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Cow genome map

           
Conread name:
           
Pig1-57C11
        

               
Conread position:
               
2-192
               

               
Cow position:
               
chr22:41419932-41420126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
24, 168
               

               
Conread position:
               
2-197
               

               
Cow position:
               
chr22:118064-118262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 171
               

               
Conread position:
               
2-212
               

               
Cow position:
               
chr22:44395533-44395322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 158
               

               
Conread position:
               
2-218
               

               
Cow position:
               
chr22:31335281-31335506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr22:526158-526377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
24, 42
               

               
Conread position:
               
2-236
               

               
Cow position:
               
chr22:42771299-42771075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
26, 165
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr22:17328988-17329231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
26, 164
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr22:34168083-34167837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr22:42990923-42990681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr22:44457065-44456817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
37, 161
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr22:18476011-18476256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 67
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr22:44933731-44933477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
26, 159
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr22:10910100-10910361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
26, 166
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr22:24949581-24949323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
26, 166
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr22:35672604-35672862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
26, 170
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr22:44369866-44370120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
26, 58
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr22:1285180-1285443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 157
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr22:3306975-3307225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
186, 26
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr22:8136445-8136709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
24, 32
               

               
Conread position:
               
2-256
               

               
Cow position:
               
chr22:39882421-39882666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
24, 166
               

               
Conread position:
               
2-274
               

               
Cow position:
               
chr22:39469766-39470046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
26, 157
               

               
Conread position:
               
3-166
               

               
Cow position:
               
chr22:36861780-36861947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
3-199
               

               
Cow position:
               
chr22:1319146-1318948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
25, 159
               

               
Conread position:
               
3-218
               

               
Cow position:
               
chr22:560949-561174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
25, 146
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr22:6985005-6984748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
25, 165
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr22:13772541-13772288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
25, 47
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr22:27310026-27310283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
25, 157
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr22:37265205-37264947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 168
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr22:36534213-36534458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
23, 159
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr22:36736520-36736278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr22:37067160-37067399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 158
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr22:37131403-37131155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
25, 167
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr22:21589083-21588809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
25, 158
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr22:31313095-31312815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
25, 166
               

               
Conread position:
               
4-195
               

               
Cow position:
               
chr22:46635948-46636138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
110, 24
               

               
Conread position:
               
4-196
               

               
Cow position:
               
chr22:44353198-44353394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
24, 157
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr22:46585562-46585772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 156
               

               
Conread position:
               
4-237
               

               
Cow position:
               
chr22:5672488-5672266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 159
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr22:327399-327654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
24, 157
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr22:5307867-5307610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
7-263
               

               
Cow position:
               
chr22:1321362-1321114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
21, 68
               

               
Conread position:
               
8-249
               

               
Cow position:
               
chr22:7277268-7277021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
18, 156
               

               
Conread position:
               
10-237
               

               
Cow position:
               
chr22:19143954-19144192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
18, 151
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr22:3278610-3278856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
23, 67
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr22:5233558-5233803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
57, 66
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr22:10546394-10546144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
18, 158
               

               
Conread position:
               
10-258
               

               
Cow position:
               
chr22:44489634-44489371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
18, 154
               

               
Conread position:
               
11-249
               

               
Cow position:
               
chr22:15851084-15850839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 99
               

               
Conread position:
               
11-255
               

               
Cow position:
               
chr22:1293751-1294002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
15, 42
               

               
Conread position:
               
15-161
               

               
Cow position:
               
chr22:18816643-18816793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
15-257
               

               
Cow position:
               
chr22:16200233-16199979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 153
               

               
Conread position:
               
32-249
               

               
Cow position:
               
chr22:693361-693135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 136
               

               
Conread position:
               
39-237
               

               
Cow position:
               
chr22:40380911-40380723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
75, 20
               

               
Conread position:
               
39-256
               

               
Cow position:
               
chr22:1270794-1271011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
73, 13
               

