Cow genome map
| Conread name: | Pig1-57C11 |
| Conread position: | 2-210 |
| Cow position: | chr26:20254885-20254678 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 2-237 |
| Cow position: | chr26:3691622-3691393 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 24, 167 |
| Conread position: | 2-241 |
| Cow position: | chr26:9112281-9112031 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 26, 166 |
| Conread position: | 2-244 |
| Cow position: | chr26:9563543-9563797 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 194 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 2-249 |
| Cow position: | chr26:11254242-11254504 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 13, 175 |
| Conread position: | 2-256 |
| Cow position: | chr26:9846319-9846579 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 197 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 24, 172 |
| Conread position: | 3-177 |
| Cow position: | chr26:6850360-6850537 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 25, 158 |
| Conread position: | 3-212 |
| Cow position: | chr26:5674981-5674773 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 25, 163 |
| Conread position: | 3-234 |
| Cow position: | chr26:34012834-34012596 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 185 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 25, 159 |
| Conread position: | 3-237 |
| Cow position: | chr26:12574579-12574806 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 23, 166 |
| Conread position: | 3-237 |
| Cow position: | chr26:19351700-19351944 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 25, 7 |
| Conread position: | 3-249 |
| Cow position: | chr26:2352544-2352791 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 61 |
| Conread position: | 3-249 |
| Cow position: | chr26:19998301-19998044 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 25, 165 |
| Conread position: | 3-249 |
| Cow position: | chr26:24201436-24201179 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 25, 165 |
| Conread position: | 3-250 |
| Cow position: | chr26:8869691-8869435 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 25, 165 |
| Conread position: | 4-196 |
| Cow position: | chr26:4605369-4605562 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 110, 43 |
| Conread position: | 8-235 |
| Cow position: | chr26:20262658-20262439 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 18, 56 |
| Conread position: | 10-237 |
| Cow position: | chr26:17397123-17397367 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 10-249 |
| Cow position: | chr26:3031002-3031252 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 18, 158 |
| Conread position: | 10-249 |
| Cow position: | chr26:12588758-12589003 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 18, 39 |
| Conread position: | 10-249 |
| Cow position: | chr26:30782575-30782326 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 18, 61 |
| Conread position: | 16-289 |
| Cow position: | chr26:30590439-30590721 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 12, 145 |
| Conread position: | 24-237 |
| Cow position: | chr26:35150080-35150282 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 35 |
| Conread position: | 32-254 |
| Cow position: | chr26:19142505-19142284 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 82, 29 |
| Conread position: | 33-249 |
| Cow position: | chr26:8918763-8918544 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 81, 30 |
| Conread position: | 40-226 |
| Cow position: | chr26:12655737-12655540 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 246-534 |
| Cow position: | chr26:14175525-14175231 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 105, 20 |
| Conread position: | 247-458 |
| Cow position: | chr26:13862806-13863008 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 45, 15 |
| Conread position: | 247-534 |
| Cow position: | chr26:9492154-9491874 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 217, 105 |
| Conread position: | 248-463 |
| Cow position: | chr26:34114497-34114283 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 111, 18 |
| Conread position: | 248-523 |
| Cow position: | chr26:32830317-32830044 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 91, 23 |
| Conread position: | 248-534 |
| Cow position: | chr26:19446369-19446075 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 216 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 81, 18 |
| Conread position: | 251-474 |
| Cow position: | chr26:16795978-16796198 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 77 |
| Conread position: | 251-485 |
| Cow position: | chr26:33242127-33241886 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 26, 74 |
| Conread position: | 251-531 |
| Cow position: | chr26:19459928-19459638 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 196 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 54, 95 |
| Conread position: | 251-532 |
| Cow position: | chr26:19110404-19110135 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 206, 14 |
| Conread position: | 251-532 |
| Cow position: | chr26:26887904-26888181 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 208 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 22, 103 |
| Conread position: | 252-498 |
| Cow position: | chr26:31854463-31854217 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 149, 106 |
| Conread position: | 252-534 |
| Cow position: | chr26:20291463-20291742 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 20 |
| Conread position: | 253-456 |
| Cow position: | chr26:8811701-8811500 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 100, 10 |
