr20:6473982-6473788 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 135
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 107, 131

Conread position: 262-458
Cow position: chr20:19834584-19834778 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 60, 0

Conread position: 262-500
Cow position: chr20:2819795-2819553 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 67, 219

Conread position: 262-507
Cow position: chr20:2298550-2298785 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 198, 16

Conread position: 262-522
Cow position: chr20:25953514-25953255 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 89, 120

Conread position: 262-532
Cow position: chr20:4755587-4755853 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 182
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 142, 106

Conread position: 262-532
Cow position: chr20:14807133-14806864 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 196
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 10, 93

Conread position: 265-534
Cow position: chr20:32847587-32847318 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 196
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 10, 80

Conread position: 266-409
Cow position: chr20:11368120-11368261 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 10, 87

Conread position: 266-443
Cow position: chr20:16977594-16977777 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 73, 0

Conread position: 266-496
Cow position: chr20:15766359-15766123 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 168
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 25, 232

Conread position: 266-526
Cow position: chr20:31739974-31740237 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 116, 28

Conread position: 266-527
Cow position: chr20:40422855-40423119 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 178
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 75, 210

Conread position: 266-531
Cow position: chr20:18379620-18379355 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 191
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 194, 84

Conread position: 266-534
Cow position: chr20:8578498-8578224 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 26, 235

Conread position: 266-534
Cow position: chr20:13269857-13269597 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 194, 68

Conread position: 267-483
Cow position: chr20:3564395-3564185 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 53

Conread position: 267-532
Cow position: chr20:12420377-12420641 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 188
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 193, 91

Conread position: 267-532
Cow position: chr20:39398724-39398464 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 193, 219

Conread position: 268-419
Cow position: chr20:23506177-23506026 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 83, 9

Conread position: 268-500
Cow position: chr20:3255275-3255047 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 170
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 115, 73

Conread position: 269-494
Cow position: chr20:25009393-25009617 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 191, 85

Conread position: 271-510
Cow position: chr20:3148919-3148684 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 189, 42

Conread position: 272-516
Cow position: chr20:14880023-14879781 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 165
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 121, 76

Conread position: 281-428
Cow position: chr20:12033398-12033542 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 137, 17

Conread position: 284-467
Cow position: chr20:20590079-20590257 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 301-532
Cow position: chr20:17100567-17100339 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 13, 52

Conread position: 305-531
Cow position: chr20:20203418-20203195 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 156, 47

Conread position: 307-534
Cow position: chr20:32463323-32463545 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 47, 0

Conread position: 335-518
Cow position: chr20:9412664-9412478 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 6, 60

Conread position: 358-532
Cow position: chr20:39266806-39266980 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 86

Conread position: 359-534
Cow position: chr20:19363212-19363389 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 101, 28

Show alignments to all cow chromosomes.