               
Conread position:
               
41-213
               

               
Cow position:
               
chr22:36180856-36180684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
73, 40
               

               
Conread position:
               
41-252
               

               
Cow position:
               
chr22:11030681-11030479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
17, 50
               

               
Conread position:
               
46-249
               

               
Cow position:
               
chr22:12732354-12732562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
66, 6
               

               
Conread position:
               
46-256
               

               
Cow position:
               
chr22:45880415-45880619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
204, 13
               

               
Conread position:
               
49-256
               

               
Cow position:
               
chr22:6503953-6504161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
65, 76
               

               
Conread position:
               
49-256
               

               
Cow position:
               
chr22:44609343-44609129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
53, 46
               

               
Conread position:
               
69-238
               

               
Cow position:
               
chr22:27386703-27386882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 98
               

               
Conread position:
               
206-530
               

               
Cow position:
               
chr22:1984111-1983786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
142, 9
               

               
Conread position:
               
211-534
               

               
Cow position:
               
chr22:21527159-21526849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
248, 21
               

               
Conread position:
               
229-478
               

               
Cow position:
               
chr22:26233867-26233616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
124, 113
               

               
Conread position:
               
233-492
               

               
Cow position:
               
chr22:1714638-1714896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
120, 18
               

               
Conread position:
               
235-532
               

               
Cow position:
               
chr22:16533297-16533008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
107, 11
               

               
Conread position:
               
239-419
               

               
Cow position:
               
chr22:5778855-5779041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
33, 7
               

               
Conread position:
               
240-534
               

               
Cow position:
               
chr22:34441409-34441708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
30, 39
               

               
Conread position:
               
242-532
               

               
Cow position:
               
chr22:15490879-15490587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 143
               

               
Conread position:
               
244-495
               

               
Cow position:
               
chr22:44741287-44741045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
216, 21
               

               
Conread position:
               
248-492
               

               
Cow position:
               
chr22:243314-243082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
209, 13
               

               
Conread position:
               
248-531
               

               
Cow position:
               
chr22:4075669-4075956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
20, 248
               

               
Conread position:
               
249-503
               

               
Cow position:
               
chr22:43965919-43965664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 138
               

               
Conread position:
               
249-518
               

               
Cow position:
               
chr22:2100734-2101001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 93
               

               
Conread position:
               
250-459
               

               
Cow position:
               
chr22:39471940-39472153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
16, 136
               

               
Conread position:
               
250-485
               

               
Cow position:
               
chr22:17120666-17120430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
113, 126
               

               
Conread position:
               
250-530
               

               
Cow position:
               
chr22:39507828-39508108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
207, 16
               

               
Conread position:
               
250-532
               

               
Cow position:
               
chr22:11131078-11130800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
215, 13
               

               
Conread position:
               
251-399
               

               
Cow position:
               
chr22:1625759-1625909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
251-422
               

               
Cow position:
               
chr22:10594822-10594650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 17
               

               
Conread position:
               
251-427
               

               
Cow position:
               
chr22:30684936-30684765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
251-427
               

               
Cow position:
               
chr22:33031018-33030835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
251-451
               

               
Cow position:
               
chr22:10351178-10350973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
20, 134
               

               
Conread position:
               
251-485
               

               
Cow position:
               
chr22:26112576-26112343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
95, 14
               

               
Conread position:
               
251-494
               

               
Cow position:
               
chr22:12902645-12902880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
209, 20
               

               
Conread position:
               
251-495
               

               
Cow position:
               
chr22:33522665-33522908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
100, 134
               

               
Conread position:
               
251-518
               

               
Cow position:
               
chr22:37947934-37947669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
251-522
               

               
Cow position:
               
chr22:18099831-18099559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 131
               

               
Conread position:
               
251-530
               

               
Cow position:
               
chr22:2404093-2403810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 102
               

               
Conread position:
               
251-532
               

               
Cow position:
               
chr22:15950178-15950451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
209, 50
               