| Conread position: | 253-522 |
| Cow position: | chr26:21418223-21418490 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 57, 112 |
| Conread position: | 253-528 |
| Cow position: | chr26:5836590-5836864 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 100, 10 |
| Conread position: | 253-532 |
| Cow position: | chr26:33201842-33202117 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 207, 18 |
| Conread position: | 254-435 |
| Cow position: | chr26:10502953-10502778 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 129, 45 |
| Conread position: | 254-532 |
| Cow position: | chr26:22892222-22892495 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 206, 9 |
| Conread position: | 256-532 |
| Cow position: | chr26:7687014-7687288 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 17, 100 |
| Conread position: | 259-434 |
| Cow position: | chr26:8896365-8896542 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 104, 126 |
| Conread position: | 262-404 |
| Cow position: | chr26:5307338-5307196 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 103, 16 |
| Conread position: | 262-419 |
| Cow position: | chr26:12891751-12891906 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 94 |
| Conread position: | 262-458 |
| Cow position: | chr26:33038005-33038197 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 262-497 |
| Cow position: | chr26:6714078-6714315 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 71, 123 |
| Conread position: | 262-510 |
| Cow position: | chr26:9099312-9099557 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 9, 86 |
| Conread position: | 262-532 |
| Cow position: | chr26:28251376-28251102 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 11, 57 |
| Conread position: | 263-458 |
| Cow position: | chr26:15132861-15132663 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 8, 108 |
| Conread position: | 265-528 |
| Cow position: | chr26:10764432-10764171 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 88, 112 |
| Conread position: | 265-532 |
| Cow position: | chr26:7148083-7148351 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 98, 227 |
| Conread position: | 266-458 |
| Cow position: | chr26:6487575-6487764 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 266-496 |
| Cow position: | chr26:4584995-4585225 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 191, 151 |
| Conread position: | 266-497 |
| Cow position: | chr26:34610970-34611197 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 194, 72 |
| Conread position: | 266-504 |
| Cow position: | chr26:8307315-8307550 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 194, 31 |
| Conread position: | 266-505 |
| Cow position: | chr26:1328649-1328879 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 194, 28 |
| Conread position: | 266-516 |
| Cow position: | chr26:7314845-7314586 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 266-532 |
| Cow position: | chr26:12964465-12964744 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 70, 172 |
| Conread position: | 266-532 |
| Cow position: | chr26:20260798-20260532 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 105, 92 |
| Conread position: | 266-532 |
| Cow position: | chr26:34724658-34724929 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 199 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 195, 88 |
| Conread position: | 266-534 |
| Cow position: | chr26:21636835-21637090 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 194, 50 |
| Conread position: | 266-534 |
| Cow position: | chr26:23925060-23924797 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 201 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 194, 66 |
| Conread position: | 267-532 |
| Cow position: | chr26:20770066-20769801 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 192, 84 |
| Conread position: | 267-534 |
| Cow position: | chr26:24240895-24240626 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 70, 16 |
| Conread position: | 268-480 |
| Cow position: | chr26:31888944-31888735 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 191, 77 |
| Conread position: | 268-494 |
| Cow position: | chr26:11875010-11875233 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 192, 33 |
| Conread position: | 268-534 |
| Cow position: | chr26:20824908-20825159 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 183, 84 |
| Conread position: | 270-530 |
| Cow position: | chr26:26950249-26950498 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 191, 35 |
| Conread position: | 270-531 |
| Cow position: | chr26:28423498-28423239 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 190, 82 |
| Conread position: | 270-532 |
| Cow position: | chr26:16784039-16783774 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 13, 82 |
| Conread position: | 275-532 |
| Cow position: | chr26:32897672-32897919 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 186, 66 |
| Conread position: | 279-533 |
| Cow position: | chr26:32601559-32601303 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 66, 217 |
| Conread position: | 322-534 |
| Cow position: | chr26:32652572-32652784 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 25, 11 |
| Conread position: | 334-532 |
| Cow position: | chr26:31605556-31605358 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 126, 150 |
| Conread position: | 337-532 |
| Cow position: | chr26:23315921-23315722 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 344-532 |
| Cow position: | chr26:23582806-23582994 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 118, 18 |
Show alignments to all cow chromosomes.