               
Conread position:
               
251-532
               

               
Cow position:
               
chr22:17652645-17652365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
20, 91
               

               
Conread position:
               
251-533
               

               
Cow position:
               
chr22:2123504-2123226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
15, 93
               

               
Conread position:
               
251-533
               

               
Cow position:
               
chr22:23115095-23115379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
99, 35
               

               
Conread position:
               
251-534
               

               
Cow position:
               
chr22:4357295-4357025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
177, 46
               

               
Conread position:
               
251-534
               

               
Cow position:
               
chr22:15567810-15568088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 97
               

               
Conread position:
               
252-435
               

               
Cow position:
               
chr22:1105415-1105595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
252-458
               

               
Cow position:
               
chr22:6709581-6709785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
252-492
               

               
Cow position:
               
chr22:8412737-8412495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
252-500
               

               
Cow position:
               
chr22:12929067-12929317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
99, 132
               

               
Conread position:
               
252-508
               

               
Cow position:
               
chr22:33985597-33985844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
64, 19
               

               
Conread position:
               
252-531
               

               
Cow position:
               
chr22:24903801-24903522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
165, 19
               

               
Conread position:
               
252-532
               

               
Cow position:
               
chr22:10122576-10122309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
208, 11
               

               
Conread position:
               
252-532
               

               
Cow position:
               
chr22:21568202-21567929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
92, 50
               

               
Conread position:
               
252-534
               

               
Cow position:
               
chr22:33399281-33399554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
190, 13
               

               
Conread position:
               
253-407
               

               
Cow position:
               
chr22:29546846-29546696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
253-427
               

               
Cow position:
               
chr22:33565885-33566057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
253-440
               

               
Cow position:
               
chr22:13951471-13951287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
253-484
               

               
Cow position:
               
chr22:21905678-21905450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
56, 91
               

               
Conread position:
               
253-517
               

               
Cow position:
               
chr22:4563566-4563308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
174, 79
               

               
Conread position:
               
253-521
               

               
Cow position:
               
chr22:21601314-21601593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
88, 132
               

               
Conread position:
               
253-527
               

               
Cow position:
               
chr22:36133008-36132733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
103, 137
               

               
Conread position:
               
253-532
               

               
Cow position:
               
chr22:32892903-32892625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
98, 10
               

               
Conread position:
               
253-532
               

               
Cow position:
               
chr22:36432764-36433041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
88, 18
               

               
Conread position:
               
254-518
               

               
Cow position:
               
chr22:42635220-42635489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
18, 136
               

               
Conread position:
               
254-532
               

               
Cow position:
               
chr22:4060739-4061014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 99
               

               
Conread position:
               
254-534
               

               
Cow position:
               
chr22:13957437-13957717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
206, 17
               

               
Conread position:
               
255-404
               

               
Cow position:
               
chr22:13891784-13891635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
6, 98
               

               
Conread position:
               
255-532
               

               
Cow position:
               
chr22:16094698-16094970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 97
               

               
Conread position:
               
256-518
               

               
Cow position:
               
chr22:10162173-10161908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
204, 9
               

               
Conread position:
               
257-423
               

               
Cow position:
               
chr22:1304350-1304512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
258-480
               

               
Cow position:
               
chr22:2876591-2876816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
14, 88
               

               
Conread position:
               
259-477
               

               
Cow position:
               
chr22:16813998-16813783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
201, 12
               

               
Conread position:
               
260-467
               

               
Cow position:
               
chr22:8327943-8327741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
53, 11
               

               
Conread position:
               
260-488
               

               
Cow position:
               
chr22:27171067-27171292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
153, 11
               

               
Conread position:
               
260-532
               

               
Cow position:
               
chr22:16541446-16541720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
79, 134
               

               
Conread position:
               
260-534
               

               
Cow position:
               
chr22:28071760-28071487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
60, 18
               

               
Conread position:
               
261-469
               

               
Cow position:
               
chr22:24890423-24890217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
11, 92
               

               
Conread position:
               
261-532
               

               
Cow position:
               
chr22:2109427-2109691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
12, 84
               

               
Conread position:
               
261-534
               

               
Cow position:
               
chr22:6327572-6327843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
119, 37
               

               
Conread position:
               
262-488
               

               
Cow position:
               
chr22:4656845-4657069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
116, 88
               

               
Conread position:
               
262-527
               

               
Cow position:
               
chr22:19459842-19460113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
9, 120
               

               
Conread position:
               
262-530
               

               
Cow position:
               
chr22:1659368-1659095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
94, 37
               

               
Conread position:
               
262-530
               

               
Cow position:
               
chr22:17152890-17152613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
11, 241
               

               
Conread position:
               
262-530
               

               
Cow position:
               
chr22:40048759-40048487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
89, 169
               

               
Conread position:
               
262-532
               

               
Cow position:
               
chr22:14214166-14214431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
262-532
               

               
Cow position:
               
chr22:17852437-17852703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
198, 90
               

               
Conread position:
               
263-532
               

               
Cow position:
               
chr22:1591220-1590955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
26, 63
               

               
Conread position:
               
265-494
               

               
Cow position:
               
chr22:35215749-35215516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
88, 120
               

               
Conread position:
               
265-496
               

               
Cow position:
               
chr22:4560611-4560853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
110, 103
               

               
Conread position:
               
265-518
               

               
Cow position:
               
chr22:22613300-22613050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
194, 70
               

               
Conread position:
               
266-419
               

               
Cow position:
               
chr22:12207511-12207661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
266-446
               

               
Cow position:
               
chr22:17746016-17745831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
48, 94
               

               
Conread position:
               
266-449
               

               
Cow position:
               
chr22:9735465-9735284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
266-477
               

               
Cow position:
               
chr22:7584046-7584251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
194, 39
               

               
Conread position:
               
266-500
               

               
Cow position:
               
chr22:37202045-37201811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
76, 87
               

               
Conread position:
               
266-507
               

               
Cow position:
               
chr22:18259413-18259177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
193, 72
               

               
Conread position:
               
266-525
               

               
Cow position:
               
chr22:10416423-10416165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
266-527
               

               
Cow position:
               
chr22:30999087-30998821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
266-528
               

               
Cow position:
               
chr22:10338909-10339181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
68, 180
               

               
Conread position:
               
266-532
               

               
Cow position:
               
chr22:3250783-3251061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
39, 251
               

               
Conread position:
               
266-532
               

               
Cow position:
               
chr22:5616492-5616240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
194, 12
               

               
Conread position:
               
266-532
               

               
Cow position:
               
chr22:11613623-11613357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
20, 215
               

               
Conread position:
               
266-532
               

               
Cow position:
               
chr22:12316005-12315744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 63
               

               
Conread position:
               
266-532
               

               
Cow position:
               
chr22:18020834-18021097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
87, 47
               

               
Conread position:
               
266-534
               

               
Cow position:
               
chr22:285170-285429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
266-534
               

               
Cow position:
               
chr22:8138058-8138336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
85, 247
               

               
Conread position:
               
266-534
               

               
Cow position:
               
chr22:26339961-26339684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 235
               

               
Conread position:
               
266-534
               

               
Cow position:
               
chr22:38438961-38439228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
79, 32
               

               
Conread position:
               
267-488
               

               
Cow position:
               
chr22:33485429-33485641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
151, 34
               

               
Conread position:
               
267-503
               

               
Cow position:
               
chr22:43398195-43397960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
193, 40
               

               
Conread position:
               
267-516
               

               
Cow position:
               
chr22:6720885-6721132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
193, 85
               

               
Conread position:
               
267-531
               

               
Cow position:
               
chr22:10295224-10294970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
193, 75
               

               
Conread position:
               
267-532
               

               
Cow position:
               
chr22:6176086-6176358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
66, 188
               

               
Conread position:
               
267-532
               

               
Cow position:
               
chr22:28371127-28370875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
193, 85
               

               
Conread position:
               
267-532
               

               
Cow position:
               
chr22:30818405-30818137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
193, 72
               

               
Conread position:
               
267-534
               

               
Cow position:
               
chr22:17949781-17950039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
37, 76
               

               
Conread position:
               
268-467
               

               
Cow position:
               
chr22:4628757-4628548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
268-474
               

               
Cow position:
               
chr22:11189225-11189020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
110, 95
               

               
Conread position:
               
268-532
               

               
Cow position:
               
chr22:18838445-18838182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
157, 83
               

               
Conread position:
               
268-532
               

               
Cow position:
               
chr22:28639961-28640218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
192, 43
               

               
Conread position:
               
268-534
               

               
Cow position:
               
chr22:1350027-1349753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 84
               

               
Conread position:
               
268-534
               

               
Cow position:
               
chr22:44717915-44717642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
186, 84
               

               
Conread position:
               
269-532
               

               
Cow position:
               
chr22:1588489-1588225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
124, 119
               

               
Conread position:
               
269-532
               

               
Cow position:
               
chr22:9127592-9127338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
191, 36
               

               
Conread position:
               
269-532
               

               
Cow position:
               
chr22:14178638-14178893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
165, 73
               

               
Conread position:
               
270-532
               

               
Cow position:
               
chr22:41898256-41898515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 95
               

               
Conread position:
               
270-534
               

               
Cow position:
               
chr22:1651682-1651423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
158, 79
               

               
Conread position:
               
271-503
               

               
Cow position:
               
chr22:14141149-14141383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
189, 0
               

               
Conread position:
               
271-531
               

               
Cow position:
               
chr22:19827669-19827931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 45
               

               
Conread position:
               
271-533
               

               
Cow position:
               
chr22:10936657-10936907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
89, 27
               

               
Conread position:
               
271-534
               

               
Cow position:
               
chr22:12803196-12803457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
189, 69
               

               
Conread position:
               
272-532
               

               
Cow position:
               
chr22:14245247-14245512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 123
               

               
Conread position:
               
275-426
               

               
Cow position:
               
chr22:18145723-18145574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
275-459
               

               
Cow position:
               
chr22:28493093-28493274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
88, 122
               

               
Conread position:
               
275-531
               

               
Cow position:
               
chr22:45808017-45807773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
185, 27
               

               
Conread position:
               
276-440
               

               
Cow position:
               
chr22:15006925-15007087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
276-506
               

               
Cow position:
               
chr22:10532680-10532456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
184, 62
               

               
Conread position:
               
279-532
               

               
Cow position:
               
chr22:10631572-10631316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
125, 45
               

               
Conread position:
               
279-534
               

               
Cow position:
               
chr22:7882734-7882483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
181, 49
               

               
Conread position:
               
294-530
               

               
Cow position:
               
chr22:29289980-29290207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
166, 29
               

               
Conread position:
               
303-529
               

               
Cow position:
               
chr22:4119403-4119629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
156, 50
               

               
Conread position:
               
303-532
               

               
Cow position:
               
chr22:1067754-1067981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
157, 6
               

               
Conread position:
               
304-532
               

               
Cow position:
               
chr22:9171566-9171337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
156, 37
               

               
Conread position:
               
333-532
               

               
Cow position:
               
chr22:21295594-21295794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
127, 99
               

               
Conread position:
               
333-534
               

               
Cow position:
               
chr22:1871229-1871025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
345-500
               

               
Cow position:
               
chr22:4149536-4149384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
354-532
               

               
Cow position:
               
chr22:25387437-25387254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
359-532
               

               
Cow position:
               
chr22:4645876-4645705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
101, 17
               
Show alignments to all cow chromosomes.